Basic Information

Insect: Ecitomorpha arachnoides
Gene Symbol: -
Assembly: GCA_027574945.2
Location: JAODGD020039794.1:4338-7755[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.6e-05 0.0025 18.7 0.7 1 23 133 155 133 155 0.95

2 15 0.00023 0.036 15.0 0.3 3 23 163 183 162 183 0.99

3 15 4.9e-05 0.0075 17.2 0.0 1 23 270 292 270 292 0.98

4 15 0.041 6.3 8.0 0.3 1 23 298 321 298 321 0.96

5 15 2.7e-07 4.2e-05 24.3 1.5 1 23 347 369 347 369 0.97

6 15 0.0021 0.33 12.0 0.0 1 23 382 404 382 404 0.95

7 15 0.1 16 6.7 0.0 1 23 410 433 410 433 0.94

8 15 0.03 4.7 8.4 3.4 2 23 441 462 441 462 0.93

9 15 1.5e-06 0.00023 21.9 2.4 1 23 468 490 468 490 0.98

10 15 0.0017 0.27 12.3 0.3 2 23 496 517 495 517 0.97

11 15 5.2e-06 0.0008 20.2 0.4 1 23 525 547 525 547 0.98

12 15 0.0022 0.35 11.9 0.2 3 23 555 575 553 575 0.97

13 15 7.1e-05 0.011 16.6 0.3 1 23 581 603 581 604 0.95

14 15 0.17 26 6.0 0.4 1 23 618 640 618 640 0.95

15 15 0.00051 0.078 14.0 0.0 1 20 969 988 969 991 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.6e-05	0.0025	18.7	0.7	1	23	133	155	133	155	0.95
2	15	0.00023	0.036	15.0	0.3	3	23	163	183	162	183	0.99
3	15	4.9e-05	0.0075	17.2	0.0	1	23	270	292	270	292	0.98
4	15	0.041	6.3	8.0	0.3	1	23	298	321	298	321	0.96
5	15	2.7e-07	4.2e-05	24.3	1.5	1	23	347	369	347	369	0.97
6	15	0.0021	0.33	12.0	0.0	1	23	382	404	382	404	0.95
7	15	0.1	16	6.7	0.0	1	23	410	433	410	433	0.94
8	15	0.03	4.7	8.4	3.4	2	23	441	462	441	462	0.93
9	15	1.5e-06	0.00023	21.9	2.4	1	23	468	490	468	490	0.98
10	15	0.0017	0.27	12.3	0.3	2	23	496	517	495	517	0.97
11	15	5.2e-06	0.0008	20.2	0.4	1	23	525	547	525	547	0.98
12	15	0.0022	0.35	11.9	0.2	3	23	555	575	553	575	0.97
13	15	7.1e-05	0.011	16.6	0.3	1	23	581	603	581	604	0.95
14	15	0.17	26	6.0	0.4	1	23	618	640	618	640	0.95
15	15	0.00051	0.078	14.0	0.0	1	20	969	988	969	991	0.94

Sequence Information

Coding Sequence: ATGGAGGAGTCGTACACGCTGACATGGGAAGAGGCTGGCGAGATCGTCGAGACCACCGAGGAGGTGATCTGTGGCATTCCCACTGAGAACATGATTGCTGAGACAGTGGACTATGAAGATGTCTGTGAGGAAGTCGTCGCCGAGGAGGTCATTCCCGAGGACGAAGTCGTGTACCTCACCGACGACGTGATTGTGATGGAGGAGCCCCAGGAATTTGTAGCTGCCCCTGACTACATGGATTGTGTCACTGAGGAGGTGGTCGCTGAGAACTGGGAAACATGCAATGAGCTGGTGGTGGGCTCTGAGGAGAACATTGGCATCGAAGAGGAACAGGGTGAAGAGGATGTCATGATACCTCTGCCCACTGATCAGGATCAGTATTCTGCGATGAGGCCTTATCCCTGTGATTTTTGCAGCCGTAGGTTTAGAAAGAAGGCCAACCTCATGAACCACATGGTGGCGCATCAGACGGACAAGCCGCACGGATGCAATCTATGCGGCGTGCGATACGTGCGCAAGTTCGATTTGATGAATCACTTGAAGATCCACGCTTACGTGCCAGACCATGCCGAGGACGAGGAGATCGAGGATAATTACGATACGATGCGCAAACGCCAGAAGGCTGGCTTCGTGACAAAGACTAAGAGCAAGAAGTTTGCTCGGAAAATTAAGGACGAACAAGGGCCCAGCTCGCGCGTATATAATTACGCCGAGGATGGGCGGCTGATCGAGGATGGAACGGACGGCAGTTCGGAGCATTTATTGTCTGGGGAGACACGATATCCCATAACAGATTCACGCAAACCCTTCGTCTGCCAATACTGCGGGGTGGGTTTCGCCCGAGAGAAAGCCCTCGCTTCGCACGCGCGCATGCATCAAGGCGACAGTCCCTTCGAATGTCGCCGTTGCGGCGAAATGTTCTGGGACGCCAACCTGATGCGCGAGCACATTAAGAACAAGCACGACGGCATCGAAGACGATTTCCTCGACGAGGAGGACGACGAGTTCTCCGAGGAGGAGAACGCCAAGTACGGCGAATTCTTCTGCCAAACGTGCGGCATGACCTTCCCCCGCCAGGAACAGCTGAAACGACATCAGCGCGTGCACATCAAGAGCGAGTACACGAACGACAACGAATATCTGCACATATGCAACGTGTGCGGCGAGTCGTTCGCGGAGGCGTTGGATCTGCTCGCGCACGCCGAAGTGCACGCCCGCGTGCCGGAGTACAGGTGCAATCTGTGCGGCGACACCGCGTCGGACGAGCAGGCGCTCGCCGCGCACGTGCAGGCCAAGCACGGCGACAATCTGCCGGAGAACACCTGCTTGCATTGCGGGCGGATCTGTAAAGATCGCCGCGCGCTGATGACGCACAGCCTGGAGCACTCCAAAGAGAAGACATTCCCGTGCCCGAAGTGTCCGAAGACATTTCACAACAAGGCGCGCTTGAAGCGGCACATGCTGTCGCATCGCAACAAGGCCGTGCAGTGCGACGTGTGCGGCGAGGATTTCCCCGACGGCCGATCGCTGATGAACCATCGGCACAGTCACAGCAGCGTGTCGGGACGTCAGTTTCCGTGTCGCGAGTGCGGCAAGACGTTCGGGTCGCGCAGCTCGCAGCAGATTCACATTCGGATTCACACCGGCGAGCGGCCGTACGGCTGTCGGTTTTGCTGGAAGGCGTTTGCCGACGGCGGCACGCTGCGCAAACACGAACGTATTCACACCGGGGAGAAGCCCTACGCTTGCGCGGTGTGCCCCAGGGCGTTCAACCAGCGCGTCGTGTTGCGCGAGCACATTCGCTCCCATCACTCCGGACCGGATCCTAATTTCACGCACACGATGACGCCGTACAATTGCGCGGTGTGCTCGGATCTGTTCTCCACCTCGCAGGATCTGATCCTGCACTTGATTCACCACTGCGACATGAACACGGCGATGCGCAGGCAGCCGCAGATTGGACCCAGGAAGTACAAGCGACGGCGCAAGTTGAAGCCGCACGAGATCGAGCTAATGTCGACGATGGACGCCAGCAACTACGAGGTACAGGAGAACATCACCGACAACATCAAGAACGAGTTCTTCGACTCCGAGGACGACGGCACCAAGCAGTCGCCGAAGAAGAAACGGAAGAACTCGACGTCGGCGTCCAAGAGTCCCGAGACGTCTTTCGCGGATGTTTACAACAGCTTCTCGTCGGCCATCGAGAACATCAATACGATCGTCAACACGAAGTCTGGCAAGCCGAAGAAGAAGCTCGGGAAGGAGGCGCAGACGACCAGCACGGGCCGGCCGAAGATGATACACACGCAGAAGACGAAGGTCACGCTCGACGGGGCGGACGCCGGCAAGCTGAAGCACAAGACCAAGACGCTCATCACGCGGACGCAGCACACGGCGGAGCTGAAGTCGTCGGGCGGCGATCGCATACGGCCGCGCACGAAGAACGTCAGCTATCACATACTCACGCCGGACAAGCTACCGCTGGCCACCTTCGAGGACCCCACCGAGCAGGCTGTCAACAGTCTGCTGGGATTGAATCAGGGCATGGATCACGAGGAGATCATCAACGGTTCGGAGTGCATCGAAGATCCGCTGCGATCGCCCACTAAGGGTCGTCGCCGCTCGACGAGCAGCAGCGACGGCAACGTTTCGATGGTGTCGTCGGGCAACAGCCTGGCGCCGGGCAGACACATCATCGGCGGCGGACAAGTCGTGAAATTCGTCGGCAGCGGCATGATTGTCAAGAAGAAGGTGAAGATCGAGCGGCCGGACCCGATCGAGGAGGAGGATCCGGACGACCAGGATCCGCTCGCGTCCGAGTTCGTCTCGATCAAGCAGGAGATCATCGAGAACCCGCTGAACGATCTGGCCGAGGCGTCCATGCACCACGGCCAGAGCGCGTACAAATGCGAGATGTGCAGCGAGGTGTTCGCCGATCGGTCGCTGCTCCTGATGCACGTCCCGATTCACATATGA
Protein Sequence: MEESYTLTWEEAGEIVETTEEVICGIPTENMIAETVDYEDVCEEVVAEEVIPEDEVVYLTDDVIVMEEPQEFVAAPDYMDCVTEEVVAENWETCNELVVGSEENIGIEEEQGEEDVMIPLPTDQDQYSAMRPYPCDFCSRRFRKKANLMNHMVAHQTDKPHGCNLCGVRYVRKFDLMNHLKIHAYVPDHAEDEEIEDNYDTMRKRQKAGFVTKTKSKKFARKIKDEQGPSSRVYNYAEDGRLIEDGTDGSSEHLLSGETRYPITDSRKPFVCQYCGVGFAREKALASHARMHQGDSPFECRRCGEMFWDANLMREHIKNKHDGIEDDFLDEEDDEFSEEENAKYGEFFCQTCGMTFPRQEQLKRHQRVHIKSEYTNDNEYLHICNVCGESFAEALDLLAHAEVHARVPEYRCNLCGDTASDEQALAAHVQAKHGDNLPENTCLHCGRICKDRRALMTHSLEHSKEKTFPCPKCPKTFHNKARLKRHMLSHRNKAVQCDVCGEDFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNFTHTMTPYNCAVCSDLFSTSQDLILHLIHHCDMNTAMRRQPQIGPRKYKRRRKLKPHEIELMSTMDASNYEVQENITDNIKNEFFDSEDDGTKQSPKKKRKNSTSASKSPETSFADVYNSFSSAIENINTIVNTKSGKPKKKLGKEAQTTSTGRPKMIHTQKTKVTLDGADAGKLKHKTKTLITRTQHTAELKSSGGDRIRPRTKNVSYHILTPDKLPLATFEDPTEQAVNSLLGLNQGMDHEEIINGSECIEDPLRSPTKGRRRSTSSSDGNVSMVSSGNSLAPGRHIIGGGQVVKFVGSGMIVKKKVKIERPDPIEEEDPDDQDPLASEFVSIKQEIIENPLNDLAEASMHHGQSAYKCEMCSEVFADRSLLLMHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00632255;
90% Identity: iTF_00632255;
80% Identity: -