Basic Information

Gene Symbol
Arid4b
Assembly
GCA_027574945.2
Location
JAODGD020038527.1:12455-18420[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-28 2e-24 86.3 0.5 1 89 293 378 293 378 0.95

Sequence Information

Coding Sequence
ATGCAAGCAGACGACCCTCCTTATTTGCATGTCGGTACCGCAGTCAGTGCAAAGTACAAGGGGGCCTTTTGTGAAGCTAAGGTTAGCAAAGTTGTTCGCACAGTAAAATGCAAGGTTACATTCAAAATGGGGCTGGGCACAGCCACTGTCAGTGATGAGGCAATAAGGGGGCCAATCCGGGTTGGACAAACTGTGTCTGCAAGGCATCCAGAGAGAAAAGAGTACATTGATTGCCTTATCACTAAAATCCAAGACTGCAGCCAATATACAGTTGTTTTTGATGATGGAGACATTACAACACTGAGGAGGTCAGCATTGTGTTTGAAGAGTGGCAGGCACTTCAATGAAAGTGAAACTCTAGACCAACTTCCACTTACACACCCTGAACACTTTGGCAATCCAGTCATGGGAGGCAGAAGGGGTAGAAGAAGCAGGCAGTTAAAGGAGGACAGTAGTGATGGTGAAGGCGAAGAGGAAAATGAACCAGACCTGGAGTTGTACAGTGCAGACATTGGCAGAGTTGTAGTGATTGAAGGTTCAGACAAGAAGAGAGTTAAAGACAATTGGTTTCCTGGGTTGATCGTTATTCCATCAGCGCAACCTACAGTGCGTATTAATGTTAAAGACGAGTTCTTAGTGCGTTCTTTTCGCGATGGTCGTTACTATACAGTGCCCAAGAAGGAAATCATGGACTTCAAACGTGAATCTAAAGCTGACATGCCTTGTTTAAAAGAAGCCATTGACAAAGCGCTTAAGTATTTGGACCAAGACGAATTGCCGCCCTACTGGGAGAGAAATTCGCTGTTTAACTCGCAAAGTCAAATATCAGACTCCGACGACAACTATTCCGATAGTTCGGACGACGAGCCGACCGAAGAAAAAGACCATTTTGTCGCTCAGTTGTACAAGTTCATGGATGACAGGGGGACTCCCCTGAATAAAACGCCAACGATTGCCCAGAAAGATGTCGACTTCTATAAACTGTTTCGGCTTGTGCACAAAATGGGAGGATACAATCGCGTATCTAGTAAGAACAAATGGAAATCTGTAACGGTGCGACTGAAATTACCTCAAACGCTAACTGCGTACAATCAGGTTAAGCAGGTTTATAAAAAGTGTTTGCTTAGTTATGAAGGTTTCTATAGAACGCTCGGGTGTACCATGATGACGCCAGTGAGACACGCGAAAAAAGATAGAGGCAGGCCGCTGATTCGTGATAAAGACCGAATGACGCCTGTGCAAAGCCCTAAGCCAGAGAAGGAAAAGGAGGATGAGCTTGCTGAAGTTAAAAAGGAAAAGGAGGACGAGGAAAAGGACAAGGAGAAAGATAAGAAGAAGGACGAAGATGCGATGGCAAGGACTCCAAAGCCGAAAAAGCCGGAAAAGCAAACAAAGACTGAGGACGAGAAGAAAATTGTGAAGAAAGAGTTGATGCCGGAATCCAGTGATACCAGTAGCGATGCCACCGATCAATCCGAAGTTGCGGGTCCTTCTAGAGAGCTCGGAAGACTTAAACGATCTGAAACCAAGAAAGAAAAGAGAGTCAAAGCTGCTACTGGTGATAAAGTGAAAGCCCTCGTTGAGAAGTTTGAAGAACATTCAAAGAGAATTGACAAGGAAAAGGAAAAAGATAAGAGTAGAGATGATGAGAAAGAGAAGGAAAAGGAGAAAGaaatagaaaaagaaGGCAAAGATAAGCAATCACAGCAAACCAGGTCGAAATCATCACAGCCAAAAGTCAAAGACCGGGAGAAGGACAAAGAAAAGGATAAGGAAAAGGAAAAAGAATCTACGCCAGAGAGACGTTCCCAAGAAGTCAAGACACCAGTCAAGGAATCTAGAGAATCTAAAACAATTATAAAGTCGACGAAAAAGTCATCTTCTGATGATGATAAGGAGAGGAAGCGCGGACGTAAGCGCGGCAGTCCCGAAGAAAAGGAGAAGGAAAAAACTAGCAGTGAATCGTCAGATACGCCTCCGACGCCTAGTACATCTTCCAAACGTTCAGTTAATATTGGTGATAAACTGAAGGTGTATTATGGGCCTACGCACGAATCTAAAGTAACCTATGAAGCGAAAGTCATTGAAATAGATAAGGATTCATCCGGGCAGTCCATGTATCTAGTGCATTACACTGGCTGGAATAATAGGTATGATGAGTGGATAAATCTAGGTAGGATTGCTGAGAACCTCAGCGCTACATCTAAGGCCAAGCGGTTGAAGCAGAGCACGTCCCCATCGACAGGCGTAAAATCAAGCCCCAAGCCTCCGGTTAAAAGAGGACGCGGTATGTCTATAACCGGCCGGAGCACTGTTCAGGAAACGCCGCGTTCTACAACGCCATCGAGCGTAACTTCTTCCTCGAGCCGTACTAAAAGTCCCGCAACTCCCGTGTCGAGGAGTCGTAGCAATCGGGGCGAAAGCACGCGGAGGACACGCCGTACTTCAGCACACACTGATATATCTGTTCAATCCGAGTCGGACGACTCTGACGAGGACGATAGAACTGAAAGTGATATCGAGTTAACGCGCACGCGAAGTGGTAATAAATCAGAAGAAAATGAATCTAAACTTAAGCGCAGGCATGTTAAACCTAAAAGTGAAAAGAGGAAAGACGACGATGACACCGAAAAGGAAGAAGACGAGAAGGAGAAGCCGAAGAAACCGAAGAGATTTAAGAAAGTTGCTGAAATTAAGTCTGACAGCGAGGACGAGTCGGTGCTTAGCACGCACGCGAAGGGTCGCGATTTTGACTTATTGCAAATACGCTCGGAATTAAAAGGTTTTCGCAAGGAATTCCAACCCGCAGCGAATATTACAGAAAATAACGAAAAGGACGCCACGTCTTCAGATGATTCAGCGCCTCCCGTTGAAGGAGAAAGGGAGAAAGAAAAGGAACCCGACAGCGAACCGGCAGAAAagaaagaaaaaattattgaaaAGTCATCGAGCTCCGACGATATTTACGAGTTCAAGGAACCTGAACCGTTTGAATTTGGAAGTAGAAAGATTGTTGATGATAAAACTAAGAAACGCGTACCGAGGGTTTTCGAAGAGGTGGAAAAATCGCCTCCTAAAAAGAAAACTCCTAAGTCTCCAGCAAAACAGGAACCCAAAGAAGATCCCGATAAAAAGAGATTTAAGAAAATACCTGTTTCGCCGAAACCAGTTGAAGAACCCCTCGAGGATATCGAAATTATGAAAGAAATGAAGGAGGAGAGGAAAGAAGTGTCGGACGATCCTTTTGATAAATTAGTTGAGTCGCCTTCTTTCCATGTGGGCAAATCGACCAATTCGACGCCGGAAAAACCTCCAGTTGAAAAACCAAAAGTTGAAGCTCTTCCAGAACCTATTAGTATGTTTGATTCGCCGGACTTCAATGAAGAAAATAGTGATGATCGTATGGATTTGTCCGACACCGAGGAACGTACAACCGATTTACAGTTCACTCGCTCCAGCCCTCTCTTCACTAATTTCGGTAAACCATCTCCGGATCATATAGAGGCAGCTTGCGATAGCTTTGGGCTCTCGAAAATCAAAGATATGAAACAGAAGGATAGCGAAGATGATGACGATTCTAATCTGCAAGCATCCATCCAGCGTGCTCAGTCGACACTTACGAATTTATTGGACTCGAGTCCTGCTGAGTCCGAATCTCCCAAGGCTGAATCGACGGCAATTACGATCAATCGTGTAGATGCAGAAGATGTCGAAATGGAGATCGTGGATGAAGTCAAAGACAAGGTGCAATTGCCTAAGCAGATATCAGCCGTTTTCCAAGAATCTGACAGTTCAATTTTGGAAGATTTATACAACCCACCCCCGAATTCTATATCTAAATCAGAAGACATTAAAGATCTTAATGTTAAGACTGGAACCAAGATAGCTGATTCGATTCTGCAGAAAttaacaaaaaataaggAAATTGGCTCTCCAAAACCGGTCAGAATCGAAGACCCTGTTGGCGTTTTGTCCGAGGAGAAACCGGAAACTTCACCGGCTGTACCGGAAACAAAGATCGAGACTAAAATCATCACTTATGTTGAAGAACCCATCAAGTCATGCAAACTTGAGACCAAATCAATATCGAAAATCGAATCCATTGTGGAGCCGCCAGTAACGCCTACCAAATCTAAACCCGAGCCAAAACCAAAAGCGCAGCTTGTTAAGAAACTCGAGCCGGAACCCAGGAAGCGTAGTTATAAGAAATTCGTTAGTCCGGAGTTCATTGAAAGTGATAGCGACGACAGTGATTCGGAAAATAGGCTAGTGATTGCTAGATCTGATGATGAATCAGAATCTAGTGCGTCGTCCGATAAACCGGAACCAGAGGAACCTCCGACGGAAACGAAGGTTATTAAGCTGTTGGAGGAACCGTCCGAAGAACGAAGTTTCAACATTGGCGATAGCAAGATGGATTTCAAGGAGGAGGAGGTTAAGACTGAAGAGCCCGAAGAGGAAAGCAAGGAGGAAGAGCCAGATTCTCAACTGCATTCGACGCTTCTCTGCGAGGAAACGTTCCCCGGGAGTCCCGCGCCGGCACCAACCAACGAGAGCAAACCAAAGTCGAAAGCCGTCATGGAGATGCCTTTTGCCAGCGCACCGAGCAGCAGTAATAGTAAAAACGTTATGTTGCAACAAGAGAAGCAGCCTTCTCCTGGGCCAATCGTACTACCGCTTCCAAACAACCGTGATGTCAACGCCGTCTTAGACAACACGCCACCCACAACACCTGAGAGTACAATCAGTAATTTATCGCCCAGAGGTGAAATCGGAGGTTTGTCGCCGAATAATGCAGATAACGAGAGTTGCAAATCTACCGAGGCTGATGACTACTCCACGCAACGTCGCGCTGCAGCGACAAAAGTCACAAATTACAGCGAAGAAGATTCATTAAATTGCGAGCCCCACACCAGTGCTAAGAAGCGTGAAGAACTGCCGTCGCCTTGCAAGAAGCGTCGACGCTCCTGCAAGGGTGAAAGCGAGGTACCTGTCAAGCGGGGGCGTAAGCCAAACGCGAATAGATCTCGACATAATAGCGACAGCGATGACACCTCGGAACACTCGCTGCACACGTTAATGCCCAACTACGAATCCAGACTTACGCGATCTCCAAGACCTTTGAAGTACAACTTTTACGTTGATTTAGATCCAAGTTTGGATAGTGCCGCTCGGATAGCAGTATTACTACAAAAACTACAAGACTTGCGAAAGACATATGCGGATGTCAAGGCTGAATTGGTTACAATAGAGCGGAGACGTAAGAAAATTAGGAGAAGAGAACGGGAAGCTCTGAAAGCGGCAAAACAAGAAATGGCGTGCACATga
Protein Sequence
MQADDPPYLHVGTAVSAKYKGAFCEAKVSKVVRTVKCKVTFKMGLGTATVSDEAIRGPIRVGQTVSARHPERKEYIDCLITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRSRQLKEDSSDGEGEEENEPDLELYSADIGRVVVIEGSDKKRVKDNWFPGLIVIPSAQPTVRINVKDEFLVRSFRDGRYYTVPKKEIMDFKRESKADMPCLKEAIDKALKYLDQDELPPYWERNSLFNSQSQISDSDDNYSDSSDDEPTEEKDHFVAQLYKFMDDRGTPLNKTPTIAQKDVDFYKLFRLVHKMGGYNRVSSKNKWKSVTVRLKLPQTLTAYNQVKQVYKKCLLSYEGFYRTLGCTMMTPVRHAKKDRGRPLIRDKDRMTPVQSPKPEKEKEDELAEVKKEKEDEEKDKEKDKKKDEDAMARTPKPKKPEKQTKTEDEKKIVKKELMPESSDTSSDATDQSEVAGPSRELGRLKRSETKKEKRVKAATGDKVKALVEKFEEHSKRIDKEKEKDKSRDDEKEKEKEKEIEKEGKDKQSQQTRSKSSQPKVKDREKDKEKDKEKEKESTPERRSQEVKTPVKESRESKTIIKSTKKSSSDDDKERKRGRKRGSPEEKEKEKTSSESSDTPPTPSTSSKRSVNIGDKLKVYYGPTHESKVTYEAKVIEIDKDSSGQSMYLVHYTGWNNRYDEWINLGRIAENLSATSKAKRLKQSTSPSTGVKSSPKPPVKRGRGMSITGRSTVQETPRSTTPSSVTSSSSRTKSPATPVSRSRSNRGESTRRTRRTSAHTDISVQSESDDSDEDDRTESDIELTRTRSGNKSEENESKLKRRHVKPKSEKRKDDDDTEKEEDEKEKPKKPKRFKKVAEIKSDSEDESVLSTHAKGRDFDLLQIRSELKGFRKEFQPAANITENNEKDATSSDDSAPPVEGEREKEKEPDSEPAEKKEKIIEKSSSSDDIYEFKEPEPFEFGSRKIVDDKTKKRVPRVFEEVEKSPPKKKTPKSPAKQEPKEDPDKKRFKKIPVSPKPVEEPLEDIEIMKEMKEERKEVSDDPFDKLVESPSFHVGKSTNSTPEKPPVEKPKVEALPEPISMFDSPDFNEENSDDRMDLSDTEERTTDLQFTRSSPLFTNFGKPSPDHIEAACDSFGLSKIKDMKQKDSEDDDDSNLQASIQRAQSTLTNLLDSSPAESESPKAESTAITINRVDAEDVEMEIVDEVKDKVQLPKQISAVFQESDSSILEDLYNPPPNSISKSEDIKDLNVKTGTKIADSILQKLTKNKEIGSPKPVRIEDPVGVLSEEKPETSPAVPETKIETKIITYVEEPIKSCKLETKSISKIESIVEPPVTPTKSKPEPKPKAQLVKKLEPEPRKRSYKKFVSPEFIESDSDDSDSENRLVIARSDDESESSASSDKPEPEEPPTETKVIKLLEEPSEERSFNIGDSKMDFKEEEVKTEEPEEESKEEEPDSQLHSTLLCEETFPGSPAPAPTNESKPKSKAVMEMPFASAPSSSNSKNVMLQQEKQPSPGPIVLPLPNNRDVNAVLDNTPPTTPESTISNLSPRGEIGGLSPNNADNESCKSTEADDYSTQRRAAATKVTNYSEEDSLNCEPHTSAKKREELPSPCKKRRRSCKGESEVPVKRGRKPNANRSRHNSDSDDTSEHSLHTLMPNYESRLTRSPRPLKYNFYVDLDPSLDSAARIAVLLQKLQDLRKTYADVKAELVTIERRRKKIRRREREALKAAKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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