Basic Information

Insect: Ecitomorpha arachnoides
Gene Symbol: BCL11A
Assembly: GCA_027574945.2
Location: JAODGD020002637.1:1-3886[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.5 3.8e+02 2.4 1.8 1 23 4 27 4 27 0.93

2 6 4.7e-08 7.3e-06 26.6 2.9 1 23 337 359 337 359 0.96

3 6 3.6e-05 0.0056 17.5 6.8 1 23 365 387 365 387 0.99

4 6 3.5e-07 5.4e-05 23.9 3.2 2 23 575 596 574 596 0.97

5 6 4.6e-06 0.00071 20.4 3.3 1 23 602 624 602 624 0.99

6 6 3e-05 0.0046 17.8 0.4 1 22 632 653 632 653 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.5	3.8e+02	2.4	1.8	1	23	4	27	4	27	0.93
2	6	4.7e-08	7.3e-06	26.6	2.9	1	23	337	359	337	359	0.96
3	6	3.6e-05	0.0056	17.5	6.8	1	23	365	387	365	387	0.99
4	6	3.5e-07	5.4e-05	23.9	3.2	2	23	575	596	574	596	0.97
5	6	4.6e-06	0.00071	20.4	3.3	1	23	602	624	602	624	0.99
6	6	3e-05	0.0046	17.8	0.4	1	22	632	653	632	653	0.97

Sequence Information

Coding Sequence: CCAAGCAATTACGTGTGTTCCACGTGCAAGGCGCGCTTGCACTCCGCATGGCGACTGGTGCAACACGTGCAGCACTCCCACGGGGTGAAAATCTACGTCGAGAGCTCCCCCACGAGCAGCAGCAAGTCGTCGAGCAGCAGTAACAACAACAACAACCACAGCTCCTCATCAACTAGTAGTACTTCCTCGGGCTGCTCGTCCGGCGGCGGCGTTCCACCCGCCCCCAACAGTATGCGCCATCTTCTTCCGCCTCCAGACTTACATAATCCTTTCGGCGTTGGTAATTTGTTGCGCTTGCCGATGCCCCCGCTCAATCACGGCCCCGTGCCGCCCGCGCCTCTTTTTTCCCGCCCCGAACACCACTTTCGCATGGAGCAACTCGTCAACGAGCAGTTTCGTCACCATGGAATCAACCTCGCCGCCGCCGCAGCCGCCGTAGCTGCCAGCGGTGGAGTGGTCCCACCACCACCGCATCCGAATTTTCCCTCGCCCGCGGACCGTCAGCCAGCCGTGACGACCTCGCGGGAGCGCAGCACACCCAACGCCGCGCCCGGAGTGGCGGCAGCGGCCGCGACAATGGCGGCGTCGTTGGAACCCCAGCTGGATTTTTACTCGCAGCGGTTGAGGCAACTCGCTGGTACAACCAGCCCCGGAGCGGCGGCACAGACGGGCTCGCCGTCGCCCCGGAAGCACTCGCCGCAAGCGTTCGCCAGTCCCTCGCCCTCTCTGCCCGTCAACCACACCGCCAACACCACCACCGGCACCAGCGGCACCAGCGGCAGCGGCCAGAATAATCACAGCACCAGCTCGTCCGCGTCGGCCGCCAGCAGCGGCAACAACAATAACAACAATAGCGCAAGCACTGGTCCCGATTCGCGCCCATCCAGTGTCTCGCCGCAGCAGAACCTCACGAAGCTAGAAGAGCCGCTGACTACAACGCCACGCAGCACAGCCACGCCTGATGGTAAACCTATGTCGCCCAGCAGAAACAACATGGGGGATGCCATCCACGCCTGTGACTACTGCGGAAAGAAATTCAGATACCAAAGCAATCTGGAAGTCCATCGACGAACCCACACCGGGGAACTGCCCTTCAAGTGCACGGTGTGCGACCACGCATGCGCGCACAGCTCAAAACTGAAGCGTCACATGAAGATCCACCGTACACCTGAAGATCGCACCAGTAACGCTGGATCCGTCGAAACCATTGACGGAGAAGACTCCGAAGATGAAGATATGGAAGAAGAAGAAGAGGAAGACGAGGAGATGGAACCCGAGGAGGAAGCGGAAGACCTGTCAGTCCCCTCTCAATTGGATCCGAAGAGTCAATCGGCGTCTTTGGTAGGTGAGCTTATGGATAAATTTGGCCTAAGCAACATTGCGCAATACAGCGAAGCGTACAAACAAGCTCTACAGGAATCAGGGTCTGCACTCAAGCTACAAATGAACATGAAGGACCGCGATCGCGACAACAACAACACCTTAGCTACGCAATTTAAACTGCGCGATGAATTCAAGGGATTTCTTCCTGGTAGCCAACTCCCACCTTCTGGCCACCAGCCAATGCCACTCTTCTCGCCATTCAACGAGCTTGAGGTCCACAAGCGACTTAAACTCGACCTAGAACGCAACGACTGGTGGATGGGCAACAAAGGTCTGCCCGGTCCCAGTCTGGCGGGTCTGCAAGGTCCCCTGATGAAGAAGGAGTCGCGACGCAACGACACGTGCGAGTTCTGCGGCAAGGTCTTCAAGAACTGCTCCAACCTCACCGTGCACAGGCGCTCACACACCGGCGAAAAGCCCTACAAGTGCGAACTGTGCTCGTACGCGTGCGCGCAAAGCTCGAAGCTCACGCGCCACATGAAAACGCACGGCCGCATCGGCAAGGACGTCTACCGTTGCCGCTTCTGCGAGATGCCCTTCTCGGTGCCGTCGACGCTCGAGAAGCACATGCGCAAGTGCGTAGTCAACCAGGGCAAGGGCCACCTGCTCGCCTCGCTGCCGATGCTCTCCGGCGACGAGGACTCGTCATCGGCGAGCATCCCATCCAAAGAGGCCACATGA
Protein Sequence: PSNYVCSTCKARLHSAWRLVQHVQHSHGVKIYVESSPTSSSKSSSSSNNNNNHSSSSTSSTSSGCSSGGGVPPAPNSMRHLLPPPDLHNPFGVGNLLRLPMPPLNHGPVPPAPLFSRPEHHFRMEQLVNEQFRHHGINLAAAAAAVAASGGVVPPPPHPNFPSPADRQPAVTTSRERSTPNAAPGVAAAAATMAASLEPQLDFYSQRLRQLAGTTSPGAAAQTGSPSPRKHSPQAFASPSPSLPVNHTANTTTGTSGTSGSGQNNHSTSSSASAASSGNNNNNNSASTGPDSRPSSVSPQQNLTKLEEPLTTTPRSTATPDGKPMSPSRNNMGDAIHACDYCGKKFRYQSNLEVHRRTHTGELPFKCTVCDHACAHSSKLKRHMKIHRTPEDRTSNAGSVETIDGEDSEDEDMEEEEEEDEEMEPEEEAEDLSVPSQLDPKSQSASLVGELMDKFGLSNIAQYSEAYKQALQESGSALKLQMNMKDRDRDNNNTLATQFKLRDEFKGFLPGSQLPPSGHQPMPLFSPFNELEVHKRLKLDLERNDWWMGNKGLPGPSLAGLQGPLMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRIGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKGHLLASLPMLSGDEDSSSASIPSKEAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00630000;
90% Identity: iTF_00630000;
80% Identity: -