Basic Information

Gene Symbol
ARID5B
Assembly
GCA_932527285.1
Location
CAKOBM010000031.1:1621663-1629722[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-13 1.9e-09 38.0 0.1 2 89 219 293 218 293 0.90

Sequence Information

Coding Sequence
ATGAAAACCAACAAGCACGAAGTCCTAGCCATCAACGATAAGGTGGTCCTGAAAGCCGAGGACCTGCTGAGTTGGATCTGCTCGGGGAGCACGTGGACGTGGGGCATGCGCGCGGTGTGGCGCGGCGCCTGCGCACCTCCCGCCGAGGACAAGGAGACGGCTCCTCTGCATCACACCAAACTGGACTTCAGCGATATCGATAAGGAGAAGAGTACTATTGTGGTGGAACCGGAAGATGCGGATGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGCTACCGCGCGGTGGCGGCGCGGCTGGCGGGGCTGCAGGCGGACTGGCTGCGGGACTCGCTGGTGGCGGCGCTCGGCGGGTACGCCGCGCCCACCACCAACACCAGGATACTTTACTGCAAGGACACATTCGAATACCCCGAGCTGGAGGGTCACGAGTTCGTGTGCAACCACCTGGCTCCGAAGCTGAAGGGTAGGCCTCGCGGGCGACGCCGGCGTCAGCCGCGCTCGCGGACGCAATCTCCAGACTCCAACTCCAGCGACGACGACAAGCCGCAGGAGTATCACACCATTACTCCTCCCTCCGGGCCCCGCCGCCTGTCCCTCCGCAACGGTCCCGAGAAGTCGGCGCCCTCCGACCGGAAGTACATCGCCGAGGAGGAGCGCGACTTCCTGCGACGTCTGAAGCACTTCTACAAGGGCAGAAACGAAGCATTGGAGAAGGCCACCACGTTGAAGCATATATCTCTGAACGCCGTGTACGCGCTGGTGACGTCACGCGGCGGGTACGACACGGTGTGTCGACACAAACTGTGGCGCGTTCTGTTCACCGACCAGCCAGTCTACACGAGGAGACATTACGAACGATACCTGCTGGCGTTTGAGCAGCACGAGCGCCGCAACGGGGCGAAGGCTCCCCCCATCGACACCATCCACGTGCCGGACTCGCCGCGGCGCGACCACAAGCACGAGACCAAACTCAACATCGACTGCGAGACAGGTGAAATAAAGGAGGAGAACACGGTGAGGCAGCCGGCCGCGGACCTGAACCTGCAGTTCCTGGCGTCGATGCCGCACCACCGCGCCAACGGAGTCGCGCTCGACGCCGACAGACACTGGCTCATGGCCAATAAAGGTACGAGCGAGATGCAGAACGAGGTGTCGTTAATGCACCCCCTGCCGGCCCCCCGGCCCCCCTGTCCCCCCGGCCCGCCAGGCCCCCCTGGTCCCCCCGGACCCCCCGCTACTCTCAACGGACATGCCCATAACGGAACACCGCTAGATCTGAAGCCAAATCGTCCAGCGGGACGCAGTTCCCTCCGCGCGGTGCGAGTCAAACCCACACGCCAGAACGCACAGCCCGCCACCGCACCTAACACACCGCCTACCAACTACCCCTTACTAGCGGAGTCCCTCTCGTCGTCTCCGTCCCCCCTGCCCCCCTGCTCGTCAGCCCCCCCCGCGACCCCCTCCGCCCCTCCCATCACCAACTTCGGCATCCATCGCCCCCCCGCGCCGCAAAGTCACAGCGACGACGAGATCGTAGAGGTCCCGTACAAGCCGAAAACGCCAGAAATAATAGACCTCGACGAGTACCCCGAGACGGAGAGCCCCGAGGCCACCACCAAGAAGAAGCGGCTCGACATCCTCAAGGAGCGGGGGCTCGAGGTGACCGCGCTGCCCCCCTGGCCCGTGCCCCCCGTCGCCCCCCTGCTGCTCAACCCGGTGCAGCAGCAGATGATCGCGACGCAGATGTACGGCTACTACACGCCCCCCGTGGTGGTCGCCCCCTCCTACCCCGAGGGCGCGCTGCCCCCCCGCGTCATCCAGGCGACCTCCATCTACGGCTCCTCCAGCCCGGAGAAGACGGTGTACGGCAACCCCAAGGACCCGTTCATGGCGCCCCCGCACAGCCTGCGCGGCGCGCCGCTGCGCCCCCCGCGCGCGCCCCCCTCCGTGCCCCCCGCGCCCCCCGCCGCGCACGACGTGCTCGACCTCACGTGCAAGCCGCCCCCCGCGCCCGCCGTGCGCATCGTGCGCGTGCCCCGCGCCGCCTCGCCCCCCGCGCCGCCCGCCGCGCCCGCCCCCGCCCCCGCCGCGCCGCCGCCCGCCAGCTACTCCATCGTGGACGGCAAGGCGGTGGTGGGCTCCAACCTGGAGATCACGTTGGTGAGCGCGGCGGCGGCGGCGGAGGGCCCGCGCGCCGCAGTGCGCCCGCAGAAGCGCTCCTCGAGCGGCAAGTTCGCGAGCAAGACGCCGACGCCGCCCAAGGAGCCGAAGCTGCCGCGCAAGCCGCCCGCCATCACGGTGCCCACCTACCAGGTGCGCGACGAGTCCTCGCCCCCCGAGGCGCGCGAGGGGCGCGAGGGGCGCAAGGAGCCCCCCAAGCGCGGGCCGATGGCGTCGTTCCTGGACCCGTACATGGCGCTGTACAGCCTGGCGGGGCAGATGGACCCGCGGCACGCGATGGGCGCGGTGGGCGCGATGGGCGCGGTGGACCCGCGACAGCTGGCCGCCTACCGCGACGCCATGGTGGACCAGTTCCGCGGCTACTCGCACCTGCTGAACCTGGGCGTCGCCAACCCCACCACCAAGAATTGA
Protein Sequence
MKTNKHEVLAINDKVVLKAEDLLSWICSGSTWTWGMRAVWRGACAPPAEDKETAPLHHTKLDFSDIDKEKSTIVVEPEDADVVVFSYPRYCRYRAVAARLAGLQADWLRDSLVAALGGYAAPTTNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRQPRSRTQSPDSNSSDDDKPQEYHTITPPSGPRRLSLRNGPEKSAPSDRKYIAEEERDFLRRLKHFYKGRNEALEKATTLKHISLNAVYALVTSRGGYDTVCRHKLWRVLFTDQPVYTRRHYERYLLAFEQHERRNGAKAPPIDTIHVPDSPRRDHKHETKLNIDCETGEIKEENTVRQPAADLNLQFLASMPHHRANGVALDADRHWLMANKGTSEMQNEVSLMHPLPAPRPPCPPGPPGPPGPPGPPATLNGHAHNGTPLDLKPNRPAGRSSLRAVRVKPTRQNAQPATAPNTPPTNYPLLAESLSSSPSPLPPCSSAPPATPSAPPITNFGIHRPPAPQSHSDDEIVEVPYKPKTPEIIDLDEYPETESPEATTKKKRLDILKERGLEVTALPPWPVPPVAPLLLNPVQQQMIATQMYGYYTPPVVVAPSYPEGALPPRVIQATSIYGSSSPEKTVYGNPKDPFMAPPHSLRGAPLRPPRAPPSVPPAPPAAHDVLDLTCKPPPAPAVRIVRVPRAASPPAPPAAPAPAPAAPPPASYSIVDGKAVVGSNLEITLVSAAAAAEGPRAAVRPQKRSSSGKFASKTPTPPKEPKLPRKPPAITVPTYQVRDESSPPEAREGREGRKEPPKRGPMASFLDPYMALYSLAGQMDPRHAMGAVGAMGAVDPRQLAAYRDAMVDQFRGYSHLLNLGVANPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-