Etor019303.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- -
- Assembly
- GCA_949318235.1
- Location
- OX439135.1:24519591-24531427[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.069 4.9 8.2 0.9 1 23 9 32 9 32 0.95 2 13 0.0082 0.58 11.1 2.9 2 23 40 62 39 62 0.94 3 13 0.006 0.42 11.5 2.2 1 23 73 97 73 97 0.97 4 13 0.0086 0.61 11.0 1.5 2 23 106 127 105 127 0.97 5 13 0.035 2.5 9.1 0.1 3 23 196 217 195 217 0.91 6 13 0.00034 0.024 15.4 1.3 2 23 288 309 287 309 0.95 7 13 6.4 4.5e+02 2.0 0.8 5 20 502 517 500 519 0.91 8 13 0.0097 0.69 10.8 1.2 1 23 742 766 742 766 0.97 9 13 0.11 7.8 7.5 3.3 1 23 774 796 774 796 0.99 10 13 0.25 18 6.4 3.0 3 23 967 987 967 987 0.96 11 13 0.01 0.72 10.8 0.3 1 17 1108 1124 1108 1125 0.91 12 13 0.0088 0.62 11.0 0.3 1 23 1163 1185 1163 1185 0.98 13 13 0.00018 0.012 16.3 1.5 2 23 1196 1217 1195 1217 0.95
Sequence Information
- Coding Sequence
- ATGTCAGCCAAGCAATTCCAGTGTTTTCCGTGTCAATATTGTGCACTGAAGTTCACCTCTGAGGTTTCTGTGGCTCGTCACGTCAGCTCTTGTCACTCTGGCAGCAGTAAGCAGCTATCTTGTCATTATTGCAACAGACACTTTGAGAGCAAGCCATTGTTGGACACTCACGTCAAGCAGGCTCACATCCCCACAACTGTCAACAATGTCAAAGTATTTACTTGTCCTAAAAAATCTTGTAGTCTGACGTTCACTTCGTCAAAAACCTACAACAAACACGTTATCACACACAAGAAAACTAAAGTTACAATTTTGAAATGTGAAACTTGTTCAAAGTCATTTTTAAATGAAGACAAACTTAGGTTGCACGTCAAGAAACatgaaaatgtaaagaaaattacCTGTACTGTAAAACCTAATGGGAACCAGGGGCAGAGCAAGAGTGGGGACGTACAAAATACATTAGAGGTATTACCACCCACCACCTGCTACCCCCCGACATTAACATTGCAGAATAAGAAATCGCTCCCTCCAAAATTTTGCGCTACATCTGCCTCTGACGAGAGCTTAATTCTTGCTAATAATTGTCAATATTGTGCTGAGAAATTTATTGATTCCAAATCATTAGTGGCTCATGTAGATTATGCGCataatgaagaaattaaaattaccgGAACTGAACATGTGAACAGTGATCAAAATAACGGTGATTTTGTTAGTAACAATGAAATGTCAAATAAGGTTCCAACACTTGATATTGCCTATCAATCATTTGATCCTGCAATAATTGGCTACAAGGCAACTTCAGTTGTGACAACTACTGTGGAAAACACCGTAAATGTTGCCAAAACAGAGAGTTGCAAGTGTGGCTTCTGTGATCAGGTGTTCAGTTCTAAAATGTTGTTGCAGTCGCACATTGCTCTGCACTTGAGAAACACTTGTTTACCTCTAGCAGAAAATACAGAAAGTATTCGTCAGAAATCAGTTAAGAAGAATCTCTCAATTCAAACAATTAAAGAAGaacctaaaaatttaaaagacacaTTTGAAAATCAAACTTCAAAATATCTTCAAGATGAACATCTGGATGTAAATCTCGGCCTAAGTGGTGAAAATTATGAAACTATTTTGAGTAATTCTGAAGAAATATTATCATCTTCAGCAGTCACGTCTCAGAATTGTCAAATAGTTCATCATAATGTTGATATTAAAACTGAAAAAGCCAGAGGAGAAGATGTTGTTCCTTCAACGTCAAAATGCCATGAAAATTATGAACTTCGagatgaaaatatatttgaccACATGATTGATATAAAAGATGAAGAACTTTcACGTCAAGTCAAGATGCCGAGGAAGTGCGTGGTGGGGGGTTGCAAGAACTACGACGATGATCGGAACTTTTGGTTTCACAGCTTGGGACCAATCATTAGAAACAAAAAGAGGATGCAAGAATGGAGCAAAGCATTAAAAATCCCAGCCACGTACCTAACTCCACGCCAAATAATCTGCAGCAAACATTTCAACATGAAAACTGACTACTGCCAGCATAACATGAGAATGAGGGAGCTCATGCCTCATGAAAAGTTCGTCGTACCAAAGTTAATTGAAACTGCCGTACCTATGTCGTCAACGTGTGCTCCTCTGACCAACGTACAGAAGAAAAGATTTGGAATTGATAACAGACAGAAAAATGCTGAGCCTATTCTAAGTGAGAGGCAGCGTCGGAGTATTAGGGAGCAGAAGCGTCAGAGCAGCGATGTGGAGGCTCACTCCAGTGATAACGTTTCTCCCTCTACGTCTCTATGTGCTCCACTGAACAGCGTACAGATACCAAGTCTTGTAGAGCCTGCCGTGAGTAGCAAGCAGCAGCGTCAGAGCAGCAATACGAGGCAGCAGCGTAAGAGAGCAAGCGTAGTAGAGGCTCACTCCAGTGCTTACGTTACACCCTCTATTTCTCCCACTTACAATCCAATAAGCTATGAACCCCCCTCATCCCCAGCCCTATCACCCCTAACACACACTTTTGAGCCACATTTCCTGGACCATGCAATTGACACCACCCCTACTGGATCACCCCTAACTCACACATTTGAGCCACATTTTCTGGACCCTGCAATTGAAGCCATCCCTACTGAATCATCCCTAACTCATAGTTTTGAACCACATTTCCTGGACCCTGCAATACTAGCGTGCCAAGCTAAATATGGCAACAGTGTACAGCTATATTCTTGTCCTAAAGAATCTTGTAATCTGAcgttcacaaaattaaaaacattcaacgAACACATGATCAATCACGAGAAAGGAGATATTGCACTTTATAAATGTGAAACGTGTTCCAAATTATTTGTAAACGAAGAGAAATGTAAATTGCATATTCAGACACACGAATATGAAGAAGCAGAGTATCTTGACGAGAGTTCATTGCTTCAAGATCATTATGAAGAAGCAGGATATCTTCACGACAGCCCATTGCAATTAGatcatgataataattatggtacTGAAGATTCAAAGTCACAAATAAATAGAAATGAACAAATCAATATcgtacaaaattttgaaagcGTAGAAATTGGTTCAAATCTCACTGAATCAGAAccaaaaaatgacaataattgtGATCCACTTTCATTTGCAGATAAAAAAGTTGAAGTTGATTTTAATCATAAGTTACTAGATCCTGCAATATATGGTTACAAGGCTACTTCAATGTTACAAAATAACACgcaaatatcaattaaaatggTGAAATGTAAAGCCATAGGCAATTCTTCCATTGAAGTTCCAAGGAATTTAAACCCTGCCATTAAAACTTTCAATGGTCATGTCAGGAGGTGTCGTAAAAATAGTTCAATTGTCACTCAAGAAGTCCCTAAGTACGCCAACCACCTTGGGTGTCATTTTTGTAAAGAAACATTTCCAACTAAAAATTCGTTAAGTTTTCATATTAACGAACATTTAGTGACAGAATTTAAAGCTGAATATAGGAAAGATTGTCATCAATTTGAAGCTAGATATCGGAATGATTCTCATCAATTTGAAGCTGTCTATATTAAAACTGCGGCTAAAGAACAGAAGCAAAGTAAGAATTTGGTCGTGAATGAAGATAACGACGTTGATATGCGTGATCCGTTGGAAATCAATGAAGTTGGCGAGATATTGGCACGTTGTGACGATGTATCAATAGAAAAAGTGGTCACTAATCAATCAAAACAAGTCAAACCTCACAAGGTGACGAAATGTGAGTcgtgtattaaatattatcagtCCAACCATGATTATGTAGTAGACGCAAAGTTGCAAACTAAGAAGTTTCCTTACCAATGTGGCAAATGTGGTCAGGTATTCAGAACTGTGGAGCAGTTACATAAGTACATACAGAAATTGAGAGACGTCACGTGGCACTGCAAGTTTTGTAAAATGTCCAAGTTCTCTGATTTAAAAGGGTTGACAAACCACTATGgcaaatatcacaaaaatatttacaaatgtcCAATATGTAAGCAGCTAGAGTCCACCATTTCTAACTTGACGTTGCATATCAAATCTCACAAAATTGATGATAATACAGTAGAGAGTTGCAAGTGTGGCTTCTGTGATCGGGTGTTTAGTTCTAAGATGTTGTTGCAGTCACATATTGCACTTCACTTGAGTATTCATCAAAACACAGCACAAAATACACGAACAGGCCAGATGGGCCAAGGTGATGTTTCTAATAGTAACAACTGTGGTGTGGCAACTCCAGCAATGCAAGTAAAATCAAGTCACTCAGAGCAAGtagaaatacaaaatcaaacTTCAAAATGTCGCCCAGATGAATGTACattatttgttgaaaaaattgaaattgtggAAGAACCATTAATTTACGGTGAAGAAGTTATAGATTTagattaa
- Protein Sequence
- MSAKQFQCFPCQYCALKFTSEVSVARHVSSCHSGSSKQLSCHYCNRHFESKPLLDTHVKQAHIPTTVNNVKVFTCPKKSCSLTFTSSKTYNKHVITHKKTKVTILKCETCSKSFLNEDKLRLHVKKHENVKKITCTVKPNGNQGQSKSGDVQNTLEVLPPTTCYPPTLTLQNKKSLPPKFCATSASDESLILANNCQYCAEKFIDSKSLVAHVDYAHNEEIKITGTEHVNSDQNNGDFVSNNEMSNKVPTLDIAYQSFDPAIIGYKATSVVTTTVENTVNVAKTESCKCGFCDQVFSSKMLLQSHIALHLRNTCLPLAENTESIRQKSVKKNLSIQTIKEEPKNLKDTFENQTSKYLQDEHLDVNLGLSGENYETILSNSEEILSSSAVTSQNCQIVHHNVDIKTEKARGEDVVPSTSKCHENYELRDENIFDHMIDIKDEELSRQVKMPRKCVVGGCKNYDDDRNFWFHSLGPIIRNKKRMQEWSKALKIPATYLTPRQIICSKHFNMKTDYCQHNMRMRELMPHEKFVVPKLIETAVPMSSTCAPLTNVQKKRFGIDNRQKNAEPILSERQRRSIREQKRQSSDVEAHSSDNVSPSTSLCAPLNSVQIPSLVEPAVSSKQQRQSSNTRQQRKRASVVEAHSSAYVTPSISPTYNPISYEPPSSPALSPLTHTFEPHFLDHAIDTTPTGSPLTHTFEPHFLDPAIEAIPTESSLTHSFEPHFLDPAILACQAKYGNSVQLYSCPKESCNLTFTKLKTFNEHMINHEKGDIALYKCETCSKLFVNEEKCKLHIQTHEYEEAEYLDESSLLQDHYEEAGYLHDSPLQLDHDNNYGTEDSKSQINRNEQINIVQNFESVEIGSNLTESEPKNDNNCDPLSFADKKVEVDFNHKLLDPAIYGYKATSMLQNNTQISIKMVKCKAIGNSSIEVPRNLNPAIKTFNGHVRRCRKNSSIVTQEVPKYANHLGCHFCKETFPTKNSLSFHINEHLVTEFKAEYRKDCHQFEARYRNDSHQFEAVYIKTAAKEQKQSKNLVVNEDNDVDMRDPLEINEVGEILARCDDVSIEKVVTNQSKQVKPHKVTKCESCIKYYQSNHDYVVDAKLQTKKFPYQCGKCGQVFRTVEQLHKYIQKLRDVTWHCKFCKMSKFSDLKGLTNHYGKYHKNIYKCPICKQLESTISNLTLHIKSHKIDDNTVESCKCGFCDRVFSSKMLLQSHIALHLSIHQNTAQNTRTGQMGQGDVSNSNNCGVATPAMQVKSSHSEQVEIQNQTSKCRPDECTLFVEKIEIVEEPLIYGEEVIDLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00630614;
- 90% Identity
- iTF_00630614;
- 80% Identity
- iTF_00630614;