Esim020906.1
Basic Information
- Insect
- Ecitophya simulans
- Gene Symbol
- bab2
- Assembly
- GCA_027574965.2
- Location
- JAODGE020031274.1:4455-6837[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-16 2e-12 46.9 0.0 3 45 358 401 356 401 0.95 2 2 8 2.3e+04 -4.5 1.0 6 18 422 433 422 433 0.78
Sequence Information
- Coding Sequence
- ATGACCATGCAGCAGTATTGCCTCCGATGGAACAACCACCAGCCGAACTTCATCGCGGTGTTCTCGAATCTGCTCAACAGCGAGAGCCTCGTGGACGTTACGCTTTCCGCCGACGGCAGACATCTGCAAGCTCACAAACTCGTCCTCTCAGCATGCAGCTCATACTTTCAGtcTTTGTTCACTATGAATCCATGCCAGCATCCCATAGTGATTCTCAAAGATGTAAAGTTCACTGATTTGAAGGTGATTATTGACTTCATGTATTATGGGGAAGTCAATGTATCACAAGATGAGTTGCCACACATTTTGAAAACTGCTGaagctttaaaaattaaagGGTTGGCTGAAATACCCGTGGAAGCATCTCtcaaacatcaaaacaacACAACTGAAAGAACTGAGCTCTTGACATCCACCGAATCTAATTGGACCCCCGAAAACCAACGGCAATCcttgtcgccgtcgccatgCCCGTTGTCACCTGCCAGCAAAAGGAAGAGATTACGGAAAATGTCAACCGGGTCCGGCTCAACAGAGAAACACACAAGCGAAGAACATTCGTCGAGCGAAGTCACGTTATCCTCGCCGATTGGTATGGCTGTAATCAAACCGGACCCAGGTTACTCCAGTAGCAATCCCAACACTCCTGTGAAGTGCAGTCCTAAAGACGGTCACGCCGGATCTCAAGAGAGCGTAGACACCGGATCGCCACAAATCAATTTGCACGTTCCGCAAGATATTCCCGTGCAGCATTCGTTGGAGACCACGATTGACATGTCGGGCACGTCAGCGACCACACAGACGGTTGCCGGTTACCAATGGGGCATAGTCGATCAACACTATCCACACTTTACCCAAGCCACCCTCACCCTCCCGCAAGAATTGCATTACCCGAGCGCGCAGCTGCCGCCCGTCTCTCTCCCGCAGACGTacgtcggcggcagcgtcgcctgcacgtcggcgggcgcggtgGTGCAGCAGCACGTCGCGGCCGCCATGTCGCCgtccgcgacgccgtcgcccgccgccgccccgctgcGGCGCAAGCGCAGCGTCAATCCGCAGGCGCAGGacaatttcgtgcgcgcgctcgacgcggtgCGCTTCGGCGGCATCGGCTTCTGCAAGGCGGCGCGAATGCACGGCGTGAACAATCGCACGCTGTGGATCGAGTACAAAAAGCGCGGCTATCCGGTGAATCGGCTGAGCATTAAGCATCGCAAGGCCGagagcgacgcggcggcggccgctgcggctgccgccgcggccgcagcTGCCGCCATCAAGTCGGAGATGTCCGATCCCTCGCAAACGCAAACCCAATCGCAAAGCTCCGAAAGCGCCGAGGAGAACGCCCACGCGCAACacatgcagcagcagcagcaggaacagcagcaacagcagcagcagcaacagcaacaacagcaacagcagcaggacCAGCAGACGATACAGCACTCTCTGGGGGGGAACTCGGTTGCGATGATTAGCGGGGCGTTCATCGATGGGCGGCCCATCGAGATCGCCACGCCCGTATTGCAGCGCTCGCGCTACTTCGACGGGGGCCTCCTGCACACTACGCCCATTAATTTGCAGAGCATCAATTTCGATCAAATGTGA
- Protein Sequence
- MTMQQYCLRWNNHQPNFIAVFSNLLNSESLVDVTLSADGRHLQAHKLVLSACSSYFQSLFTMNPCQHPIVILKDVKFTDLKVIIDFMYYGEVNVSQDELPHILKTAEALKIKGLAEIPVEASLKHQNNTTERTELLTSTESNWTPENQRQSLSPSPCPLSPASKRKRLRKMSTGSGSTEKHTSEEHSSSEVTLSSPIGMAVIKPDPGYSSSNPNTPVKCSPKDGHAGSQESVDTGSPQINLHVPQDIPVQHSLETTIDMSGTSATTQTVAGYQWGIVDQHYPHFTQATLTLPQELHYPSAQLPPVSLPQTYVGGSVACTSAGAVVQQHVAAAMSPSATPSPAAAPLRRKRSVNPQAQDNFVRALDAVRFGGIGFCKAARMHGVNNRTLWIEYKKRGYPVNRLSIKHRKAESDAAAAAAAAAAAAAAAIKSEMSDPSQTQTQSQSSESAEENAHAQHMQQQQQEQQQQQQQQQQQQQQQQDQQTIQHSLGGNSVAMISGAFIDGRPIEIATPVLQRSRYFDGGLLHTTPINLQSINFDQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629884;
- 90% Identity
- iTF_00632203;
- 80% Identity
- iTF_00632203;