Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: RREB1
Assembly: GCA_949318235.1
Location: OX439130.1:36841218-36848609[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0005 0.035 14.9 0.0 2 23 149 170 148 170 0.96

2 17 1.1e-05 0.00076 20.1 0.3 1 23 192 214 192 214 0.98

3 17 1.1e-05 0.00079 20.1 2.9 1 23 220 242 220 242 0.99

4 17 0.084 5.9 7.9 0.7 2 23 313 335 312 335 0.90

5 17 0.052 3.7 8.5 0.6 1 23 393 416 393 416 0.88

6 17 0.031 2.2 9.3 0.1 1 23 529 551 529 551 0.97

7 17 0.0012 0.081 13.7 0.9 1 23 558 580 558 580 0.99

8 17 0.017 1.2 10.1 5.7 1 23 586 609 586 609 0.97

9 17 0.026 1.8 9.5 0.2 1 23 635 658 635 658 0.92

10 17 0.0029 0.2 12.5 2.0 1 23 911 934 911 934 0.95

11 17 6.6e-05 0.0046 17.7 1.4 2 23 1126 1147 1125 1147 0.97

12 17 0.22 16 6.6 5.4 1 23 1153 1176 1153 1176 0.96

13 17 0.038 2.6 9.0 1.8 1 23 1215 1239 1215 1239 0.95

14 17 0.0011 0.074 13.9 0.6 2 23 1299 1320 1298 1320 0.96

15 17 0.079 5.6 8.0 0.9 1 23 1325 1348 1325 1348 0.98

16 17 0.018 1.3 10.0 0.5 3 23 1406 1426 1404 1426 0.93

17 17 0.003 0.21 12.5 5.0 1 23 1432 1454 1432 1454 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0005	0.035	14.9	0.0	2	23	149	170	148	170	0.96
2	17	1.1e-05	0.00076	20.1	0.3	1	23	192	214	192	214	0.98
3	17	1.1e-05	0.00079	20.1	2.9	1	23	220	242	220	242	0.99
4	17	0.084	5.9	7.9	0.7	2	23	313	335	312	335	0.90
5	17	0.052	3.7	8.5	0.6	1	23	393	416	393	416	0.88
6	17	0.031	2.2	9.3	0.1	1	23	529	551	529	551	0.97
7	17	0.0012	0.081	13.7	0.9	1	23	558	580	558	580	0.99
8	17	0.017	1.2	10.1	5.7	1	23	586	609	586	609	0.97
9	17	0.026	1.8	9.5	0.2	1	23	635	658	635	658	0.92
10	17	0.0029	0.2	12.5	2.0	1	23	911	934	911	934	0.95
11	17	6.6e-05	0.0046	17.7	1.4	2	23	1126	1147	1125	1147	0.97
12	17	0.22	16	6.6	5.4	1	23	1153	1176	1153	1176	0.96
13	17	0.038	2.6	9.0	1.8	1	23	1215	1239	1215	1239	0.95
14	17	0.0011	0.074	13.9	0.6	2	23	1299	1320	1298	1320	0.96
15	17	0.079	5.6	8.0	0.9	1	23	1325	1348	1325	1348	0.98
16	17	0.018	1.3	10.0	0.5	3	23	1406	1426	1404	1426	0.93
17	17	0.003	0.21	12.5	5.0	1	23	1432	1454	1432	1454	0.98

Sequence Information

Coding Sequence: ATGCTGTGGTTTCGCGACGACGTCAAAGATGCGCGAGTTAAGTCTTTGACCTTCATCCCATGCAGCAGTACAGCAGCCGCCGCCACACACACTCATGGTACAGATTCCTCAGTAGTTGAAAGCTGCGAGGAAAACAACGTACAAGATTGCAGTCCTGCAACGACTTCAAGTGCGGGCACTTCGAGTGCTCCCTTGGCGGCAAGTGCACCGTCATCTCCAGTCACCTCGCCACCCCAAGAGTCGCCACCCCCACCTAGCAGCTCCGACAGTGACCACCAACCCGCGGAATCTAGTGCTCCTACCACAGAGAGTGATCTGCCCACAAATCTAACCGGAGCAAGGAAGCGGAAAGCGCATCGCGTCGTGAAACGAGAGACATCAAGCGAGGGTGGCAGCCAAGTAGGTGAGCCAGAGCGTGGCAGCTCGAGTACCGAGGAGACGTTGACGTGTCCTGTTTGTGAGGCGGTGCTCACCTCTCAGTCAGAGTTCACAGCTCACATTCGAGGTCACAACGTTGAGCCCTCCAGCAGCCTCGCTACCCCGCCGggcaataacaacaacaataacaaggtGTTCAGCTGCAGTTTATGTGGCAAGATGTTGAGCTCATCGAGTTCTCTCGACCGCCACATGTTGGTACACTCTGGAGAACGTCCCTTCAAGTGTCGTATCTGCAGCGTGGCATTCACCACTAACGGCAACATGCATCGTCACATGCGTACGCACAACAACAACACGAGCAGTGTCAACAACAACCACGCTCACCACTTAGTGGACAGTGATGGCAGCTCGGACGGTGCTTCTGAGAAGAATGTGAGCAGAAAGCGTCGTTCTAATGGGGATCTCAATGTACCTTCTCCTAAGAAACGTACCGAGGAAGGTCACGTGTCACCACCAGTCGCTGCTGTACCTCCGGACTCGTGTCTCTCCTGTCAAAGATGCGACAAGTGTTTCATGACGTTCAACTCCGAACGTGAACTCAGTTTGCATCGTTATGCAGCACATGCTCCACACGATGATGAACCAATAATTGAAGAACCTAAAGTATCATCTGGTCCAGCCCAAGTTGGCTTTAAAGATCtcaattttgttgatttttcaaCAGATAAATTTCCACTGATTGCTCGTGCTTTTTGTGAACGCTCAGTACATAAGGCGAGTTCAGTAATTCATAGATTTCAATGTGAGGAGTGTGGACGTGCATTTCCGTGTGGCAGTGCACTTCATATTCACGTAACTTCTGCTCATGCCGAGACTTCACCACGTGACCTTAGCTGTCCACGTCGTAAGCTACATTATGAGGAACAAAAAGAGGATTTCTTCGCTGGATTAGACTTGCAGACCAAGAGTCCGTCCTCCTCCCCTCCTCCCACCACCACACCTACTCCGATCAAAGTACGTGCCTTCAGCGAGCTGGCCATCCCTCGTCGTGAGGAAGACCAACCTGAAGATACGGAACAGCCACAAGATCTTGCAGACATTCCCAGTATTCTCTCAGTTGCAAACCGAGGCGCATTAGATCTCGCCAAATCACCAAATTCCTCAGCAGACGAGggtttgcgtcaaatgaaactCCGTGGTGAGTTCCCCTGCCGCCTCTGCACTGCAGTTTTCCCCAATCTGCGTGCCCTGAAGGGTCACAATCGCGTGCATCTTAGTACTGGACCTCCTTACTACTGCAACATGTGTGTGTATAACAGCAATGATAAGGCAACTCTAGTGCGTCACTTGCGAACTCACAACGGAGAACGTCCTTTTGAGTGCCGTCTTTGTCACTATGCTTTCACCACCAAGGCAAACTGTGAGCGTCACTTGAGAAATCGTCACAACAAGACGTCACGTGACGACGTACGTCGTTCAATCACATGTCATATGGGAGAAGATGCATCCTCGGAGAAACCCCATGAGTGCGCAATATGTGAGCGTTCATTTCCATCGCGTTCAACCGCTCTCAGTCACGCGGCTCGGGAGCACCCCACGTCAACAGCGACTGAGTTGGTACGACTCGGTGCTGACCCTGAGGAAATTGAGGACGAAGCTGAGTTGCTGATGTCACCTGGCAATTCTCCAAGACCTCAAGAACGCAGTTCAAGCCCCAGCAGTGAGGAGGAACCACGCAGAGGGGCACCATCTCCGCTGGACCTCAGCATGGACGCGCTAGATTTGAGCAAGAAGCCGTCTGCCCCTCAACCTGTAGCTCCTGTGGCTAATACTCCTCCACAAGAGGCCCCACAAGATCTGACGAAACCAAAAGAATCCCACGCTCCAGTGCTACCCCCTCATCACATACCTCATCTGCCGCATTTCTTGGCTCACCACCCTGGTTTACCTACACCCCCACCACCCAGTGCATTTTTCCCTAACCCTCTGAGTATGTACCTTGGTTCTCCATTCCAGAGACCTTCTTTCCCATTCTATATGCCCTTGTTCGGCAACAGTCCTTCACCTGCAGCTACTCCACCACCTCCTCCTCCAGCAGCTCCCACCTCTTCAGCTCTAGATGAGGTCAAAGAGCAGCTACAGAAAGAATTAATTCGTGGACTTCAACTCACATCAGGAGGCTCACTAGTGATGGATGCACTACGCAAACCTGCTCCCGAGCCACCTCGAGCATCTCCACCACCAAAACCAACCCCTGAACCTCGTCCTGATCCTCCAGTCAAGATGGTAATTAAGAATGGAGTGCTGATGCCAAAGCAGAAACAACGCCGTTATCGTACTGAGCGTCCCTTTGCTTGTGAACATTGCTCTGCTCGGTTCACGCTGCGTAGTAACATGGAGCGTCACGTGAAGCAGCAGCACCCGCAGTTCTGGAGCCAGAGACCTCGAGGTGGACGACGCTCCGCACCCGCGAGACCTCCACCTTCTCCTTTACCAACACCGCAGCCTGAGATCACGCTGCTCGGAGAATCCAGAATCTCAGATGAGgTGAAGCACGCGCTTACACAACAACTGAAGCAGAAATTGACCAGCGATGACGGCAGTTCCGCTGCTCGTCGCCAGGAAGCAGAGGACGCAGCAGTCGAGGGCGACGTAGACGAGGAGGACGAGCCCGAACTTGTTATTGACGAGGCTCCACCACGTCGCTCTCCACGTGACGGAGACGCGGACCTCGCCAGTGTATCACGCTTGCTGGTGAACGCCTCCGCGCAGAACTTTCAGCACTACTTCCCCGGTCACGAGGAAGATGATGAAGAGGAAGAAGGTTTCATGGAAGGAGATGACGAAGATGAAGGGGTGCTGGATGACGGAAGCAGCAGTGAAGGTGGTCCTCTAACTAGTGGAGACGAAGGACGTGGCTCACGAGCAGGCGCACCACTAAGTCCTGGAAGAGTAAAGAAGAAGAGCGCTTACTCCAGCGCACCAAATCGTGTGACTTGCCCTTACTGTCACCGCAAGTTCCCATGGTCTAGCTCACTTAGACGTCATATTCTCACTCATACTGGGCAGAAGCCTTTCAAGTGTGCTCACTGTCCACTTCTGTTTACCACCAAGTCCAACTGTGACCGTCATCTACTGAgaaaacactctaaaaaatcaGCATCTCCACCCAGCTCAGCTCCCACCACTCCTATTCCTCCACCCCCTCCTCCCCCACCTTCTGAGGAGAGTTATCTAATGCGAAACGTGCCTGAACGTCCTTTCAAGTGCAACCTTTGTCCCAGCTCAACATTCTCCACCGAGCGTAACTTACGTAAACACGTAACAAGCAAGCACTCTGGTAAGAGAATGCCCTCTAATTCTCCCCCAACACCCACAACGTCTACATCAACAACGACCCCTCCTAGCGGCGGCAAAGATGCTCAGAGTGCTGCAGACAGTGGACGTGGTGCCAGCCCTGACCCTCTGCCTGCGAGTAGTGACAGCACCTCACCACCCGTACCCTCGGCGCTCACCTGCTACAAATGCAACCAAACCTTCTCCAGTGAGGCACGACTAACAGCTCATCTCGAGTCTCACTCAGACCTGCCATTCAAGTGTCATCTGTGTGAGAACAGCTACGCCGAGAGACAAGAAGCGCTGGAGCACATTCGCACCTCTCATGCCGCTGAGTACGAACTTCTAGTGTCCAAGGGAGCACTCGACCCTCATGCTGAGGACTGCACTGCCAATGCACCTCCAGCTACTctcaacaataacaacaacgaGACCGGAGATGATACACTCGAGACACTCAGGGGAAAATTCCCGGACTACGCTAACAGAAAGgtAATGTGTGCTTTCTGCATGCGTCGCTTCTGGTCGGCTGAAGACCTGCGTCGCCACATGCGTACACACACTGGTGAACGGCCCTTCACATGTGACATTTGCTGGCGCAAGTTCACACTCAAACATAGCATGTTACGTCATCGTAAAAAACATGCCACACATGGAGGATTCGCCATGGCTGCCAGTAATGAACAAGCCTGCAGTGATGACGATGCGCATTCCACTGACTCTGCACGAGAGGGTCTGCGCAGGTGGGCAGAACATGCCGGTCTTGCAATGTACAGTGGAACAGCCACTGCTCTACAGAGCAGACTAGCAGGGTTGCAAGGTCGTAGTGACCAACCCTCTGAGGAACATGACCTCATTGGTAACTTACTAGGCATCAAAGATCGCGCAATGATTGACCACATGTTGTCCAAGTCGGCAGACGATGCAGCAAAACTACTTGGAGTTTCAAGTCAACGATAG
Protein Sequence: MLWFRDDVKDARVKSLTFIPCSSTAAAATHTHGTDSSVVESCEENNVQDCSPATTSSAGTSSAPLAASAPSSPVTSPPQESPPPPSSSDSDHQPAESSAPTTESDLPTNLTGARKRKAHRVVKRETSSEGGSQVGEPERGSSSTEETLTCPVCEAVLTSQSEFTAHIRGHNVEPSSSLATPPGNNNNNNKVFSCSLCGKMLSSSSSLDRHMLVHSGERPFKCRICSVAFTTNGNMHRHMRTHNNNTSSVNNNHAHHLVDSDGSSDGASEKNVSRKRRSNGDLNVPSPKKRTEEGHVSPPVAAVPPDSCLSCQRCDKCFMTFNSERELSLHRYAAHAPHDDEPIIEEPKVSSGPAQVGFKDLNFVDFSTDKFPLIARAFCERSVHKASSVIHRFQCEECGRAFPCGSALHIHVTSAHAETSPRDLSCPRRKLHYEEQKEDFFAGLDLQTKSPSSSPPPTTTPTPIKVRAFSELAIPRREEDQPEDTEQPQDLADIPSILSVANRGALDLAKSPNSSADEGLRQMKLRGEFPCRLCTAVFPNLRALKGHNRVHLSTGPPYYCNMCVYNSNDKATLVRHLRTHNGERPFECRLCHYAFTTKANCERHLRNRHNKTSRDDVRRSITCHMGEDASSEKPHECAICERSFPSRSTALSHAAREHPTSTATELVRLGADPEEIEDEAELLMSPGNSPRPQERSSSPSSEEEPRRGAPSPLDLSMDALDLSKKPSAPQPVAPVANTPPQEAPQDLTKPKESHAPVLPPHHIPHLPHFLAHHPGLPTPPPPSAFFPNPLSMYLGSPFQRPSFPFYMPLFGNSPSPAATPPPPPPAAPTSSALDEVKEQLQKELIRGLQLTSGGSLVMDALRKPAPEPPRASPPPKPTPEPRPDPPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFWSQRPRGGRRSAPARPPPSPLPTPQPEITLLGESRISDEVKHALTQQLKQKLTSDDGSSAARRQEAEDAAVEGDVDEEDEPELVIDEAPPRRSPRDGDADLASVSRLLVNASAQNFQHYFPGHEEDDEEEEGFMEGDDEDEGVLDDGSSSEGGPLTSGDEGRGSRAGAPLSPGRVKKKSAYSSAPNRVTCPYCHRKFPWSSSLRRHILTHTGQKPFKCAHCPLLFTTKSNCDRHLLRKHSKKSASPPSSAPTTPIPPPPPPPPSEESYLMRNVPERPFKCNLCPSSTFSTERNLRKHVTSKHSGKRMPSNSPPTPTTSTSTTTPPSGGKDAQSAADSGRGASPDPLPASSDSTSPPVPSALTCYKCNQTFSSEARLTAHLESHSDLPFKCHLCENSYAERQEALEHIRTSHAAEYELLVSKGALDPHAEDCTANAPPATLNNNNNETGDDTLETLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFTCDICWRKFTLKHSMLRHRKKHATHGGFAMAASNEQACSDDDAHSTDSAREGLRRWAEHAGLAMYSGTATALQSRLAGLQGRSDQPSEEHDLIGNLLGIKDRAMIDHMLSKSADDAAKLLGVSSQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00630902;
90% Identity: iTF_00630902;
80% Identity: -