Basic Information

Gene Symbol
-
Assembly
GCA_027574965.2
Location
JAODGE020017526.1:623-2164[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 10 1.3e+04 -3.2 0.0 11 30 20 46 17 51 0.62
2 2 4.3e-09 5.6e-06 26.7 0.0 2 42 384 427 384 430 0.94

Sequence Information

Coding Sequence
TTTATTCAAGCGTTCTACGACAAGGTCCAGGACACGCTGGCCATGGAAGACTTCCACAAGTTCATGAACGCCTTGAACGAGTACGATGAGCAgcaaacgccgccgaccgcgctgtataacgccgtcgccgagatCCTCGACGGCAAGCATCCGGAGATTCTCGACGAGTTCCTCCTCTTCTTCGACAGCTTGCAGGCGAAGAGTCTGGGCAAGTTGGTGCCGTACCTGATGCTCAGCAACATGTCGCTGTTCTTGCGCAAGTTGGAAGTCTTCTTTCACGACCAGCCGTCGCAAGTGCGCAAGATTTATCGGGCGATCACCGACctgtcggcgcgctcggaagTGACGATGGCGGAGGTGAAGAGCACCGTCTTGCCGTTGCTAAAAGGTAACGCCCTGCTGAACGACTGGTTCCTGCAAATCTTCCCGATGGAAAAGCCGCCGTCGCGGCTGCTCGACGGCGCGTGGGAGACGATCTGCATGAGcaaggacgccgacgacgactgcgAGAACGCGATATTGCCCGAGGGCGACGACGCCTACGGCGGCTCGAGCTGCGCGTGCGCCTGCCACGCGTCGGAGGACGACGGATTccgggcgcgctcgcagcaCTGCACGCCGTGCGGCATAAAGTATCTGCAGGGCAGGGTGTTCTTCCAAAGCGGCAAGGGCCTGCGTCCGGCGCGCATCACCTTCGACGACAGGAGCGTCGACCACCAGACGCGGCtgtcgccggtcgcgccgaagaagcgcgccgacgccagcCCGCTGAAGGTGATCTCGCCGGGCAAGGACAGCCAGGACGAGGCGCGCCcgagcagcgacgacgagccggACAAGAAGCGCGCGCTCCTCAAGCCCGCCGCGAAGCGCAAGCCGCGCAAGAaggccgcgcggcggtcgcgcgccgccgacgacggcgcgccgactcgacgcggccgcgtcgacgtcgtcgacgtcacGCCGATGCTGATGgcggacgaggcgcgcgagtGGGACTGCGGCGCGTTGACGGACGCGAACGAGGGCCGGCACAGCGCCGATTCGGAGAGCGAATGTTGCGAAGAGTTCGAAACGTCGCAGGACAACGCCTCCGACAGCGACATCTCCGGCAAcgacggcgaggcggcgaTCCTGCCGAGCGAATTGCAGCCCTGGACGCGCGAGGAGGATAAAATTATCTTGGAGACCTTCCAGAAGGAGGAAGTCGTGGAGAACGCGTTTCGATTCATCCTGGAACAGTTGACCGGCCGCACGTTGGAGCAGGTCAAAGAGCGATTCGACGTGTTGAtcaattttctgaaaaagaTGCGCGGCACGCGATAG
Protein Sequence
FIQAFYDKVQDTLAMEDFHKFMNALNEYDEQQTPPTALYNAVAEILDGKHPEILDEFLLFFDSLQAKSLGKLVPYLMLSNMSLFLRKLEVFFHDQPSQVRKIYRAITDLSARSEVTMAEVKSTVLPLLKGNALLNDWFLQIFPMEKPPSRLLDGAWETICMSKDADDDCENAILPEGDDAYGGSSCACACHASEDDGFRARSQHCTPCGIKYLQGRVFFQSGKGLRPARITFDDRSVDHQTRLSPVAPKKRADASPLKVISPGKDSQDEARPSSDDEPDKKRALLKPAAKRKPRKKAARRSRAADDGAPTRRGRVDVVDVTPMLMADEAREWDCGALTDANEGRHSADSESECCEEFETSQDNASDSDISGNDGEAAILPSELQPWTREEDKIILETFQKEEVVENAFRFILEQLTGRTLEQVKERFDVLINFLKKMRGTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00631438;
90% Identity
-
80% Identity
-