Etor008105.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- -
- Assembly
- GCA_949318235.1
- Location
- OX439129.1:50209943-50225608[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0042 0.3 12.0 0.3 1 23 428 451 428 451 0.97 2 13 0.039 2.7 9.0 0.4 2 23 454 476 453 476 0.95 3 13 0.0041 0.29 12.0 3.3 1 23 494 517 494 517 0.92 4 13 1.2 86 4.2 1.6 1 23 541 564 541 564 0.93 5 13 0.34 24 6.0 0.2 2 23 643 664 642 664 0.96 6 13 0.038 2.7 9.0 0.2 1 20 718 737 718 738 0.94 7 13 0.026 1.8 9.5 4.2 1 19 747 765 747 771 0.93 8 13 0.003 0.21 12.4 0.2 3 21 932 950 930 951 0.91 9 13 0.1 7 7.7 0.5 2 23 964 986 963 986 0.95 10 13 0.091 6.4 7.8 2.6 1 21 991 1011 991 1016 0.95 11 13 3.8 2.7e+02 2.7 0.3 1 23 1020 1043 1020 1043 0.89 12 13 4.4e-06 0.00031 21.4 0.7 2 23 1049 1070 1049 1070 0.98 13 13 2.8 2e+02 3.1 0.3 2 23 1168 1190 1167 1190 0.92
Sequence Information
- Coding Sequence
- ATGGAGACTATGGATTATACACAGCCCACTACTACagAGACAACAGAGGTGACTACAACTGATGAATGTACTGATGAAAATGAATCTACTACTCCAAGTGGTCCTAcagTGACAACAGTCCAATCTACTACTGTAGAATGTGAAGATCCCACAGGATCTACTGATACAACTGATTTCACAGTAACAACAGAAAGTACGACTACGACAACTGAATGTTGTGACACAGAAACTACGACAGATGAATGTACGATTGAGACTACTATTAAGGATAGCACGATCAGTACGACAGAAGAATCTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACAACGACAGATGAATGTGCGATTGAGACTACTATTAAGGATAGCACGATCAGTACGACAGAAGAATCTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACTACGACAGAATCGACTTCTACGGAGACTGATACAACGACAGATGAATGTGCGATTGAGACTACTATTGAGGATAGCACGATCAGTACGACAGAAGAATCTACGACGGAATCTACTTCTACGGAGACTGATACTACGACGGAATCTACTTCTACGGAGACTGATACAACGATAGATGAATGTGATACGACAACtgGTGAACCCGTAACTGCGTCGCCGTGTCAAGGTTCAACCACACCAGAGAGTGTATTGTCGACTTGCAGAGGTACCAGTGTTATCGTCTGCGAAGGCTCCACGACCACAGTTTCGCCACAAGGAGGCAGCTTCGTCAACAGTCAAGGCGCAAACACAGCTGCCAATGCCAATAAAGGCAAAGAGGAAGTAGTGACTACACTCACTGACGAGGAATGCCCGGACGCAGACAAAAATCCTAAACCATATTTGAACGAGACTGTGGAAGCTGCGTGGCAGAGAGAACAGCTGCGCAGGCAGGCAAGACTGTCATCTCCAACATCGTCCTCCACTTCTAGCACAACGTCTAAGCCTGGCATCACTACCAAGgaAGGACATCCCAGTAAAAAACGTCCAATTCTACCCACATGTGTAGAGAGATCTGACGCAGGTTTCATATGTCAGCTCTGCGGCAACACTTACCCAGGGCGTACGTCGTTCATGCAACACATCCGCTCTGAACACAGCTCTACCTGTGACGTATGCGCCAAAGTTCTCTCCTCAACACAGAAACTGAAAGATCATTTACGTTTTGTGCACGGCAAATCTCAAACCAGCTGGGAACAAAAATTATTCACATCTACAGTAAAATATTCTTGTACATTTTGTCATAAGATATTTGGATCTCAAAGTCTATTAGACAAACATACGATATTTAAACATTCAAGTATGGATTTAGAATCTAGTCAATCACAATCACAAACTGAAGAAGAAAATCTGGAAAATTGTTCTTATAAATGTGAATTTTGTAGTGatgaatataatacaaaattaaaattacgtgaaCATATTTTTGAAAAGCATATAGATGAAGAGGATAGTGAACCATCCTCATCTTCGTGCACTAACATCAAAGAAGACAAAATAGTTGAACCTACGGGACCCCCTGTAACAGCGTACGAGTGTCCACATTGCTTAACATTACACGCTAATAAAGatagatttaaaaaacatttaggTTTTAAATGGCCAGAATCATTCAGTGAACATCAAGTTAAGATTGATCCTCATGTTTTGGCAAGGCAAAAGGAAGCTGTGTCGTGTGAAGTGTGTGGGGCTAGAGCTGCTAACTTAGCGTTCTTACACACACATCAGTCCTCGCACCCTGAGCTAGACAGACCGTATAACTGTCCTAATCCATGCAACCGTAAGTTCTTATTCAGATGTCAGTTAGATCGACACGCGTTGATTCACCAAGTTGGAGCTCCCGTCAAGACCAAACATGAAGTTAAACCACCATCAAGTGGACCCCAGTGTGGTAGACATAGATGTAACGTGTGCAGTAAGCGGACACGTAGTGAGGCAAGATTACAAGCACACGTAGCATGTTGTCATAAAGGTAACGTTGAATATCGTTGTAAAGTATGTGATATCTGTTTTCCTAGTGCTAAAAGTTTAGGTAgacattgtaataaaaaagaacatttaagTAATATGGAAGAAAATCATGAACCTTGGGTATCACCAGAAACACCTAGCGTCAACTTACTTACACAACATACCCAATCTGTTAGACCTGATTCATTAGGTAGCTCTGATTCTGTAAGTACTTCTGATGCATTTTCTATGTACTTTCAATCACTACACAGCCTAGGATCATTAGATATGGCATTAGACATTGgtaataatcaatcaatatttgaAAACGTTGATGACGTGTTACCAACGAGAAGTTTCTCAACGGAAACTAACGTCATCTTACATGGAAGACCAGGAATAACTGAGGTCACAGAGATAAATGCAGCTGATAATACTGAAGTGGGCAATGAATTACAATTTCATACCTTACAGACGGTACCTGTTGAACCATTGAGTGAATTAGAAGCAACGTACTTACAAAATATGAAGGTAGAACCTTTATCTCAAACTTCATCAAGTAACATGGATGTACAACAGatCAGTAATTGTTCAGACTGTGGAAAGATTTTCTCTAGTGCTCATAGTGCTGCAAGACATGCTAAATTAAGCTGTCCTGGTAGAGATCCAAAATCTCTACAAGTATCTTGTCCACAATGTGATTTATTACTGCCAGATCGTAAAGAACTGCATAAACATAAACGTGAGATACACCCAGATACTTTATTCACATGTTCAGCGTgttcaaaaacatttttcttagcTCAAAGTCTTGCAAGACATCAGAAGGAAAGTTGTAGTCATCGTGAGACATTTCCCTGTAGGCAATGTAAACTTCTGTTGTCGTCAGTTGAAGATTTACGTAGTCATACGGCCGACAAACACCCCGGAATATTAGCAACGTGTGAAATATGTGGGAAAACTTTATCCTCGGCTCAAAGTTTACGTAGACACTTACGAAGTCATAAACCAGATGAGTTAGAACAAAAAGATGATAcaggtaataaaattaaatcaaagaaaaataatgttaaaagtaaCGTAGAGGGTGGAGACGACGATacatttgatataattaaaactgaTGATACGAGTAAAGACGAACAATCACAAGTGAGTAGTTTAGCGGATGATTTATTGAGTGATTTTGCATCTATATCTacaaatcaattatttaatgGTAATTTAAGTAATGGTAATGAATTACAAGAAGAATTTAATATTAgtgatatgtttttaattaaaaatggtgCGTTACAATGTGATTTTTGTGAGGCTTCGTTTTTAAGTgacaaattattattgcaacATTTATCAAGCCAACATTTTCCTAATACACAGTGGCAACCTGCTCAGCCACCCCCCACTACCCCCACCACCCCCACCCCTACTTCGACATCGTCTGTTGTCGCAAGTACTTCCACTCAAAACAATACTTACGACTTACCCAGTACGTCGTATTAG
- Protein Sequence
- METMDYTQPTTTETTEVTTTDECTDENESTTPSGPTVTTVQSTTVECEDPTGSTDTTDFTVTTESTTTTTECCDTETTTDECTIETTIKDSTISTTEESTTESTSTETDTTTESTSTETDTTTESTSTETDTTTESTSTETDTTTDECAIETTIKDSTISTTEESTTESTSTETDTTTESTSTETDTTTESTSTETDTTTESTSTETDTTTESTSTETDTTTESTSTETDTTTDECAIETTIEDSTISTTEESTTESTSTETDTTTESTSTETDTTIDECDTTTGEPVTASPCQGSTTPESVLSTCRGTSVIVCEGSTTTVSPQGGSFVNSQGANTAANANKGKEEVVTTLTDEECPDADKNPKPYLNETVEAAWQREQLRRQARLSSPTSSSTSSTTSKPGITTKEGHPSKKRPILPTCVERSDAGFICQLCGNTYPGRTSFMQHIRSEHSSTCDVCAKVLSSTQKLKDHLRFVHGKSQTSWEQKLFTSTVKYSCTFCHKIFGSQSLLDKHTIFKHSSMDLESSQSQSQTEEENLENCSYKCEFCSDEYNTKLKLREHIFEKHIDEEDSEPSSSSCTNIKEDKIVEPTGPPVTAYECPHCLTLHANKDRFKKHLGFKWPESFSEHQVKIDPHVLARQKEAVSCEVCGARAANLAFLHTHQSSHPELDRPYNCPNPCNRKFLFRCQLDRHALIHQVGAPVKTKHEVKPPSSGPQCGRHRCNVCSKRTRSEARLQAHVACCHKGNVEYRCKVCDICFPSAKSLGRHCNKKEHLSNMEENHEPWVSPETPSVNLLTQHTQSVRPDSLGSSDSVSTSDAFSMYFQSLHSLGSLDMALDIGNNQSIFENVDDVLPTRSFSTETNVILHGRPGITEVTEINAADNTEVGNELQFHTLQTVPVEPLSELEATYLQNMKVEPLSQTSSSNMDVQQISNCSDCGKIFSSAHSAARHAKLSCPGRDPKSLQVSCPQCDLLLPDRKELHKHKREIHPDTLFTCSACSKTFFLAQSLARHQKESCSHRETFPCRQCKLLLSSVEDLRSHTADKHPGILATCEICGKTLSSAQSLRRHLRSHKPDELEQKDDTGNKIKSKKNNVKSNVEGGDDDTFDIIKTDDTSKDEQSQVSSLADDLLSDFASISTNQLFNGNLSNGNELQEEFNISDMFLIKNGALQCDFCEASFLSDKLLLQHLSSQHFPNTQWQPAQPPPTTPTTPTPTSTSSVVASTSTQNNTYDLPSTSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -