Basic Information

Gene Symbol
Xbp1
Assembly
GCA_027574945.2
Location
JAODGD020034827.1:1561-3063[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.7e-13 7.4e-10 39.2 19.2 2 64 47 109 47 123 0.88
2 3 8.4 9.3e+03 -2.8 0.9 15 24 240 249 238 251 0.57
3 3 2.9 3.3e+03 -1.3 0.0 28 40 296 308 292 312 0.66

Sequence Information

Coding Sequence
ATGGATCTGGATTACAACGTATTGCGGCGCATTAATGAAAACGAACAGCGTAATTACGTCGTTCTCGAGGAGGAAGACGACGCCTTCATGGACGCATTCGCGCGACCCCGGAAGAGGCGTCTAGACCACCTCACCTGGGAGGAAAAGGTTCAACGAAAGAAATTGAAGAACCGAGTGGCGGCGCAAACGTCACGGGACAGAAAGAAGGCAAAAATGGAACAACTCGAAGACAACTTCAACCAGCTGATGGAGCAGAACAAGAGAGTGCTGGAGGAGTGTGAGAACCTCAAGAAGTTGAACGAGGGCATCCGCAAAGAGAACGCGGAACTCCGACAAGCGTTGCGTCAGTCCTGTCCGAGCTGCCAGCAGTTTCAGAGCCCCGTCGTCAAATGCGAAGGCCACCTGAGCGGATCTACAGAGTCCGATTTCCTCCTTCTGCAGCAAGGAGACCTCCTCGACGAGCTCAACAAAGACGTCGATCTTGGAAGCTTGGACGAACTCACACAAAGCCTTCTCGCTGACATCGCCAGCGACCTTGATGCATTGGATCAAGATGCTAAACCACAAGGAGCGGCTGGTGAATCCGACGACGTTGGCGAAGTGGTGGGGACGTCATCAGAACAACTGGAACCCGATGGAGGTGGCGGTGGCGTAGAGGAACGCTACAGACTCGCGGAGTTTCTGCTTCTGCACCACGACTATACCAGCACGTCGCCAGCGCCATCAAGAGCGAAAAAGAAACGAAAGCTTAAACCAATCAGGCCGAAGTGCGTCGCAGACGCGACGACTTGCCCCACCCCCACTCCCGACGCCCCAGCGACGGAAACGCTGTGCGGATATTACGACGAGGCGGAAAACTGCATAACGATCATCGTCGACGACGACCAAGCGATGCAGGACACCGTGGCGCAGCTCGAGGAACAAATCACGGCCGCCGGCGGCGCAACGTCGTTGGACCGCAGTCTATTGCAGGCACCGCCCACGCGCGACAGTTGCTCGTCGAGCGCGTCAGATGGCGGCTACGAGTCCCTCGACTCGCCGAGCAGTTTTCACGAAGACCTCTTCGACTCCACCGTCTCCGAACTGTTCCCGCAATTGATCTAA
Protein Sequence
MDLDYNVLRRINENEQRNYVVLEEEDDAFMDAFARPRKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKAKMEQLEDNFNQLMEQNKRVLEECENLKKLNEGIRKENAELRQALRQSCPSCQQFQSPVVKCEGHLSGSTESDFLLLQQGDLLDELNKDVDLGSLDELTQSLLADIASDLDALDQDAKPQGAAGESDDVGEVVGTSSEQLEPDGGGGGVEERYRLAEFLLLHHDYTSTSPAPSRAKKKRKLKPIRPKCVADATTCPTPTPDAPATETLCGYYDEAENCITIIVDDDQAMQDTVAQLEEQITAAGGATSLDRSLLQAPPTRDSCSSSASDGGYESLDSPSSFHEDLFDSTVSELFPQLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-