Basic Information

Gene Symbol
ct
Assembly
GCA_027574945.2
Location
JAODGD020032146.1:1-7715[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.2e-27 1.8e-23 82.8 0.0 3 72 318 388 316 393 0.95
2 4 2.3e-32 2e-28 98.7 0.0 3 77 698 773 696 775 0.96
3 4 1.5 1.3e+04 -3.2 0.0 41 65 794 818 779 818 0.85
4 4 1.4e-30 1.2e-26 93.0 0.0 3 75 907 980 905 984 0.95

Sequence Information

Coding Sequence
AACACGCAGTTGTTGGAGGAGGTCCAGCGACTGCAGGTGAGCCTCTCGAGTTCCATGTCGCAGATCTCCCGTCTCGAGGAGCAGCTCGAGCAGAAGCGGCTGCAGATCGCGCGGCTCGAAAGCAAGCTGGACGCGCAGCGCGACTACGATGACCTCAAGCGAGAACTGAGCATACTGAGGACGGAAATCGTCGGCAGCGAGAAGTCGCCCGCCAACCTCGTCGAGGCGCTGATCGAACGCTCCAAGCAGGAGCGCTGCAAATCGCCGAGCTCGGACGCCGAAGGTGCGACCAACCCTCCTCTCGGTAACACTCTTGACGCTCACCTAACACCACCACCCCTCCTCGGCCGGATGCGGAACGTCGAGCAGTTCGGCGTGCTGCTCGGCGAGGAGATCGTCGCCACATGGCGGCGCTCGCTGGACGCCTCACTCATTCCCTCCTCGTCCGCAGATGGCTCGCCGCCCGCGCCGCCGCCGTCGACGAAGGCGTCGCTGACGCCGTCGGCGCCGCCGACGCCCACGCCGCGTCCGGCCACCACGCCGGCGTCGCTCTCGTCGGCGACCACCGACGCCAAGTCGACGGCGTCGACGCCGCAGCCGATGGAGGCGCAGCCGTCGCCGGCGGCGCTCAACGGCGCGCCCAAGTCGCCCGAGGACAACAACAACCACCATCTCAGCAACAACAACCTGCCGCCGCTGGCGGCCAGCGCCACCGCCGCCATGCTCAACATGAACTTCCTGCGCGCCGGCGCCGCCGTCGCCGCCGCCGACGACCTCAAGCCGACCTATCGCTTCGACGAGCCGCATCGCACCTACCGCTACGCCGAGGAGCTCGGCCTCGCGCCCGGCAGCATGGTCTCGCGACTCGGCGAGAGCCTCATACCGAAGGGCGATCCCATGGAGGCGAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGAACCTCGACACGCTGCAGATATCGCGACGCGTCCGGGAGCTGCTGTCGATACACAACATCGGGCAGCGCCTCTTCGCCAAGTACATACTCGGCCTCTCGCAGGGCACCGTCTCCGAGCTGCTCTCCAAACCGAAGCCGTGGGACAAGCTCACCGAGAAGGGCCGCGACAGCTATCGCAAGATGCACGCGTGGGCGTGCGACGACCACGCCGTCATGGTGCTCAAGTCTCTCATACCAAAGAAAGATTATTTTTCGTCCTCAGGCAAAGAAAGCGCCGGCGGCATGCCGCCGTTCGGCGCGCGCCCCGACGCCGACCTCACCGACGAGCGGCTCGCGCACATCCTCGGCGAGGCGCAGCACATGCAGATGAAGGGCGGCGGCGTCGGCCAGGAGCCGGACGCGCTCAGCAACGACGACTCCAAGTCGCCGCACGGCCAGTGCCGGTCGCCGTTCAGCCGCGACTCGTCGCAGAATCGCCGCCTGAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTCTACAAGATCTACCAGGAGGAGCTCGCGAAGATCATGGGCAAGGACATGCGCGGCGCCGGCGCGTTCCAGGGTCTGTTTCTTCCGCAACTGTTTAGCGGCAACCCGCTGGATCGCACCCAGGATGAGATCCGCATGACGCTGGAGGCGTACCACAGGGAGATGCTGAAGCTGAACCAGGGCCAGGGCCTGAGCAACCTGGGCATCCTGGCGCTGCAGCAGCAGGCGCAGGCGTTGGCGCAGCAGGGCCCGCTCAACGGCGGCGTGCAGGACCTGTCCATTCCCAAGGAGGCGAAGCTCAAGAGCGCCGAGGAGAAGGAGAAGCTCGACGAGGAGAAGCACAGCAACAGCTCGGCGTTCAGCCTCGTCCGGCCGAAGCCGGAGCCGACGACGCCGCTGCCCAGCTCGACGGCGTCGAGCCCGCTGGGCAACGCCATCCTGCCGCCCGCCACCTCCGAGGAGTTCTGCGCGTCGTCGGTGGCGTCGCCGCTGCAGCGCATGGCCTCCATCACCAACTCGCTCATCTCGCAGCCGGCCGCCCAGCCGCACCACAACGCGTCGCAGCGGCCCCTCAAGGCCGTCCTACCGCCCATCACGCAGCAGCAGTTCGATCTGTACAACAACCTCAACACCGAGGATATCGTCAAGAAGGTCAAGGAGCAGCTGAGCCAGTACTCCATCAGTCAGCGGCTGTTCGGCGAGTCCGTGCTGGGCCTCTCGCAGGGCTCCGTCAGCGACCTGCTCGCGCGCCCGAAGCCCTGGCACATGCTGACGCAGAAGGGGCGCGAGCCCTTCATCCGAATGAAGATGTTCCTGGAGGACGACAACGCCGTGCACAAGCTGGTCGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACCGGCGGCTACGGCGGCGCGTGCGCCACCGTCAGCAAGCCGATGCCGCCGAAGATGCTGTGCGAAGCGGCCGGACTGTTCAACAAGATGCAGCAGGAGCAGCAGAACCTGCTCCCGCCCTCGCTGCAGCTCCAGCATCCGCAGCCGCAACCGCCGCCGCCGCCGATGCTCTTGACGCCGCCGGGCGTCCCGCCGCATCACGCCATCAACCTGCAGAACTCGGCCGCCGCCGCCGCCGAGCACATGAAGAAGAACCATAGCCCGCACGTTCAACATTCCCCGGTCGGTCCAGCACAGAGCGCCATGCGCAGCCTGCATCAGCACATTTCGCCCAGCGTCTACGAGATGGCCGCGCTGACGCAGGATCTGGACACGCAGATCATCACGACCAAGATCAAGGAGGCGCTCCTCGCGAACAACATCGGTCAAAAGATTTTCGGCGAGGCCGTGCTGGGCCTCTCTCAGGGATCCGTCAGCGAGCTGCTGTCCAAGCCCAAGCCCTGGCACATGCTGAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTCAACGACGCCCACAACGTCGACCGCCTCCAGGCGCTGAAGAACGAACGTCGCGAGGCCAACAAGCGTCGTCGTTCGTCGGGGCCCGGCGCGCACGACAACAGCTCGGACACGTCCTCCAACGACACCTCGGAGTTCTATCACTCGAACTCGCCGGGCCCGGGGCCCGGCATGCCGTCGGCGAAGAAGCAGCGCGTGCTGTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCGTTCGTGATGGACCCCTATCCGAACGTCACAACGATCGAGTTCCTCGCCCAGGAGCTGAACCTCTCCAGCCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGCCTCAAGCAGCAGGTGCCGCACGGCCTCGCGAACGACCTGCCGCCGCGCGACCAGGCCGGCGGCCAGCCTCCGTTCGACCCGATGCAATTCCGACTGCTACTCAACCAAAGACTCATAGAATTATCGAAAGAACGCATGGGCCTCGGAGGCGTCGGCCTACCCTATCCGCCGTACCTGGCGACCAATCCGAATCTCGCGGCGCTGATCAGCCGCGGCATCCTGCCCACCGGCGACGAGCTCGCCGCGCTGAACAACGCCGTCAAGGAGCAGATCAGCGGGCTGGACCTCTCGATGGGCGCGCTGAAGCGCGAGCCGGGCGACTTCGACGACGAGGACGAGCTGGAGTCGAACGCCGGCTCCGACGACACGAACATCTCCGGCGGCTCGCTGCGCGGCGAACCTAAGCCCGAGCCGAAGGAGACGCCGGTGCAGGCGCGCTCGTCGCGGCGGAAACCCGCCGCGCCCCAGTGGGTCAATCCCGACTGGCAGGACGAGAAGGAGAAGCCCGCCACCGGCGACGAGGTCATCATCAACGGCGTGTGCGTCATGCAGACGGAGGACTACGGCCGGCGCGGCGCCGAGGAGACGGTGCGCGTCGAACCCACGCCCGTCATGGACCGCTACGAGGACGACCAGAGCGACGACGCCTCCTCGGTGCGCAGCCACCGCGACCAGGCGGAGGTGAAGAGCGAGCGCGACGACGCCGACGCCGAGGAGGCCGAGGACAAGTCCGTCAAGCACGAGAACGACGAGGAGCGGTGGGACTACTGA
Protein Sequence
NTQLLEEVQRLQVSLSSSMSQISRLEEQLEQKRLQIARLESKLDAQRDYDDLKRELSILRTEIVGSEKSPANLVEALIERSKQERCKSPSSDAEGATNPPLGNTLDAHLTPPPLLGRMRNVEQFGVLLGEEIVATWRRSLDASLIPSSSADGSPPAPPPSTKASLTPSAPPTPTPRPATTPASLSSATTDAKSTASTPQPMEAQPSPAALNGAPKSPEDNNNHHLSNNNLPPLAASATAAMLNMNFLRAGAAVAAADDLKPTYRFDEPHRTYRYAEELGLAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLQISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDHAVMVLKSLIPKKDYFSSSGKESAGGMPPFGARPDADLTDERLAHILGEAQHMQMKGGGVGQEPDALSNDDSKSPHGQCRSPFSRDSSQNRRLKKYENDDIPQEKVYKIYQEELAKIMGKDMRGAGAFQGLFLPQLFSGNPLDRTQDEIRMTLEAYHREMLKLNQGQGLSNLGILALQQQAQALAQQGPLNGGVQDLSIPKEAKLKSAEEKEKLDEEKHSNSSAFSLVRPKPEPTTPLPSSTASSPLGNAILPPATSEEFCASSVASPLQRMASITNSLISQPAAQPHHNASQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACATVSKPMPPKMLCEAAGLFNKMQQEQQNLLPPSLQLQHPQPQPPPPPMLLTPPGVPPHHAINLQNSAAAAAEHMKKNHSPHVQHSPVGPAQSAMRSLHQHISPSVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPGMPSAKKQRVLFSEEQKEALRLAFVMDPYPNVTTIEFLAQELNLSSRTITNWFHNHRMRLKQQVPHGLANDLPPRDQAGGQPPFDPMQFRLLLNQRLIELSKERMGLGGVGLPYPPYLATNPNLAALISRGILPTGDELAALNNAVKEQISGLDLSMGALKREPGDFDDEDELESNAGSDDTNISGGSLRGEPKPEPKETPVQARSSRRKPAAPQWVNPDWQDEKEKPATGDEVIINGVCVMQTEDYGRRGAEETVRVEPTPVMDRYEDDQSDDASSVRSHRDQAEVKSERDDADAEEAEDKSVKHENDEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00631387;
80% Identity
iTF_00631387;