Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439137.1:17051104-17055735[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.031 2.2 9.2 0.9 1 23 486 509 486 509 0.92

2 14 0.007 0.49 11.3 0.5 1 23 513 534 513 534 0.97

3 14 3.5 2.4e+02 2.8 0.5 2 23 613 634 612 634 0.94

4 14 0.02 1.4 9.8 2.4 2 23 640 661 639 661 0.96

5 14 0.00082 0.058 14.2 0.0 2 23 671 693 670 693 0.96

6 14 0.13 9.5 7.2 0.1 1 23 697 719 697 719 0.92

7 14 7.2e-05 0.0051 17.5 2.2 1 23 725 748 725 748 0.98

8 14 0.00078 0.055 14.3 2.4 3 23 756 777 755 777 0.93

9 14 0.00052 0.036 14.8 0.7 1 23 782 804 782 804 0.97

10 14 0.0031 0.22 12.4 5.6 1 23 810 833 810 833 0.97

11 14 0.0004 0.028 15.2 3.6 1 23 841 863 841 863 0.98

12 14 0.62 43 5.2 3.5 2 23 870 892 869 892 0.97

13 14 0.0003 0.021 15.6 2.6 1 23 897 919 897 919 0.97

14 14 6.8 4.8e+02 1.9 0.6 1 17 925 941 925 948 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.031	2.2	9.2	0.9	1	23	486	509	486	509	0.92
2	14	0.007	0.49	11.3	0.5	1	23	513	534	513	534	0.97
3	14	3.5	2.4e+02	2.8	0.5	2	23	613	634	612	634	0.94
4	14	0.02	1.4	9.8	2.4	2	23	640	661	639	661	0.96
5	14	0.00082	0.058	14.2	0.0	2	23	671	693	670	693	0.96
6	14	0.13	9.5	7.2	0.1	1	23	697	719	697	719	0.92
7	14	7.2e-05	0.0051	17.5	2.2	1	23	725	748	725	748	0.98
8	14	0.00078	0.055	14.3	2.4	3	23	756	777	755	777	0.93
9	14	0.00052	0.036	14.8	0.7	1	23	782	804	782	804	0.97
10	14	0.0031	0.22	12.4	5.6	1	23	810	833	810	833	0.97
11	14	0.0004	0.028	15.2	3.6	1	23	841	863	841	863	0.98
12	14	0.62	43	5.2	3.5	2	23	870	892	869	892	0.97
13	14	0.0003	0.021	15.6	2.6	1	23	897	919	897	919	0.97
14	14	6.8	4.8e+02	1.9	0.6	1	17	925	941	925	948	0.69

Sequence Information

Coding Sequence: ATGGATGCTGAGTCAACGTCTGAGTGCTTCCTATGCAGAAAGTGGACGTCAACGTTGTACGACGTGGAGAGCTGTGAGGTACCGTGCTCTGAACTGACATATGCACAATGTATGACACAGCTGAGTGGTAGAGACATCAGTCTGGACTGCTGTGCTTACACGCAAGATACACCTCAGATCTGTGACGACTGCTGTTGCATGTTTGATCAACGTGACACGTTGCAGCAAGATCTCAAGTCTCTGGAAGACAAGTTGAATTGTTTGTTGACCTCACGTCTACGTGACCTTGGTGCAGCCTTGACCACCTTAGTGTCCTTACCTGACCTAGAGGACGTGTTAGTACAGCCTCACTTGGTTACGATCAAAGATGAAATGTACAGCGACGTTGAAGAAGAGAACGTGGTCGTCACGGCAGCGTCAAACACCACACAGGCTAGCACGACAAAGCGTCACTCCAGGCGTACAGCAACCAAATCAAAAGCCAAACGTCCGAGAAAAACGAAGAGAAATGAAGCTGAAATTTCCCTAGAATACAAAATcccaaataaaaaacaaaagagaaatTCTAGAAAATCCACAAGTAAAAATATTCCAATTAATtctagagttaaaattttaaccccagaagttattaataataacacagCTCGTGTTGTAAGCAGCCCTAATAAGTCAAAGTCAACCCCTAGCATGGTTCCTGAAGTAAACCCTAATGCAGGCACGTCAAGTTCTACTTTTACATTTGGCAAATGTTTGGTTAAAAATGTTGTCACAAATCAGGTGCCTGCTGGGTCTCTAACTCCTGTTACTGTGACGGCAGTTAGCTCTGCTAATTGTGAGCCTCAGTTAATTACAAGACCTGGTCATGTGGTAGACTCTGCTACCGTTAAgaaaataattgcaattaaaCCTAATTATAATAGCCAATCTGCACAGCCTAAAGTTGCCATTCCACGATTAACTCCACATAAAACAGGGACCAGGTCTAACAAATCAGGGGCTAAATCTGAAATAATGGGTACTCGTACCCCAGTACCTGTTCCTGAAGTTATAGGGACTGTTTGTGAAAAATTAGGGTCAAATAGTCAGATAGTAGGGACTCATTctgaaaataatgatgaaatagGGCTGAATTCTGAAATTGAGTCCAATGATGTAAAAGGGCTCAATTCTGAAATAGGGATTTGTTCTGAAACAGGGTCCAACGATAAAAAAGGACTTCGTTCTGAAATAGGGCCTACGTCTAAAAAGGAGTATAAATCAAAACTAGAGTGTGCTAAAGAAACAGTAAGAGCTGGTGCTGAAATAGGATCCAGTGCTGAAACAATAGGGCCAGATGAGAGAGACAAAACAGTGCAGTGTAAAGCAGCCCCGCCAGTGTATCAGTTCAAGCAATGTAAGCTAGTCACCACCAAtctcaaatatttgaaaacCACGCACAAATGTTCTAAGAAATACACATGCCCTACTTGCAAATATGTAGCAGACAATAGTAGAAAACTAAAACAACACAACGACAAGGAACATCCAGTGACTTATGATTGCCCAAAGTGTGACGGCAGCTTCGTTAGTAAAGAATTCACAGAACACTTGAAAACTCACTCTAATGCTAACTTAAAGTCCATATTGCCAAAACCAGAGTATTCTCCTATAGGGTCTGTTGTACTACTGCCAAAAACTAGTGAAAATACTGGTACACGTAACGAAGAagcaaataattcaaatattaaaattacagcaGTTATGTCTAAAAATTTGCTGATTAATGATTGTAACAAGTTTGAGATTGATAAGATTTACAGTTGGCACAGTGTAGCTTTATCTAACGGCAGAATTAAGTGTGATTTATGTAAGGTGGTTCAACGAAACAAACTTGACTTCGAGAAACATTTCCTGATACATCTGCATGAGTCGTTGCCGTGCAAGTATTGCAAGATCACGCTGGTCAACTTCAAGCATTATTTGAAACATATGCTGTATCATGAAATGAAGGCCAGTAGACGAAAGTTGAGTTGTAATGAATGTGGAGAACGAGTAGCGAAGTTAGTTGGTCTGCAGTCGCACATGAGGAGTGCTCATGACTTGAGGTTTGAGTGCCAGGAGTGTAACGAGCAGTTCCTGACCTCGGAGCTGTTGAGTGAGCACGAGGAAGCTCACGTCAGGAGCTCGTACTTTCAGTGTGACTACTGTCACATCTCCTTTGCAGGCAGAAGTCTGCTTCACGCACATCTCAAGTCTGAGCACGTCAAGAACGAAGGAAACATGTGTACGACCTGTGGCAAACAATTCTTCAAGAAATCAAGCCTGAAAACACACGAAACTAGAGTGCATTCAAATAAATCTCATAACTGTCAAGTATGcggcaaaattttaaaaacagatCAGTCGTTATTGGCTCATATGAAAATACATACTAACAAATATCCATTTCGTTGTGGCCACTGCGACAAGGGGTGTCACAGTAAGAAGTCGTTGCAGGAGCATATCAATAACGCTCACATCATTGATAAGATTAACTTCTATACGTGCCAAGTGTGTGATAGGAAGTTCCGTCATTATGGTTCATATAACACTCATGTAAAGTGGCATAATGACCCTTACCCAGGCAAATGTAGCTTGTGTAGCTATAAGTGCAGATATAAGCATCTGGTCGACATTCACGTCAGGACGGTGCATACTAAAGAAACATATGACTGTACGTTGTGTGATAAAAAGTACTTCGCTAAGTACTTGTTGAAGCGACACATGTCCAAGCATACCGGCAAGTACATGTACAACTGCGACTACTGTGACAGAGGCTGGAACATCAAGGCACATTGGAGGCTACATAACTATAATTTACATGACATAGCCTTGCCTGGCAAGACAGTTAAGACTAATCGAGATTTTAAACTTGTTTTACCTGAGTTACCTGCAATAATCAAGATGAGGAAGAATGAGACTGGAGACTAA
Protein Sequence: MDAESTSECFLCRKWTSTLYDVESCEVPCSELTYAQCMTQLSGRDISLDCCAYTQDTPQICDDCCCMFDQRDTLQQDLKSLEDKLNCLLTSRLRDLGAALTTLVSLPDLEDVLVQPHLVTIKDEMYSDVEEENVVVTAASNTTQASTTKRHSRRTATKSKAKRPRKTKRNEAEISLEYKIPNKKQKRNSRKSTSKNIPINSRVKILTPEVINNNTARVVSSPNKSKSTPSMVPEVNPNAGTSSSTFTFGKCLVKNVVTNQVPAGSLTPVTVTAVSSANCEPQLITRPGHVVDSATVKKIIAIKPNYNSQSAQPKVAIPRLTPHKTGTRSNKSGAKSEIMGTRTPVPVPEVIGTVCEKLGSNSQIVGTHSENNDEIGLNSEIESNDVKGLNSEIGICSETGSNDKKGLRSEIGPTSKKEYKSKLECAKETVRAGAEIGSSAETIGPDERDKTVQCKAAPPVYQFKQCKLVTTNLKYLKTTHKCSKKYTCPTCKYVADNSRKLKQHNDKEHPVTYDCPKCDGSFVSKEFTEHLKTHSNANLKSILPKPEYSPIGSVVLLPKTSENTGTRNEEANNSNIKITAVMSKNLLINDCNKFEIDKIYSWHSVALSNGRIKCDLCKVVQRNKLDFEKHFLIHLHESLPCKYCKITLVNFKHYLKHMLYHEMKASRRKLSCNECGERVAKLVGLQSHMRSAHDLRFECQECNEQFLTSELLSEHEEAHVRSSYFQCDYCHISFAGRSLLHAHLKSEHVKNEGNMCTTCGKQFFKKSSLKTHETRVHSNKSHNCQVCGKILKTDQSLLAHMKIHTNKYPFRCGHCDKGCHSKKSLQEHINNAHIIDKINFYTCQVCDRKFRHYGSYNTHVKWHNDPYPGKCSLCSYKCRYKHLVDIHVRTVHTKETYDCTLCDKKYFAKYLLKRHMSKHTGKYMYNCDYCDRGWNIKAHWRLHNYNLHDIALPGKTVKTNRDFKLVLPELPAIIKMRKNETGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -