Etor003012.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- znf711
- Assembly
- GCA_949318235.1
- Location
- OX439127.1:56885192-56902672[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.5 1.1e+02 3.9 3.0 1 22 218 239 218 242 0.90 2 14 3.4 2.4e+02 2.8 4.3 1 22 392 413 392 416 0.90 3 14 0.57 40 5.3 0.5 1 22 427 448 427 451 0.91 4 14 0.014 0.98 10.3 0.9 2 23 473 495 472 495 0.95 5 14 0.21 15 6.7 4.1 1 23 505 528 505 528 0.94 6 14 0.065 4.6 8.2 0.9 2 23 575 597 575 597 0.94 7 14 0.032 2.3 9.2 0.1 1 21 602 622 602 623 0.95 8 14 1.5e-05 0.001 19.7 4.2 1 23 640 663 640 663 0.95 9 14 0.019 1.3 9.9 0.3 1 23 688 711 688 711 0.94 10 14 0.31 22 6.1 4.0 3 23 722 742 720 742 0.92 11 14 0.036 2.5 9.0 1.5 1 23 747 772 747 772 0.95 12 14 0.0022 0.15 12.9 0.7 3 23 780 800 778 800 0.98 13 14 0.006 0.42 11.5 1.0 3 23 808 830 806 830 0.91 14 14 0.0013 0.094 13.6 2.8 1 21 836 856 836 861 0.93
Sequence Information
- Coding Sequence
- ATGGACGACGCGTTTGACGATGACACTCATATATGTCTTAAGTGCCAGTTGACCATCGAAGGCCTTGATAACTACGTTATTCACAGACGTAATCGATGTGGCACTGTACTGATTCCACCTGCTCTCAATCTGGGTCCTGCCACGAGGCTCGCAGACGAAAGGATCTTGCGCTGCTCTCCTGAGAACTCGCCATCGAAGGCTCAAGACTTTTTCAGCTCTCTTGAGTTGCGCAGCAGCTCAAAAAATCGTCTTGATGATTTTGAGATTGACTTCGATTTAAACTCAATCCAAAAACCTAGCTTAGATATGCCATCGAGTTCTACTTCTAAATACAACTTTGCTCGAGAAATGGACCTAGATTCCAACTTTGTTGAGCATATTGAGCTTGACATAACGAAAGCCACACGTAAAACCAACTTTGAATCTCTTGAACTGGATCATGACACTTTAATGAATGATCCTAATCTCATTGCTATTGATAGTAAGAGGAGTTCAATCTTAGACTCCGATATATTTTCTACAAACAGTATTGACAAAGTAATCAATTCAGCCCTGGAACCTTCAACTTACTTGATACCTCCTCCAACACATACCTCCGGCAAATGGATGCCTGGCAAGTCTGGACACCGCAAATACGGTAGTGATATACACTATTTTTGTCGAACCTGTAACCGTCGACTGTCGAGTCGCCTGTTGTACGAGAAACATCTCCACTCAGAGCTTCACTTCAAGCGGAAGGCTGAGGGCTCTGTGTACGACATGGAGGATGCACCAGCCCCTATCAGAGAGAAGAGAAGCACCGCTGGCAAGAGGACCACGCCACGTCATGTGGAAGCAGTGTCTTTGCCCGTCGCTGCCACTCGGGCCAGTGCATCACCTGTTGTAGAAGAGCAAGATACGATTATGGTTTTCCATGAACAGCCACCTATTAGTCGTACGTTTATGGTGCCCCAGGAACAGCCGCTTATTGGCCGTACGAAGGTTGTACGGCAAACTGTGCAACCACGTAGGATGCGATTACAGTCTTGCGGAGTGTGCAATGTTCGAGTGTCCCGTCACTTGATGGGCAAACACTTGATCTCGCACTTTCACTTCACCCGTGCCTACACCAAACCTGAAATTGCTCGGGAACTCATATTGAACAATATGCCCCGTATTGTCAAACATGCTCCATTCCAGTGTGCTTTGTGCCGTTACTACTGCAATTCTAATTACTACCTTCTACAACATTGGCACTCAGACATGCATCGCCTCAATGACAAAAAGtattatggCATATATTACTGCCAGCAATGTAAGGAGGAAGCGGAGGACTCTGCCAGCATGGCTCGCCACCTGTGCTCGGAGGATCATCTGCAAGTGGCTACGACTTTGAACCACACGGTCCCCATGATTGTACGCAAACGTACAGTGGTATCGTGCAGTCACTGCAGCAGGATCTTTGCTCTCAAGATTCAGCTCGTCCAACATCTCAAATTATACCATGGCTTTAATGTAGCACCAGAGCCGATTTTCTCCTGCAGTCAGTGCAGTTTCTTCTGCACGAAACGTCGTGCTTTGCagCGTCACGAAATCATCAAGCACCCGTCAACTCCAAATTGCACGTTCTTCTGTGGCGCGTGTGACGATACATTCACGAGCCGTGCAGAGTGCATGGAGCACCGCCGCCTGCTGTCGTGCCGCTTGAAGTACGCCACTCTGCGTGGTCGCGATGTACGTCGTCGTTGCAATATGTGCGGAGAGCAGTGCCAGGACCTTGCAGCCCTCAAGATCCACCTCTTCAGTCAACACGCAGGAGCTCTGCATCGATGTGAGTCATGTGGCTTGGAGTTTGCGATTTCCCAAGACCTGTCCCGACATGTGCGATTGGCCAAGTGTACGAGCAGATATTGCAGTGACGATACCAAGAGGAGACGATTCTTCTGTGACCATTGTGGCAAGACGTTTAGCAGACGTCGTAATCTGGCTACTCACTCGCTCACGTTCCATGCATCTGTCAATGTACCAGAAGCTGACATTCAGCTCGTGATGCCTACTCCACGTCGACCTCGTGTATTTAACTTCTTGTGCGATCTGTGTGGATACCGTGCTACTAGGAAACCGTTCATCCAGCGTCACATGATGTCTGCTCACTTCCCAGTTACTCGGACACGTGACTGGTGCTGCTCTTGCTGTGGCAAAGCCTTCTTTGATAAATACGCAATGCGTCAACATGAGAAGCTCCACCAGCCCAAGGAACACACTTGTAAGGAAGCTGGATGTGTGTTCTCGTGTAGGTATCCATCAGAGCTATCTCGTCATCTCGAGTCGGCACACACTGAGGATCGCAACTATGGCTGCCCCCAATGTCCATACCAAGCTAAAACCAGGTTCCAACTCAAaaaGCACGTCAAGACACACCAAGGCAAAAAAACGTTCCTGTGTGAAGTTCCCAATTGCAACATGAGCTTTGTCCTGTATGCCCATTTGCGTCGCCACACTCGCCTCCATACTGGCTCCAAGCCTTACAATTGTCCCTTCTGCGACTACAAATGTAACACTCTGGAAAATCTGAGAAAGCACATTATTTCCACTAGAAAACATCCTGGTGAAAAGATGTATCATTGCAAGTTGTGCAAAGATGCCGGTACTTCTCCAGTTTATTGCACGAACGTCGTCAACGAGTTCCGAGCCCATCTCCACTGTATCCATCCCACCTTGAATGTAGGTACAAAGAATATTCTGTCTTTCGTTATTGGGATTTGTGAGGACTTCCAGGCGCTTGCTGAACTGGAAAACTACAAGATTTCTCGTCAGGCTTCCGATATAAACAACACCCCAGATAGGTATGTCGACGCTAATAATTCATCAAAGACGACACATGACATGGACATTAATGCTAGCATTGACGTAAATTCAGGTAAAGTAACCACTGAATTACTTACTATTCTTCCCAAACCTGATGCTAATGGTCAGGCTAATACAAACGTAGTCAACACTAAACTTCCTGTTGATCCTGCCATTCCCCAGCCAACCCCAGCTATTCGCCTGTCAACCCCATCTATTCACGAGTCAACCCCAACTATTCGCCTGTCAACCCCGGCTATTCCCCAGTCAACCCGAGGGATTCGCCTGTCAATCCCAGCTATTCCCAGGTCAACTTCACCTCTCCGCCTGACAGTCCCATATATTCCCAAGCCAACCCCAGCTATTTGCTTGTCATTCCCAGCTATTCACCAGTCAACCCCAACTATTCACCTGTCAACCCAAGCCAGTCGCCTGTCAATCCCATATATTCACCTGTCAATCTCACCTATTCGCCTGTCAGCCCCAGCTATTCGCCTGTCAACCCCATATATTCCCAAGCCAACCCCAGCTATTCGCTTGTCATTCCCAGCAATTCACCAGTCAACCCCAACAATTCGCCTGTCAACCCCATCTATTCCTCAGTCAACCCAAGCCAGTCGCCTGTCAATCCCAGCCATTTGCCTGCCAACCTCAGCTATTTCCTATCCAACCCCAGCTCCTCATCGCAATCCTCGTTCAGCACCTCACTTACCATATGATCCTTCCAAAGAGGAATTCCTTCATCACCTTGAGCTATGTAATGTTCTCAAAGTACAACATCATATGGCTATTAAGGCATTTAATGTCAATAGTGATGATAACATGAGTTTCGAAACAAACTGTGATTATAAACGTGGTATAAATGTTCCCATGGTAGAAATTACACCGGACTATCAAATTCAGTTAGATGTAGGTGACAATGGAGCCCCATGTGTTATCTTTGTGCCATATGGTGATGACGACGATCAACATGACTTCACTTCAATATGTGACACAAATATAGTAGATAATTGTTTAACTGTAGTTTATCACGAAGACTCCGATTCAAGGAGTTCACAAGTTCGTGTAGATGAGCAGACTTATCTCTTACAAGAGACTCTCAGAAAAGCAATAGACTTTGACAATTCTGAAATTTAG
- Protein Sequence
- MDDAFDDDTHICLKCQLTIEGLDNYVIHRRNRCGTVLIPPALNLGPATRLADERILRCSPENSPSKAQDFFSSLELRSSSKNRLDDFEIDFDLNSIQKPSLDMPSSSTSKYNFAREMDLDSNFVEHIELDITKATRKTNFESLELDHDTLMNDPNLIAIDSKRSSILDSDIFSTNSIDKVINSALEPSTYLIPPPTHTSGKWMPGKSGHRKYGSDIHYFCRTCNRRLSSRLLYEKHLHSELHFKRKAEGSVYDMEDAPAPIREKRSTAGKRTTPRHVEAVSLPVAATRASASPVVEEQDTIMVFHEQPPISRTFMVPQEQPLIGRTKVVRQTVQPRRMRLQSCGVCNVRVSRHLMGKHLISHFHFTRAYTKPEIARELILNNMPRIVKHAPFQCALCRYYCNSNYYLLQHWHSDMHRLNDKKYYGIYYCQQCKEEAEDSASMARHLCSEDHLQVATTLNHTVPMIVRKRTVVSCSHCSRIFALKIQLVQHLKLYHGFNVAPEPIFSCSQCSFFCTKRRALQRHEIIKHPSTPNCTFFCGACDDTFTSRAECMEHRRLLSCRLKYATLRGRDVRRRCNMCGEQCQDLAALKIHLFSQHAGALHRCESCGLEFAISQDLSRHVRLAKCTSRYCSDDTKRRRFFCDHCGKTFSRRRNLATHSLTFHASVNVPEADIQLVMPTPRRPRVFNFLCDLCGYRATRKPFIQRHMMSAHFPVTRTRDWCCSCCGKAFFDKYAMRQHEKLHQPKEHTCKEAGCVFSCRYPSELSRHLESAHTEDRNYGCPQCPYQAKTRFQLKKHVKTHQGKKTFLCEVPNCNMSFVLYAHLRRHTRLHTGSKPYNCPFCDYKCNTLENLRKHIISTRKHPGEKMYHCKLCKDAGTSPVYCTNVVNEFRAHLHCIHPTLNVGTKNILSFVIGICEDFQALAELENYKISRQASDINNTPDRYVDANNSSKTTHDMDINASIDVNSGKVTTELLTILPKPDANGQANTNVVNTKLPVDPAIPQPTPAIRLSTPSIHESTPTIRLSTPAIPQSTRGIRLSIPAIPRSTSPLRLTVPYIPKPTPAICLSFPAIHQSTPTIHLSTQASRLSIPYIHLSISPIRLSAPAIRLSTPYIPKPTPAIRLSFPAIHQSTPTIRLSTPSIPQSTQASRLSIPAICLPTSAISYPTPAPHRNPRSAPHLPYDPSKEEFLHHLELCNVLKVQHHMAIKAFNVNSDDNMSFETNCDYKRGINVPMVEITPDYQIQLDVGDNGAPCVIFVPYGDDDDQHDFTSICDTNIVDNCLTVVYHEDSDSRSSQVRVDEQTYLLQETLRKAIDFDNSEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -