Basic Information

Gene Symbol
kn
Assembly
GCA_027574945.2
Location
JAODGD020014852.1:793-4695[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-124 1.6e-120 403.7 0.0 205 387 1 190 1 197 0.99
2 2 8.5e-15 5.4e-11 42.0 11.3 421 562 204 343 194 350 0.73

Sequence Information

Coding Sequence
ATGCGCCGCTTCCAAGTTGTCATAGCGACGCAAGTGGCCGTCGACGGGCCGCTGCTGGCGATCTCGGACAACATGTTCGTCCACAACAACTCCAAGCACGGCCGACGGGCGAAACGTCTCGACCCCGCCGAAGGTCTTTACCCGCCTTTACCAGTTGCAACTCCTTGTATAAAGGCAATCAGCCCTTCTGAGGGTTGGACGTCAGGTGGTTCCACTGTAATCATTGTTGGCGACAATTTCTTCGATGGCTTACAAGTTGTTTTTGGCACCATGTTAGTTTGGAGTGAACTGATTACACCTCACGCAATCCGGGTGCAAACCCCACCACGACACATACCTGGCGTTGTAGAGGTTACGTTGTCGTATAAATCAAAGCAATTTTGCAAGGGTGCTCCTGGACGATTTGTTTATGTTTCGTTAAATGAACCTACCATTGACTACGGATTCCAAAGACTACAAAAACTGATCCCTAGACATCCGGGTGACCCAGACAAATTACCAAAGgaaattatattaaaacGAGCAGCTGATCTTGCTGAAGCACTCTACACGATGCCCCGTAACAACCAGCTAGGTCTGACGGGTCCCAGGTCACCCACAATGGGCCAAAACGGGATGGCTTCCAGCTTCAACACGTATACCGGACAGTTGGCCGTCAGCGTGCAGGAGAGCGGAAACGGTCAGTGGACTGAAGAAGAGTACGGCCGAGCGCAGAGCAGCAGCGTTTCACCTCGCGGCGGCGGCTACTGTTCGAGCGCATCCACTCCGCACTCGTCCAACGGCGGAGGCTCTTACGGAGGCGCCGGCGGCGGCATGAACGGATACGGCGGCGCGACGCCCACCAGCAACGGCATGTTACCCGGCTCACCTTCGGCCACCGGCGGCGGCATCTTCAATTCTGCGCCGATATCCGCTGAAGCCGTacataattattttggCACACATCACCATCATCAGCACGCGGCTGCGATCAAAGCGGAGAAAGAGAAGAGCGCGTTTGCGCCGGTAGTGCGCGGATCGCCGCCTCCCGGGGTGCATCCGCATCCTCCGGCACCCGCTCTATTTCATCACCAGCCCGTCACCGGCTGGCATCACTTGGCCGTGCAGTGTTAG
Protein Sequence
MRRFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYTMPRNNQLGLTGPRSPTMGQNGMASSFNTYTGQLAVSVQESGNGQWTEEEYGRAQSSSVSPRGGGYCSSASTPHSSNGGGSYGGAGGGMNGYGGATPTSNGMLPGSPSATGGGIFNSAPISAEAVHNYFGTHHHHQHAAAIKAEKEKSAFAPVVRGSPPPGVHPHPPAPALFHHQPVTGWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00429627;
80% Identity
-