Eara006188.1
Basic Information
- Insect
- Ecitomorpha arachnoides
- Gene Symbol
- nfxl1
- Assembly
- GCA_027574945.2
- Location
- JAODGD020011018.1:2-1712[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3.1e-08 0.00013 22.4 10.0 1 18 7 24 7 25 0.97 2 14 0.87 3.7e+03 -1.4 1.3 1 4 34 37 34 47 0.68 3 14 6 2.5e+04 -4.2 1.6 6 10 49 53 49 53 0.93 4 14 8.8e-05 0.37 11.3 17.1 1 18 59 76 59 77 0.94 5 14 1.9e-06 0.0079 16.7 13.4 3 18 88 103 80 104 0.85 6 14 0.00011 0.46 11.0 5.3 9 19 152 162 150 162 0.91 7 14 2.6 1.1e+04 -2.9 14.5 1 12 172 182 172 182 0.96 8 14 3.3 1.4e+04 -3.3 8.5 14 19 210 215 210 215 0.94 9 14 1.3 5.7e+03 -2.0 2.0 5 11 228 234 224 235 0.75 10 14 0.0075 32 5.2 5.8 1 11 251 261 245 265 0.91 11 14 6 2.5e+04 -4.4 4.3 6 10 279 283 276 283 0.86 12 14 0.0086 37 5.0 14.9 3 19 292 309 291 309 0.85 13 14 1.1e-05 0.048 14.2 12.0 1 18 352 371 352 380 0.87 14 14 2.9 1.2e+04 -3.1 0.5 6 10 402 406 401 406 0.85
Sequence Information
- Coding Sequence
- TGCGGGAAAACTTTGGATTGTGGCATGCACGCGTGCAATTTACGTTGTCACAAAGGAAAATGTCAAACGTGTTTGGAAACTGTTGCTAAGCCATGTCGTTGCGGGCAGCACATCAAGGAAGTCCAATGTGGTAAAACGTGTTTGTGCGAGAGTAAATGCAAACAGTTAAAGGACTGTAACAAGCATCCTTGCAACAGAAAATGTTGTGATGGCAACTGTCCGCCATGCGAAAAACCTTGCGGTAAAACTTTAAGTTGCAAGAAACATAGTTGCGCTTCGATTTGTCACCAAGGACCGTGCTATCCATGCAATTTGAGCGAGAAAGTGTCTTGTTTTTGTGGAGGCACGGTTATTACGGTACCCTGTGGCCGGAAAGCAAGAACGAAACCCCCAAAATGTGGAATTAATTGCAAGACGCCACCCGATTGTCACCATAAGATAAGGGACATCCACAAATGCCACTTTGGCGATTGTCCGCCCTGCAAACAAATCTGTGACAAGAAACACGTCAAATGCGGACACCACTGTCACGCAAAATGCCACTCCTCGGTTCTCGTGAAAATCGAACAACCCAAAGCAGCTGCGCCATGGGAAGAACGCGGCCCGCAACTGGAAAAACGTCGCTTGCCTTGCCCACCTTGCCCGGTGCCTGTCCCGATAACATGTTTCGGTAAACACGAAACGTGCGACTATCCCTGTTGCGATGCCCGGCCAGTCAGTTGTCACAAACCGTGCGGCCGGACGTTGAACTGCACCAATCACACCTGCTCATTGGAGTGTCACATAGTGGAAGGTGCAAAAGACGAGACGTCAGCTGGGGATAACTGCGAGGAATGCGAACGCCCATGCGAGAAGGCGCGCGTGGAAGGATGCACGCACAAATGCCCCAAGAGCGGTTGTCACGCGGGCGTTTGCCCGCCGTGTAGGAGCATGCTAAAAATCTATTGTTTCTGTGGGCAAGCGCAACCCTACGTCGTTTGTAACGTGTGGACCACTACCGGGGACAAGGAAGCTTTGCAAAGTTGTGGGAATCAATGTCCACTTAACTTTGCATGTGGACATCGCTGCCGCTCAAATTGCCACTCTGGCGAATGTCCCAACGCCGAACAGTGTCGGAAAAGGGTGAAAATTCCGTGTCCCTGCAAACGCACCAAAAAAGAGTTCGCTTGCGACGTTGTGCGTTATGGCGGAGCGGAAGTCCAATGCGATGACGTGTGCAAACAGAAGCAACTGGACGAGGAGGAACAGAAACGCCTTAAAATCCAAGAGAGACAAAAGCTTCGCGAAGAAGAAAACCAGCGCGAACTTGAGAAGTTTGAAAAGATGTTCGCCAAGAAGAAGAATCGTGATAGAAAAGTCACCAAAGAAGTTGTGCAGACTGATAGCACGAAGAAATACGTTGTCATTTGTGTGTGCACACTTTTTACGTCCATTTTACTCTACTTTGTATTTCAACGTGTTTGA
- Protein Sequence
- CGKTLDCGMHACNLRCHKGKCQTCLETVAKPCRCGQHIKEVQCGKTCLCESKCKQLKDCNKHPCNRKCCDGNCPPCEKPCGKTLSCKKHSCASICHQGPCYPCNLSEKVSCFCGGTVITVPCGRKARTKPPKCGINCKTPPDCHHKIRDIHKCHFGDCPPCKQICDKKHVKCGHHCHAKCHSSVLVKIEQPKAAAPWEERGPQLEKRRLPCPPCPVPVPITCFGKHETCDYPCCDARPVSCHKPCGRTLNCTNHTCSLECHIVEGAKDETSAGDNCEECERPCEKARVEGCTHKCPKSGCHAGVCPPCRSMLKIYCFCGQAQPYVVCNVWTTTGDKEALQSCGNQCPLNFACGHRCRSNCHSGECPNAEQCRKRVKIPCPCKRTKKEFACDVVRYGGAEVQCDDVCKQKQLDEEEQKRLKIQERQKLREEENQRELEKFEKMFAKKKNRDRKVTKEVVQTDSTKKYVVICVCTLFTSILLYFVFQRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -