Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439128.1:11079977-11089081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0013 0.092 13.6 3.8 1 23 337 359 337 359 0.96

2 10 7e-05 0.0049 17.6 6.1 3 23 367 387 365 387 0.97

3 10 8.1e-05 0.0057 17.4 7.0 1 23 393 415 393 415 0.99

4 10 3.6e-05 0.0026 18.5 2.0 1 23 421 443 421 443 0.97

5 10 2.5e-05 0.0017 19.0 3.0 1 23 449 471 449 471 0.97

6 10 1.1e-05 0.00076 20.1 0.2 1 23 477 499 477 499 0.98

7 10 0.00018 0.013 16.3 0.7 1 23 504 526 504 526 0.97

8 10 0.00013 0.0092 16.7 2.5 1 23 532 554 532 554 0.98

9 10 0.0019 0.13 13.1 5.3 1 23 557 579 557 579 0.98

10 10 9.5e-06 0.00067 20.3 0.8 1 23 602 625 602 625 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0013	0.092	13.6	3.8	1	23	337	359	337	359	0.96
2	10	7e-05	0.0049	17.6	6.1	3	23	367	387	365	387	0.97
3	10	8.1e-05	0.0057	17.4	7.0	1	23	393	415	393	415	0.99
4	10	3.6e-05	0.0026	18.5	2.0	1	23	421	443	421	443	0.97
5	10	2.5e-05	0.0017	19.0	3.0	1	23	449	471	449	471	0.97
6	10	1.1e-05	0.00076	20.1	0.2	1	23	477	499	477	499	0.98
7	10	0.00018	0.013	16.3	0.7	1	23	504	526	504	526	0.97
8	10	0.00013	0.0092	16.7	2.5	1	23	532	554	532	554	0.98
9	10	0.0019	0.13	13.1	5.3	1	23	557	579	557	579	0.98
10	10	9.5e-06	0.00067	20.3	0.8	1	23	602	625	602	625	0.98

Sequence Information

Coding Sequence: ATGAGCTCATTGACACCTCAAGATTCATGGCTAGCAGAAAGTTCGTCTGTTGATGACATTGGCGTTGTAGAGCTCTTCTTAAAGTCATTAGATCCATCAGGTACAAGTGTAGGAGATTACTGTTGGACAGGTCCTTTGGCTGATACTACGTCAACCGACGCTAATTTCGTACCTCCATCGCGTGGAAAATTCGGTTACGAGCCCTTCAGTTTATCTACATTACGTACTGTAGAAATTAAACAAGAACCTTTAGAAGTGTCGTGTTTTATCGACCAGTCTTCAGAAAAACTCAATAGTAATACATTTCTGAGCTCCTTGCCGTCTGTGCAAAATTTTCCAGATTTTAGATATTCATCTCAGTGTGAAGGGTTTAGTGAGCAACCCACTGTTGATTTGGAATTGAACTGTGAAAACTGGCTCTCTGCACCCAGTAGTTGCTTATCTAACTTTGATTCCCTTAAGGTGGTCCCAGAGCTTTTAGTGGAGAGAATTATTGCTGAAGATAACAGCCATAACAACAGTGGGAATCTTTCATTGCAACCTTCTATTCACCAGTTCAAGCTTGAACAGGTACCATCTTCATATCTTTGCAACAATAACAGCTGCAAGATTGAGGCTTCGTCAGTACCCCAATGCAGCCAGCAGCTGCCCAAGCACTTCTACCCAGATACTCAATTATCCAGAAATTTGGCCCAAACTATATCTCAGCAAGGCCTGGGCCTTGGTAATGTTGTGGTAAAACAAGAGCCATCAGAAGACAACATGAGTTTAAACGGACATTTTATGTGCCACACAATGTTCATGATGAATAATTCTGCATCTAAATGTGGTTGTGATTTGTCAAAGACAAGTCATGGTAACCATTTCCTGTGTGCAAACAACAAACCAGCTATGTCAGTGGAGCATTATGAAGAACTCCTAAAGCGAGGAAGTGCAGCATTACTAGGTGAGCCTCAATCAAAAATGTATCCACCTCACCAGAGTATTCGTTCTGATAAAGAAAGACCATTCACTTGTGATGAATGTGGCAAATCTTTCTTACTAAAGCATCACCTTGTGACACATTCAAGAGTGCATACTGGAGTTCGACCTTATGGGTGTAATGACTGTGGCAAAACCTTTGCACATAAACATTGCTTAGTTACACATCAACGTCTCCACTCTGGCTTGCGACCATTTCAATGTTTAGaatgtaaaaaatcatttacacTTAAACATCATCTTGTTACTCATACAAGAACACATTCAAAAGAACGTCCATTTCATTGTGAGGAATGTGGAAGTACTTTTTCtcaaaaacgtaatttaataacTCATGCAAAGTTACATTCAGGTGAAAGGCCTTTCCAGTGTGCTGTATGTGGAGAATGTTTTTCTCAACGTGAACACCTGTTGGCGCATTCCAGATTTCATGGTGGGGAAAGTGCATTTGTTTGTGTAGATTGTGGAGAAGCATTTGCAAGGAAATTTCAATTAGTAGATCATAGAAGGCAACATGGACATTCCCCCTTTTCATGTACTATATGTGGTAaagaatttttacaaaaaagaaCTTTGATTGCCCATACCAAACTTCATGACGGTAGTAGACCATATACTTGCAAGCACTGTAGTCAAACTTTCCCAAGGATGAGTGACTTGGTGTCTCATTCTAAAATCCACACTAATTTTACTTGCAAGGATTGTAATTGTAGTTTTCCAACTCACGAAGGCTTAATATTGCATTTACAACATCATGGACAAGTTGGTCCTATTGGAAATCCAAGAGGCCCTTCTGTCCCAAATAATCCTCCGTCCAAGCCGTATACATGCCCAGAATGTGGCACTGGCTTTGCTCAGAAACATGGCATGGTACAACATATGAACAGAAAACATTCTAATAATATCACTACAGCCCATGCAAATTCAAGTAgacaaaataatgatgataaaactAACATGGTTATTAATCCGAATGACAACAAAAATGCAATGATGTTAGCTCAAAATTGTGACATCATGGAACAAATTAAACATCAAGTGTTAACTGAACAGATTAAAGctaaaattctataa
Protein Sequence: MSSLTPQDSWLAESSSVDDIGVVELFLKSLDPSGTSVGDYCWTGPLADTTSTDANFVPPSRGKFGYEPFSLSTLRTVEIKQEPLEVSCFIDQSSEKLNSNTFLSSLPSVQNFPDFRYSSQCEGFSEQPTVDLELNCENWLSAPSSCLSNFDSLKVVPELLVERIIAEDNSHNNSGNLSLQPSIHQFKLEQVPSSYLCNNNSCKIEASSVPQCSQQLPKHFYPDTQLSRNLAQTISQQGLGLGNVVVKQEPSEDNMSLNGHFMCHTMFMMNNSASKCGCDLSKTSHGNHFLCANNKPAMSVEHYEELLKRGSAALLGEPQSKMYPPHQSIRSDKERPFTCDECGKSFLLKHHLVTHSRVHTGVRPYGCNDCGKTFAHKHCLVTHQRLHSGLRPFQCLECKKSFTLKHHLVTHTRTHSKERPFHCEECGSTFSQKRNLITHAKLHSGERPFQCAVCGECFSQREHLLAHSRFHGGESAFVCVDCGEAFARKFQLVDHRRQHGHSPFSCTICGKEFLQKRTLIAHTKLHDGSRPYTCKHCSQTFPRMSDLVSHSKIHTNFTCKDCNCSFPTHEGLILHLQHHGQVGPIGNPRGPSVPNNPPSKPYTCPECGTGFAQKHGMVQHMNRKHSNNITTAHANSSRQNNDDKTNMVINPNDNKNAMMLAQNCDIMEQIKHQVLTEQIKAKIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -