Esim008560.2
Basic Information
- Insect
- Ecitophya simulans
- Gene Symbol
- bab1
- Assembly
- GCA_027574965.2
- Location
- JAODGE020013048.1:1-1644[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-18 6.7e-15 54.9 0.0 1 43 42 85 42 87 0.95 2 2 0.51 1.5e+03 -0.6 1.3 6 15 172 181 170 195 0.82
Sequence Information
- Coding Sequence
- ATGCTAACAACTgcAGACAGCTACCAGTACCAGCTACAGTCCATGTGGCAGAAGTGCTGGAACACGAACCAGAGCCTCGTTCACAATCTACGCTTCCGAGAACGTGGTCCTTTGAAAAGCTGGCGGCCGGAAACGATGGCCGAAGCGATTTTCTCGGTGTTGAAGGAAGGTTTGTCGCTGTCGCAAGCCGCTCGCAAATATGACATCCCGTATCCCACCTTCGTGCTCTACGCAAACCGAGTGCACAACATGTTAGGTCCGTCTGCCGATGGAGGTTCGGATTTACGACCCAAAGGACGGGGGCGGCCTCAGAGAATTCTCTTGGGCGTCTGGCCAGACGAGCACATACGAGGTGTAATCAGGGCAGTTGTCTTCAGAGATTCTCACCAAATCAAGGAAGAACCGCACATTGCTTATCCACGCATTCACGAAAACGTCAATACCGTACAAAACTATCCCAGTAACAACTGCAGTAATGGCTCCGACCCGAACGTATCGCCAGGAGCAGCGGCCGCCGCAGCCGTGGCGGCCGTGGCACATGGTCTTCGGCAACAAATGTGCAGCATGGTGGCAGCAGCGCAGCACGCCAACACGGCACACGACACGAATCCGGTGGCTAGCCTGGTGAACTCCC
- Protein Sequence
- MLTTADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEPHIAYPRIHENVNTVQNYPSNNCSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHANTAHDTNPVASLVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -