Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439132.1:16471651-16474782[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0026 0.19 12.6 0.1 1 23 143 166 143 166 0.97

2 15 0.042 2.9 8.8 1.4 1 23 259 282 259 282 0.96

3 15 0.009 0.63 10.9 2.1 1 23 345 368 345 368 0.91

4 15 0.0008 0.056 14.3 0.5 1 23 371 393 371 393 0.98

5 15 0.046 3.3 8.7 1.4 1 23 437 460 437 460 0.91

6 15 0.14 9.8 7.2 0.9 1 23 463 486 463 486 0.92

7 15 0.4 29 5.7 4.0 3 23 512 533 511 533 0.93

8 15 0.017 1.2 10.1 0.3 3 23 564 585 562 585 0.91

9 15 0.00054 0.038 14.8 1.7 3 23 627 648 626 648 0.96

10 15 0.012 0.82 10.6 2.9 1 23 654 677 654 677 0.96

11 15 0.14 9.9 7.2 1.9 1 23 807 830 807 830 0.90

12 15 0.11 7.6 7.5 0.1 3 23 907 928 905 928 0.91

13 15 0.025 1.8 9.5 0.2 2 23 935 957 934 957 0.92

14 15 0.0033 0.24 12.3 0.8 2 19 963 980 962 983 0.89

15 15 0.035 2.5 9.1 3.6 2 23 1016 1037 1015 1037 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0026	0.19	12.6	0.1	1	23	143	166	143	166	0.97
2	15	0.042	2.9	8.8	1.4	1	23	259	282	259	282	0.96
3	15	0.009	0.63	10.9	2.1	1	23	345	368	345	368	0.91
4	15	0.0008	0.056	14.3	0.5	1	23	371	393	371	393	0.98
5	15	0.046	3.3	8.7	1.4	1	23	437	460	437	460	0.91
6	15	0.14	9.8	7.2	0.9	1	23	463	486	463	486	0.92
7	15	0.4	29	5.7	4.0	3	23	512	533	511	533	0.93
8	15	0.017	1.2	10.1	0.3	3	23	564	585	562	585	0.91
9	15	0.00054	0.038	14.8	1.7	3	23	627	648	626	648	0.96
10	15	0.012	0.82	10.6	2.9	1	23	654	677	654	677	0.96
11	15	0.14	9.9	7.2	1.9	1	23	807	830	807	830	0.90
12	15	0.11	7.6	7.5	0.1	3	23	907	928	905	928	0.91
13	15	0.025	1.8	9.5	0.2	2	23	935	957	934	957	0.92
14	15	0.0033	0.24	12.3	0.8	2	19	963	980	962	983	0.89
15	15	0.035	2.5	9.1	3.6	2	23	1016	1037	1015	1037	0.96

Sequence Information

Coding Sequence: ATGTTACCAACAAGTGAACCACCCCAGCAAGTTCACGTGCCATCTACATCACCTGTCCCATCATCATCAAGGGTAGAAGATGACATTTCCAAACCAGAAACCACAGAAGACTCTGAACAGGTGTCTCCTCAAATGCCAAGATTAAAGCCACAAACCACTCCTGTAAGTATACCTATAGAGACTGTTACAAATATAGATGAGATCTCAACCAATAACGATAATTCTCCTTCAACAAgtagtattaataaaaatacaaaatgtgcctctaaaacaattgaaaaatcAAATCCCAATGtagataatatttcaaaatcaaataaatctAGTAATAGTACCATTACTTCAAAGAGTCCAGCTAAAGCTGACAATATTGATAGTAGTTCTGTCCGTCCTAAACTGTCACTTGGCAAAACTTTGGGAAGTGATTATAAATGTGAAGACTGTGGAGATGGATTTGGAAATAGAGGAAGCCTGGTAATACATAGAATAAGGAAACATAATTTTCAGACTGAGAGTATGAAAGCCAAAAGAGCTCAAAGCTCATCTGCTTCTCCAAAACGTAAAAACAAAAGATTGTCGGGGTGTCCCAAGTCTAGAACTACTAAATCAGCAAGTTTGTCCCCCATAAAAAAACCTGAACCTGCAGTAAAATCACCTGTCAAGTCATCCATTAGTCCTGACTCTAATGCTAAGAAACCCCCTGAAAATTCTTTAAATCAAGCAGCAAGCTCAATTAATCAGCAAAAGGAAGTTCTCTGGTATGAAAATGATTCTCACGAATGTGAGATTTGTTTCCGAGTATTAAGATCGTGGACCAAGTTTGTGGAACACAGCAAAACTTTACACGACTTCTATCCTaaacctcctcctcctcctgaGACGGCTCCTGAAGAAACTTCTGAGCCTGACAAAGATACTCCTTCTACACCTCAACAGAATGAAACAGAAACTATAGTAGAAAATATTCAATCTGAAGTCGTGAAATATCCAACAGGCAGTACTACTTCTTCTTCGCCATTATCTGAAAAGAAATTTGAGTGTCCTGTTTGTAAtcttaaattcaaaaaaaagaTTGGTTTGAATATTCACTGTCGTAATCAGCATGATAAGCATGTATGCTCAGAATGCAATGATTATTTTGATTCAAGAGATGATCTAGAAATTCATATGTTGACTCATGAATTGCAAGAACAATTAAACAATAGATTAAACACTAATGTTTCTGCTGATGCTGATCCTGAGAAAGTTGCAGTGCCATCAAAACCTCCTATTAAAGCAAGAGAGGATGAAACTGCATCTACCACAAAATTTGAATGTTTATATTGCGATTCTTCATATACACAAAAACCAAAACTATCATTACATTACACTGATAAACATAAGCTATATTTCTGTACTATTTGCTTCAATGGCTTTAAATCTGCCAAACTTTTAGACAACCATAAAAGTGAAGACCATATCAACAATAATGAACAATTTAATGATCCTATAAATATCTCATCTAAAGGTACTTCATCTACTGATAATGTGATATGTAAATGTTGTAAATTGGAGTTTAAATTCCGTAGTAGTTTGTTCTTACATATTCGTCAATCTCACAATATGATACCGTGTACATTATGCGTAAGTCCGATAAGTGAGGATCAATTTGGAAAACACAAATTAGATTGTTTAGATCCACGTTTATCATGTATAATGTGTAAGATATCTTTTAAACGAGAGCGCTCATTAGCTCTCCACATGGCAAGGGAACATGCACCTAAGAAAGTAGCAATCGTGATATCATCTGACGAAGATGATgagaaggaaaaagaaaaggaGAAGCAAAAAGCATCTAAAGAGAGTATTAGAGTAAAAAACACAAGTAAAACTCCATTCTGCATGAAATGCAAAAAGAAGTTTGACTCCAGTAGTCAGTTATGGGATcatcttaaaaatatacatcCAGCTGACCCTCGTTACAGGTGCTCCACCtgtcaaaatgttttttattcttCTGGAGGCTTGTCTAAGCACACAGCTAAATGCCAcaatagtaatagtaaaaaGAATGCACATGATAGTGACAGTGATGCAGATGAAGAAAAAGAATCTAATGACAACATAAAAAATGAAGAGATGGATGAGAggcaagaaaaagaagaagacgaagaggAAGATACAATGATCTGCCCTGTTTCATCTTGTAGAAAACGATTCAATACCACATGGCAGTGTGTCAATAGACATATAAAAGACATACACCATCCTAGTACTCTCAAAgaatgtatgtattgtattaaattatttgtagaTGTTGAAAAATGGAAAGAGCATGAAAAATTGCATGTTCTGATTCCTGatgaaattcaaaaaattgGTAACATACCATTGAAAAATGCATTCAAATTTGCTATCTCTGGTTTTGCTGAGCCTAAACATGTCTGCAAAGTTTGTACAAGTAAATTTTTCACTTTAACTCAGTTAAATGAGCATACTGCTGCCAAACATGAAAAAGAAAGTGAGAGAGATAGGGAGAGATCAATTACACCATCATCAGACCATAGTGTTCACCGATGGACTAAAAGTCGTTCCAAAACTACTACTTCATCAACTTCAAAGCGAATCATACAAAGTAGTTCTGATGATGACTCTGATTCTACAACATTCTCATCACGATCTGCAAAACGTAAGAAAACGGATCTGCTAACAAGCAAAGATATAAAACAGAAAATCAACTGTAAATATTGTCCTGAAGAATTTAACAACTTTGTTGAATTATTACCTCATATTGAATCTTACCATAGTTCAAGTGTATGCTTAAAATGTGAAAATTGTGATGAGATTTATTATGACTTTGGCAGTTTTAATAAACATACAGAAGAAGCACATCCaaaattgtcattaaaatgTACTTATTGTCATCGTACATTTACAAGAGCACAAAATAAAGTCAGCCATGAGTTGGTTTGCACTAAACGTCCTTTAGATTCAGCTTTGTCAGACGAAGAGAGTTCAGATTCAAATTCCAGCTCTGACTCCTCATCCTTATCTGAATCAGTAATACCATGCAAATTTTGTAGTGCCAGTTTCAAAACGCATATGTTGTTGTGTGACCATTTAAAagaacatgcaaaaaatagtagCATGTAA
Protein Sequence: MLPTSEPPQQVHVPSTSPVPSSSRVEDDISKPETTEDSEQVSPQMPRLKPQTTPVSIPIETVTNIDEISTNNDNSPSTSSINKNTKCASKTIEKSNPNVDNISKSNKSSNSTITSKSPAKADNIDSSSVRPKLSLGKTLGSDYKCEDCGDGFGNRGSLVIHRIRKHNFQTESMKAKRAQSSSASPKRKNKRLSGCPKSRTTKSASLSPIKKPEPAVKSPVKSSISPDSNAKKPPENSLNQAASSINQQKEVLWYENDSHECEICFRVLRSWTKFVEHSKTLHDFYPKPPPPPETAPEETSEPDKDTPSTPQQNETETIVENIQSEVVKYPTGSTTSSSPLSEKKFECPVCNLKFKKKIGLNIHCRNQHDKHVCSECNDYFDSRDDLEIHMLTHELQEQLNNRLNTNVSADADPEKVAVPSKPPIKAREDETASTTKFECLYCDSSYTQKPKLSLHYTDKHKLYFCTICFNGFKSAKLLDNHKSEDHINNNEQFNDPINISSKGTSSTDNVICKCCKLEFKFRSSLFLHIRQSHNMIPCTLCVSPISEDQFGKHKLDCLDPRLSCIMCKISFKRERSLALHMAREHAPKKVAIVISSDEDDEKEKEKEKQKASKESIRVKNTSKTPFCMKCKKKFDSSSQLWDHLKNIHPADPRYRCSTCQNVFYSSGGLSKHTAKCHNSNSKKNAHDSDSDADEEKESNDNIKNEEMDERQEKEEDEEEDTMICPVSSCRKRFNTTWQCVNRHIKDIHHPSTLKECMYCIKLFVDVEKWKEHEKLHVLIPDEIQKIGNIPLKNAFKFAISGFAEPKHVCKVCTSKFFTLTQLNEHTAAKHEKESERDRERSITPSSDHSVHRWTKSRSKTTTSSTSKRIIQSSSDDDSDSTTFSSRSAKRKKTDLLTSKDIKQKINCKYCPEEFNNFVELLPHIESYHSSSVCLKCENCDEIYYDFGSFNKHTEEAHPKLSLKCTYCHRTFTRAQNKVSHELVCTKRPLDSALSDEESSDSNSSSDSSSLSESVIPCKFCSASFKTHMLLCDHLKEHAKNSSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -