Eara019627.1
Basic Information
- Insect
- Ecitomorpha arachnoides
- Gene Symbol
- bab2
- Assembly
- GCA_027574945.2
- Location
- JAODGD020035509.1:5541964-5544326[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-16 2.2e-12 47.0 0.0 3 45 355 398 353 398 0.95
Sequence Information
- Coding Sequence
- ATGACCATGCAGCAGTATTGCCTCCGATGGAACAACCACCAGCCGAACTTCATCGCGGTGTTCTCAAATCTGCTCAACAGTGAGAGCCTCGTGGACGTCACGTTGTCCGCCGACGGCAGGCATCTGCAAGCTCACAAACTCGTCCTCTCAGCATGCAGCTCATACTTTCAGTCTTTGTTCACTATGAATCCATGCCAGCATCCCATAGTGATTCTCAAAGATGTAAAGTTCACTGATTTGAAGGTGATTATTGACTTCATGTATTATGGGGAAGTCAATGTATCGCAAGATGAGTTGCCACACATTTTGAAAACCGCTGAggctttaaaaattaaagGTTTGGCTGAAATACCTGTGGAAGCATCtctaaaaaatcaaaaCAACACAACAGAAAGAACTGAGCTCTTGACATCCGCCGAATCTAATTGGACACCGGAAAACCAACGGCAATCCTTGTCGCCGTCTCCATGCCCGTTGTCGCCTGCTAGCAAAAGGAAGAGATTACGAAAAATGTCAACCGGATCCGGCTCAACAGAGAAACACACAAGCGAAGAGCATTCGTCCAGCGAAGTCACGTTATCCTCGCCGATGGGCATGGCTATAATCAAACCGGATCCAGGTTACTCTAGTAGCAATCCTAACACCCCTGTGAAGTGCAGTCCTAAAGACGGTCACTCCGGATCTCAAGAAAGCGTAGACGCTGCATCGCCACAAATCAATGTGCACGTCCCGCAAGATATTCCCATGCAACATTCGGTGGAGACGACGATTGATATGTCGGGCATGTCGGCGACCGCACAGACAGTTTCCGGTTACCAATGGGGCATTGTCGATCAACACTATCCACACTTTACCCAAGCCACCCTCACCCTCCCGCAAGAATTGCAATACACGAGCGCGCAGCTGCCGCCCGTCTCGCTCCCGCAGACGTACGTCGACGGCAGCATCGCCTGCACGTCGGCGGGCGCCGTGGTGCAGCAGCACATCGCGACCGGCACGTCTCCGCCCGTAGCGCCGGTGACCCCCTTGCGGCGCAAGCGCAGCGTCAATCCGCAGGCGCAGGACAATTTCGTGCGCGCGCTGGATGCGGTGCGCTTCGGCGGCATCGGTTTCTGCAAGGCGGCGCGAATGCACGGCGTGAACAATCGCACGTTATGGATCGAGTACAAAAAGCGCGGCTATCCGGTGAATCGGCTGAGCATTAAGCATCGCACCGCGGCGGCGGCGGCGGCTGCCGCTGCCGCTGCGGGCGCTACTGTCGCAACTGTCGCGATCAAGTCGGAGCCGTCCAATGCTTCGCAAACGCAAACCCAAACGCAAACCCAATCGCAAAGCTCCGAAAACGCCGAGGAGAACGCCCACGCGCAAGGTATTCAGCAGCAGCAGCAGCAGGAGCAACAGCAAGGCCAGCAGACGATACAGCACTCTCTCGCAGGGAACTCGCTTGCGATGATTAGTGGGGCGTTCATCGATGGGCGGCCCGTCGAGATCGCCGCGCCCGTGTTGCAGCGCTCGCGCTACTTTGACGGGGGCCTCCTGCACACTACGCCCATTAATTTGCAGAGCATCAATTTCGATCAAATGTGA
- Protein Sequence
- MTMQQYCLRWNNHQPNFIAVFSNLLNSESLVDVTLSADGRHLQAHKLVLSACSSYFQSLFTMNPCQHPIVILKDVKFTDLKVIIDFMYYGEVNVSQDELPHILKTAEALKIKGLAEIPVEASLKNQNNTTERTELLTSAESNWTPENQRQSLSPSPCPLSPASKRKRLRKMSTGSGSTEKHTSEEHSSSEVTLSSPMGMAIIKPDPGYSSSNPNTPVKCSPKDGHSGSQESVDAASPQINVHVPQDIPMQHSVETTIDMSGMSATAQTVSGYQWGIVDQHYPHFTQATLTLPQELQYTSAQLPPVSLPQTYVDGSIACTSAGAVVQQHIATGTSPPVAPVTPLRRKRSVNPQAQDNFVRALDAVRFGGIGFCKAARMHGVNNRTLWIEYKKRGYPVNRLSIKHRTAAAAAAAAAAAGATVATVAIKSEPSNASQTQTQTQTQSQSSENAEENAHAQGIQQQQQQEQQQGQQTIQHSLAGNSLAMISGAFIDGRPVEIAAPVLQRSRYFDGGLLHTTPINLQSINFDQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629884;
- 90% Identity
- iTF_00631577;
- 80% Identity
- iTF_00631577;