Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439128.1:7525368-7526978[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.7e-05 0.0047 17.6 0.5 1 22 239 260 239 263 0.91

2 10 5.9e-05 0.0042 17.8 4.1 2 23 281 302 280 302 0.97

3 10 0.0028 0.2 12.5 2.7 1 23 308 330 308 330 0.98

4 10 0.00022 0.015 16.0 3.5 1 23 336 359 336 359 0.96

5 10 5.4e-05 0.0038 17.9 1.4 1 23 365 388 365 388 0.97

6 10 6.3e-06 0.00044 20.9 3.7 1 23 396 418 396 418 0.98

7 10 0.00055 0.039 14.8 4.1 1 23 427 449 427 449 0.98

8 10 0.00014 0.0098 16.6 0.7 1 23 455 477 455 477 0.97

9 10 1.2e-06 8.5e-05 23.1 0.8 1 23 483 505 483 505 0.98

10 10 2.8e-05 0.0019 18.9 1.4 1 23 511 533 511 533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.7e-05	0.0047	17.6	0.5	1	22	239	260	239	263	0.91
2	10	5.9e-05	0.0042	17.8	4.1	2	23	281	302	280	302	0.97
3	10	0.0028	0.2	12.5	2.7	1	23	308	330	308	330	0.98
4	10	0.00022	0.015	16.0	3.5	1	23	336	359	336	359	0.96
5	10	5.4e-05	0.0038	17.9	1.4	1	23	365	388	365	388	0.97
6	10	6.3e-06	0.00044	20.9	3.7	1	23	396	418	396	418	0.98
7	10	0.00055	0.039	14.8	4.1	1	23	427	449	427	449	0.98
8	10	0.00014	0.0098	16.6	0.7	1	23	455	477	455	477	0.97
9	10	1.2e-06	8.5e-05	23.1	0.8	1	23	483	505	483	505	0.98
10	10	2.8e-05	0.0019	18.9	1.4	1	23	511	533	511	533	0.98

Sequence Information

Coding Sequence: ATGGAGAGCTTGGTAAAACTAGAGGATATGTGCAGAATCTGTGGAACCGCCACCTCGGGCTTGGTGCGACATGCCATATTTGAAGCCGAGAACCCTGAGCAGTGCTTGTCATCAAAGATTTCCTCATGTCTTCCTATCATTGTCAGCAAAGATGATGCACTGCCCAAGTTTGTGTGTGGTGAGTGTGAGTATAAAGTTACCTTACTTCATGACATACGAGCCGTCAGTTTGAAAACAGACGAGTTATTGAaggcaattttaaataaagagcaGGCAGTTAAAAGTGAAGAACCTCCAGTTTTCACACCAGTTTTTGTAATTGGACGGCCAGAAGTTAATAATTTAGACATCCAGGAGCAGGAAGAGAAGACTGAGCATTTACAAAGTTTTGAGCACATCATGCTAAGAAAACATTCATCCTCACTTACTGTTAAAGTAGTAATTCCTAGTAAAGTTTCATcagataatgtcattacaaatGAAAGTTCTATTGAAATTGAAAGTAGGAAAAGACCAATCAGAGCTGTTAGATTAAACCCAGAAATCTCATATGGATCTGAATCAATATTAGGGAATCTCTTAAAGAAAAGTCctccaattaaaaaagtaaaaagcaaATCCAAGAAATCAACTCtgaaacaatgtaaatattgcaaattgttGATGCCCTCTCGTGAATACCAGAGCCATCTGACAGACGAACATAAGAAACAGTTTGAATGTCATTTGTGTAAGAACAGGTTTTCAAACTCTGAAGAACTGGAGGAACATATGGAAGTGATAGATCACTCAGAACCTATACATAATGTTGAGGCAGAATTAAAAGGTGTCCGAGTATTGAAATGTAACATGTGTCAGAAAACTTACATGAGAAAACATTTGCTTGTCTTACACATGAGAAAACACACCGGGGAGAGACCCTTCCCCTGCAACCTGTGTGAGAGAAAGTATGCATGCAAAAGTTCGCTGAACTCTCATATGCTCAAACATAAGGAAGAGTGGAAGCACATCTGTAATTTTTGTGGTAAGGGCTTTGTTGATAAACATAGTTTTATCTACCATGTTCGTAGCAATCACACTGGAGAAAGACCATTTGCTTGTGAGAAATGTGAGAGGaagttcattaaaaaacaagatTTACTCAAACATTTACAAACACAACATAGTGAAGCACCTAAGGAAGCATTCTCATGTGAGAAATGTGGTAAAGTCTGTAAAGATTATGACTCCCTAAGAAGTCATCGTAGAAGTCATATCCCTGTAGAGGAACGTAGGGTTCACAAATGTACATTGTGTGAAGCTTCGTTCACAGGTAAAACTGGGCTAATGAAACACATGCATCGACATACGGGAGAAATGCCATACGAATGCGAACAATGTTCAAAGAGATTCTTCACTAAGAAAGGGCTGGAGCTACATTTAGTGATACATTCAGGTgtgaaaagttttatttgtgaGTATTGTGGCCGTGCTTTCTCACAAGACAATACTTTGAAGGTCCACAGACGTACACACACAGGGGAACGCCCATATGAGTGCAATATCTGTATGAAGAGATTTACACAGAGCTCAGCTCTCAATTCACATAAGAAATTACATCTCAAAGACTAA
Protein Sequence: MESLVKLEDMCRICGTATSGLVRHAIFEAENPEQCLSSKISSCLPIIVSKDDALPKFVCGECEYKVTLLHDIRAVSLKTDELLKAILNKEQAVKSEEPPVFTPVFVIGRPEVNNLDIQEQEEKTEHLQSFEHIMLRKHSSSLTVKVVIPSKVSSDNVITNESSIEIESRKRPIRAVRLNPEISYGSESILGNLLKKSPPIKKVKSKSKKSTLKQCKYCKLLMPSREYQSHLTDEHKKQFECHLCKNRFSNSEELEEHMEVIDHSEPIHNVEAELKGVRVLKCNMCQKTYMRKHLLVLHMRKHTGERPFPCNLCERKYACKSSLNSHMLKHKEEWKHICNFCGKGFVDKHSFIYHVRSNHTGERPFACEKCERKFIKKQDLLKHLQTQHSEAPKEAFSCEKCGKVCKDYDSLRSHRRSHIPVEERRVHKCTLCEASFTGKTGLMKHMHRHTGEMPYECEQCSKRFFTKKGLELHLVIHSGVKSFICEYCGRAFSQDNTLKVHRRTHTGERPYECNICMKRFTQSSALNSHKKLHLKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -