Basic Information

Insect: Ecitomorpha arachnoides
Gene Symbol: -
Assembly: GCA_027574945.2
Location: JAODGD020022563.1:981-3742[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.4 5.2e+02 1.9 0.2 2 11 203 212 202 221 0.84

2 10 0.0074 1.1 10.3 0.2 1 23 233 255 233 255 0.97

3 10 0.00032 0.049 14.6 1.5 2 23 337 359 336 359 0.95

4 10 3.9 6e+02 1.7 0.1 1 20 416 435 416 437 0.89

5 10 0.0088 1.4 10.1 1.7 2 23 474 495 473 495 0.97

6 10 1.1e-06 0.00017 22.4 0.2 1 23 501 523 501 523 0.98

7 10 0.00025 0.039 14.9 3.5 1 19 529 547 529 552 0.91

8 10 2.5e-08 3.8e-06 27.5 0.6 1 23 558 580 558 580 0.99

9 10 2.6e-07 4.1e-05 24.3 1.8 1 23 586 608 586 608 0.99

10 10 7.2e-07 0.00011 22.9 2.7 1 23 614 636 614 636 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.4	5.2e+02	1.9	0.2	2	11	203	212	202	221	0.84
2	10	0.0074	1.1	10.3	0.2	1	23	233	255	233	255	0.97
3	10	0.00032	0.049	14.6	1.5	2	23	337	359	336	359	0.95
4	10	3.9	6e+02	1.7	0.1	1	20	416	435	416	437	0.89
5	10	0.0088	1.4	10.1	1.7	2	23	474	495	473	495	0.97
6	10	1.1e-06	0.00017	22.4	0.2	1	23	501	523	501	523	0.98
7	10	0.00025	0.039	14.9	3.5	1	19	529	547	529	552	0.91
8	10	2.5e-08	3.8e-06	27.5	0.6	1	23	558	580	558	580	0.99
9	10	2.6e-07	4.1e-05	24.3	1.8	1	23	586	608	586	608	0.99
10	10	7.2e-07	0.00011	22.9	2.7	1	23	614	636	614	636	0.96

Sequence Information

Coding Sequence: ATGGAGGCGACCGAGGAAGAATTACTCGAAAACGTCACCGACGAGTCGGGGAATAGTTACGTTTTACAGCGAATGACGGTCGATAATACGCAATTATTGAGTACGGAATTATTGCAAACGCCTAACGGCTTGGTGGTCGACTTGGGCGGCGATTTTATTCCTGTAAATTACACTTCTGAAGACCTATTGACTCATGATATCACTGATGAGGACAGGAATCTTGCAGCAGCTTTGGTTGCAGTGCAATTTAGTCAACAGCAAAAACAACAGCAGACACAACAGGATGGCAGTGTTATTGTAAATACATCACTGCCATCATTGATTACAACAATTGATGGCACTAAAGTGCAACTTGGTGAACAACAAGTGCTCTTGCAAGACAAACAAACCGGTTTGTTGCAAATCGTCGATGCAGACGAGCTGTACAAGCAGGATTTTGCTAAGTTTGATGAGAGCACTCAACAGCTGCAGTTGATAAAGACAGAGGACCATGTTTTGGACCCTGAGAGCATAGAACCAAGGCCTACTAAAAAGAGCCTCCCTCACAAGAAAAGAATTCCCAGGAAACTGAAAAAGAATGAGAAAACCATTGTAACTAAAGTACAAAAGTGTTCATTCTGTGATCAATTCTTCCCACTGCAGGAGATCAATGATCATCAGGCTGTGTGTCAGAGAAGTGTATCAGCAGTCAATTCATTTGCCTGCCAGATATGCTCAACTGCTTTTGGTGATCAGCTGGCATTCTTTGAGCATCTTAAGCAGCATTATGAGCCTGCAGCTGATAAAGCTGATTGCCAGGAGGTTGGGATTGAAGAGGAACAAGTGGAAAATGTGGAGGGGAATATGGATATTCTTGATGCCAATGATGCTGGCCAAATTATTCCTGATCATATTACAATTCTCAAAAACGATGCAATTTTACACGACGAAACTTCCCATACGATAATCAAAATCGAAGGCGGCAGCGACGAGCAAAAGGAGACGTTCCTCAATTCGATCTTGCAAATGACTTGCCTCCAATGCAACCGGACATTCCGACGGCAGAAGTTCTACGACGCTCACATGCGCGACGTGCACGGGAGCAAGGAGTTGAACGAGTTCAGCGAAACCGAGGACCTGATGGCCGGAATCAACGTCGACGCGGACGGCCAGGTGACCGAAATGGAGACGGACACGAAAGCGTGGTACCGGGACGAGGAGCTGCACGCCACCGAAGAGGATCTGAAGGAGCTGGAGGCGAAGGAGCACGTCTGTCAGAACTGCAGTTCGCAGTTTTTGGACAGGGGGAGCTTGATCGAACATGTGATTAGTTGCGGTAGCTACGAGGAGGAATCAGAAGTGCCTAATAAATTAAGTAAAGTTAAAGAGGAAGTCGTTAAGAAAGCACCAAGAAAGGCCAACAAGAACAAGTCGGAGCTCGAATGCGGCCTGTGCGATCGCAAGTTTCTGCACCGAAATTCGCTGGTGTATCACCTCAGGAGCCACACCGAGGACAGGCCTTATCAGTGCGAGCAGTGCGGCAAGAGTTTCTTCGCCGCGAGCGCTCTGAAGGTGCACCTGCGGCTGCATTCCGGCGAGAAGCCGTATAGGTGCGAGTTTTGCGGCAGGCACTTTAGGCAATGGGGCGATTTGAAGTATCATTGCATTTCTATCCATTCGGACGAAAAGCAGTATCAGTGCGAATACTGCGGCAAGGAATTCGCGCGGAAGTATTCGCTCATTGTGCATCGGCGAATTCACACCGGAGAAAAGAACTATCGGTGCGAGTTTTGCGGGAAGAGCTTCCGGGCGTCGTCATATTTACAGAATCATAGGAGGATTCATACAGGTGAAAAACCGCACGCCTGTGAAATGTGCGGCAAACGCTTTCGCGTGCGCTCCGACATGAAACGCCATCTTCGCACGCACGCGAAAACGCGACGACCCGGGAGGCCCGAGATCGTCGAGGGACTGAAGGTCGAAACGATGGAGCCCGAAATACCGCCAGAGTCCGAAGATACCAACGAATCGATCACGCTTCTAAAGGAGGAGAACGAGACGGCGGTGCAGGCCCTGCAGTACGAACAGGATGGCGGGTTAGAGTCGATACGCGACGCGAACACCTTGTACGTTCACATGCCCATTTTGATATCGTGA
Protein Sequence: MEATEEELLENVTDESGNSYVLQRMTVDNTQLLSTELLQTPNGLVVDLGGDFIPVNYTSEDLLTHDITDEDRNLAAALVAVQFSQQQKQQQTQQDGSVIVNTSLPSLITTIDGTKVQLGEQQVLLQDKQTGLLQIVDADELYKQDFAKFDESTQQLQLIKTEDHVLDPESIEPRPTKKSLPHKKRIPRKLKKNEKTIVTKVQKCSFCDQFFPLQEINDHQAVCQRSVSAVNSFACQICSTAFGDQLAFFEHLKQHYEPAADKADCQEVGIEEEQVENVEGNMDILDANDAGQIIPDHITILKNDAILHDETSHTIIKIEGGSDEQKETFLNSILQMTCLQCNRTFRRQKFYDAHMRDVHGSKELNEFSETEDLMAGINVDADGQVTEMETDTKAWYRDEELHATEEDLKELEAKEHVCQNCSSQFLDRGSLIEHVISCGSYEEESEVPNKLSKVKEEVVKKAPRKANKNKSELECGLCDRKFLHRNSLVYHLRSHTEDRPYQCEQCGKSFFAASALKVHLRLHSGEKPYRCEFCGRHFRQWGDLKYHCISIHSDEKQYQCEYCGKEFARKYSLIVHRRIHTGEKNYRCEFCGKSFRASSYLQNHRRIHTGEKPHACEMCGKRFRVRSDMKRHLRTHAKTRRPGRPEIVEGLKVETMEPEIPPESEDTNESITLLKEENETAVQALQYEQDGGLESIRDANTLYVHMPILIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00632282;
90% Identity: iTF_00632282;
80% Identity: -