Basic Information

Gene Symbol
HIVEP1
Assembly
GCA_949318235.1
Location
OX439128.1:50053054-50066976[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00016 0.011 16.5 0.4 1 23 157 179 157 179 0.98
2 11 0.00053 0.037 14.8 0.7 1 23 185 209 185 209 0.89
3 11 0.00026 0.019 15.8 0.2 1 21 616 636 616 637 0.96
4 11 2.2e-06 0.00016 22.3 1.6 1 23 1302 1324 1302 1324 0.99
5 11 1.4e-05 0.00099 19.8 5.2 1 23 1330 1354 1330 1354 0.92
6 11 2.6e-05 0.0018 18.9 0.2 3 23 1830 1850 1828 1850 0.96
7 11 0.001 0.073 13.9 1.8 1 23 1856 1880 1856 1880 0.92
8 11 0.0016 0.12 13.3 2.7 1 23 1901 1925 1901 1925 0.93
9 11 0.0051 0.36 11.7 0.0 2 23 2062 2084 2061 2084 0.93
10 11 0.011 0.76 10.7 0.1 1 23 2129 2151 2129 2151 0.97
11 11 0.011 0.75 10.7 0.1 1 23 2157 2179 2157 2179 0.96

Sequence Information

Coding Sequence
ATGCTTGTCTTGTCGGTTTTCAACCTCAAAGCTAGTGGGATTCTCGGAAAAAATTCTCTTTGTGGGCTGACCCCTGCAGAAGATTCTCAGAGACAACCCTCTCCTGCCAGTGCTCATCCTCCGCCACGGAGGAAAGTGACCACCTCGTCATCGCCGTGTCTGACCTCGCTACTGCCTCCAGTTGCTCCAGGTGGTGAAGCAAGCAGTGGTCTGGATATATCGGAGAACGCACTGAGGAGTGGCGCACTTCCCTCTCGCAGCATGACTCCGCACGGCGAGGACCTGGGAGACCTGAGGTATCGTCACAAGAAGTTCAAGAAGATGGCTACGACAGTGGGCGTGGCTGATGACCTATCGTCCTCAGCAGCAACAAGTGACACTGGCTGGGAATCCCCCTCGCCAAGTGAGCACAGTAAGAGCTCCCCCTCCCCCACTGCCTCAGTGAATGGAACATCAGGTACTGGTCGTTACGTGTGTCCATACTGCAAGATGGCATGTGCAAAACCAAGTGTTTTACAAAAACATATAAGAGCACATACAAATGAACGACCATATCCTTGTGTACCATGTGGATTTgcttttaaaactaaaagtaatttatataagcATCGTAGATCAAGAGCTCATTTAATGAAAGCTGGAGGTCGAGATGAAACAGGCAAACTGATTCTGGAACATCCTGAGAGTTCATCAGAGATGGTGGCTACTCCATCCATGTCAGTGTCTGATGCAGATGAAGAAATAGATGAAGATGGTAGTCCGTTGTGTCCTACACCTGAAACACCACCTCTAAGTGCACCTCAGTTCCTCAATTCTATTCCTGGAGCAGCATACAGTCCACCTTCAGTTGAAAAACCACTTCGACCAGGAATCTATAAACCTAAATTCCATACTGCATTATATGATTCCAATGCAGCTCCATTGGAAAATAATCATGACCCTGAACTGCCTACAAGTAGTCCCTCATCTCCCAACTTATCTCGTAAGATTTCGTTAACCTCACCTTTGTGTTATTCTCCTGGAGCACCCAGTCCTGAAGTCATACATCGTCACATCAATAAATTGATTAGTGAAAATGAAGCTATAGTAGATACTAGAGATCCTTTATGGAATCGAAGATATTCCCGTCAACATTCAAACAGAGGGGAATCTAGAAGTCCAGAACCTCAAAATTTAGCACAAACTTCTTGgccaaataaaaaattctatagacAAGTAAGTGCTGGACCTTGTTTAACTGGAGGCAGAGAAAATAAAAGTTCCATGGAATCTATATCAAGTTCAACACCTCCTCCTCACTCTATAGCATCTCAAGCTAACTCACGTCTTGCACTTGCGTTGCTTAGACCTAAACAAGACGAGTGTAGTCCACCTGTGATGACTTTGCAAGGAGGAGCTACAGTAACATTGGAAGTTCCAAACAATAAGATTCCACCACAGCCAGTACCGGCACCATCTCCTCACCAGCCTCTAAATCTGAGTGTCAATAATCACatcaataacaacaataatcaACAACACCATCATGTTCAGCCTCACCAAGACAACTCGGAGTTACATCGTAAAAGATGTATTTCTGATAGTGTAGCTGTGGCTCCCACTGGTGTCCGAGAACTTCTCGTCAATTACTGGAGTCAACAACCACACAAGTTAGCAAGATTTATGGCAGATTGTTCACCAGGAGATAAAAATTTTCACCCACAAAATCCTGAAGGCTCAATAATTAAAGACTTGTTATTAAAAGCTCGTGGTGGAATGGATGTTACTGAGCTTTTAAACAATGCAGAATCTAATGCTGCTGCGTTATATACAATGGGTGATGAGCTTCATCCATCTTGTCAAGCTTTTGTATGTAATCtttgtaaaatatcatatagaAATGCAGAAAATCTAGAAATTCATCAACGTTATTATTGTAAGGGCTTGGAACAAAATATGCATTTGAAAGAAGACTCTAGACGGACACCTAAAAGTTCTCCTCACCCTTCATCATCACCTCGTAGCACACCTAGGAGTAAAAGTAGAGAGGATGCTtccaaaatggcagctgcagtGGAGCTTGTTGCATTAGCTACTCCACCTCCTTTCCCTTCACCAGGCCCTCTACTAGGTTCTACACCATTAGTAGGAGGCTACAATAGTTCCAAAGAGGAGTCCCCACCTCTGAAAAAACGGCGAGTTCATTCAGTGTCTGAAGATAGACCGCCATCAACAGGAAGTTTAAGATCATTAGAAGAATTATCTCGTTCTCCAATGTCACACCATAGACCTAACTCATTACAAATGTTTGGTGGGAAGGTACACATAAATGATGGAGCAGAAACCAAAACAATGATCATTGATCCAAGTAGAGGTGCTCCCAATTCTTCGTCTCTCCTAAGTATGCCTAATATAAACAATGACGATGGACGTGGAGATAATTCTGATAATAGAAAATCACCTACAAATATTGTGGTTACTATAGCGAGGTCTAACTTGAATTCTGGTGGCACTATAGTACAAAAAGCTGGCCATTCTTCCTCATCTTCCACCTCATGTACGTCAGTTTCTTATTCTGTATCTTCTATTACGTCAACCCTAGTTCCTGACCAACAGCTGCTTGCCGCAGTATCAAGACCAATTGTGCCAAAAATAACTACACCCAGCTTAGCACCAACATTGCAACATCATTTATCTCCATTCATTGCAAGTCATATGGCTAAGATGACAGCTTACAATCCACTGACTTTACCTTCCACTAATACACTGTCGACCGTGATGACTCCTCAACGACCCAGAAGTCCTGATGGCGTGGTGACGATTCTTCACGGAGGCAGGGAAATCCCCTATGTGCCAGGAATGCCTGGACCTCAATCGTTAGTTGATCCAAGACCTCTAGATTTGGCTTGCAGTCCAACTGTTCCTGTTAGACACATTACAGAGCCACCTGCAAAgaGACATCATCCTGCACAAATTCCAATACTACTAACTCCAAGTAAACATCATCCCCTCCCTCTTACAACCATGCCACCTTCCTCTAGTCTTCCTGAACCACCAAGTGTTAAAATAGCACCGTCACCACCCCCACCACCACCTGTTACACCAACAAAAATGGTTCCTTCTAAATCTCCAATAATACCTAGCATCAAAGTGGAAGCAGAGCCAAGTTTAAGTGTTCCGTCGTGTCTGGTAACTCCATCGATATCCACAGTAACATCCACCACTAGTACAGCGGCAACAACTGTCATGTCTATTGCTGAAACATCAGAATCTTCAAATAAAAAGTTCCTTAGACCAAATTCATTACCATTAAAACCAGGaacttatacattaaaaaagccATCTTCGTTAACTTCATTATCTGGTACAACATTAATAAGTCCCGAAACACCAAGACCTAGAAAATCTTATggacaattatatttaaatggtCATGCTTATACTTATCTTGGTTTAAAGTGTTCTACGAGAGTGTTTTTCTGTTGTTTAAATCAACCTCAACCGATGTACGTACCTCAAAGTACAGCACCTCGACTATCTATGTATTCCAACTGGAAAGTTTGTGCGCCATCTATTGAACCTCCTTCTGAGCTAGTCGGTTCTCCGGATCAAGCGATTGCATTGTATGACTCGAGACACAGACCTGCTGGCTACACAGTGGCTCGTAGTAGAGAACTTCCCTTGGTTATCACTCACTCGTCGCAGTGGAAGAAAGGACAACCTCCTAAAGCAAAGTCAGACGTGGACAACTCCAAATCTAAGGATTTTGCAGATGAAAGTACCACTTCAGGGACCAAGATATCATCAGCGGagggaACATCATCAAGTTCAGGTGAGAGCGCCCCTAAGAGAGTTAAAATCTTTGCTGGTGGTTTTGAATCTAATGAAGAGTACACCTATGTACGAGGTCGAGGACGAGGACGATATGTTTGTGAGGAATGTGGGATTAGATGCAAGAAACCTTCAATGCTAAAGAAACATATCCGAACTCATACGGATGTACGACCCTTCACTTGCAAGCATTGTAGTTTTAGttttaaaaccaaGGGAAACCTAACTAAACATATGAAATCAAAGGCTCATTATAAGAAATGTGTGGAACTTGGCATTGTTCCTGTACCAACTGTGGTGGATGACAGCTACATTGATGAGGAATCTTTAGCTAAGCAGCAGGCACTGAGGAGCGCACGAGGCGAGGACGCAGCAGAGTCTGAGTCTGAGGAAGACGAAGAAGATGAAGAGGAAGATGATGAGGACGAAGAGGAAGAAATGATGACACTCGGAGAAGGTGAAAATGGAGCAAGTCGACCTGAACGCGAAGCTGCTTGTAGTCTATTATCTCTATCTGAACAACATGCTGGTCTCATTCCTATTTCTGTAAGACCAAGTACATATCCATACTCCTACGGTCCACCAAGTTCAACTTCCATAGCACATACTCCAACCATAGTTGGTCCTGTCAGTGCTCACtcagagagagaaaaagtgTCTAGAAATACAAGATTAGCCGGCCCACCTGGAGGTACACCTAAATCCTCGGCAGCTCCAAGTTCAACTGGTAGAGTTGTCGTGGGGGATTCCTCAAGATATTACTTCCCGTCTCGTAGAGATCAGTCAAGTCCTCCTAGTAATGAGAAAAGTTCCGAAGGTTACGAGAGAAGTTCAACTGTGGTTACGTCGACAGATGAGGTATCAAGGTCTGCCTCAGTTGTATCTGCTACTAGTAACTTGTCAGCCACTCCTCCACCTATGGACTTAAGTCGTACTTCCACACAACAACAGCCAAGTCTATGCATGCCTCACACTCCAGTTACTCCTGTGCCAGATTCTGCTGCTCTCCTGGCAGCTCTGTGTAGTACAGTAGAGAGACTACCAGCTAAACTTCCCTCTGCTCCCACTACAGCTGAGACACCAGCAGAGACCACCATGCTACAAGCTTACCTCACAGAAAGAGCTCTACAAGACGTTCGAATAAAACAACATCAAGTTCATAGATGGAAAGGTTATAATGTACATCATGGTAGTGCAGCTTCTACACCTACTACACCTACAACACCAATGTTACCACATTCTCCATTAATATGGAGTGGTCAGAGTACTGTATTAACACCAACTTTAACTAATGTACCTAGTACTATTCTACTTCCATCTCCTATCAAGAAATTTAGTCCTGAAACTCTACAGAAATCCTTCACTGAAATACCTAAAGTTGAAATCACAACGAGCGTGTCTGTTTTAACAACGACTGTATCATCAAGTGCTGCGATGCCAGTGTCGAGTATCTCGGAGTTGAGTCACAAGCCCGTGGTCAGTCAGAGTGAGAGTACGAGCAGGAAGCTGATTGCTATTGGTCAGCAACATGTGGCGGCTGCAGCAGCTGCAGTGGCGGCAGCGGGTGGTTCTCCTCCTCATTCTTCCAGTCCTGGCAAACCTAGGGCGGAATTTTTGCCTCCCTCTTGTGGACCTTCATCAACTTATGCCAGTGTGACGGAGGATGGCAAGAGCATATGTGTGATCTGCAACAAAGTATTTTCTAAACCCAGCCAACTGAGGCTTCATGTCAACATTCATTACTTTGAAAGACCTTTTAGATGTGAATCTTGTGCTGTATCATTTCGTACTAAAGGTCATTTGCAGAAACACGAGCGCTCGGTCAGCCACCAAAACAAGGTAAGCATGAATTCGACATTTGGTATGCCAACAACAGACAACCCTAGACCATTCAAATGTGAGGATTGTAAGATTGCATTCCGAATACATGGGCATCTTGCCAAACACTTGCGCTCCAAGATGCATATTATGAAGCTAGAGTGTTTGGGCAAATTGCCATTTGGAACTTATGCTGAAATGGAACGCTCGGGTGTTAATTTGAATGAGATTGATACAACAGACTGTGATAATTCACTGGAAAGTTTACAGcATCTTGCTCAAAGGTTATATGAAAATGATCCATCTAAACTACAACAATGGGATCCAAGAATAAGAACGACAAGTGAGTCTTCAGAAGACATAGATGACATAGGAGAGCCATATTCAAGTAGCGTGATGGCACAGAACCACTTGGCAGCAATGGCTGGCAATGCATCGTCAGGCGAGGAGGGTCGCCCGATGTCACAAAGTAGACTGTCACAACACATGTCTGGCTCGGATTACGAGGAAACTTCTGATGGTGAGACTGAGGCTGGCCAGGAGTTGCAACACTTGAATTGTCCAGCTTGTGAGCAAAGTTTTCCATCACTAGGCTCACTAAAAGTACACATGTTCGTGGAGCATGACTCCGTGAGCAGCAAAGAGCGCTCAGCAGTGCTGCAAGACACCAGGACTGGCTCCAGTTCTCCGGGACAACATCAGACAGTGTCACCACCAGTATCTAACGAGGAATGTGGTGACATAGAAAGTAGGAGATATCGTTGTGACTTGTGTGGATTACTACTGAGGAATCAAGAGGCATTGCAGTCGCATGTTGCATCTCACGCTCAACCTCGTCCTTTTGTGTGCGAATTTTGTGATGCTGGCTTTACATCAAAGACTCTCCTACTTGGTCACCTGGCTCTACACCAAGCCAGTGGTTCACCACATGCTCCGATCACAGCTGCTACCAACTGTTCATTTTAA
Protein Sequence
MLVLSVFNLKASGILGKNSLCGLTPAEDSQRQPSPASAHPPPRRKVTTSSSPCLTSLLPPVAPGGEASSGLDISENALRSGALPSRSMTPHGEDLGDLRYRHKKFKKMATTVGVADDLSSSAATSDTGWESPSPSEHSKSSPSPTASVNGTSGTGRYVCPYCKMACAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHRRSRAHLMKAGGRDETGKLILEHPESSSEMVATPSMSVSDADEEIDEDGSPLCPTPETPPLSAPQFLNSIPGAAYSPPSVEKPLRPGIYKPKFHTALYDSNAAPLENNHDPELPTSSPSSPNLSRKISLTSPLCYSPGAPSPEVIHRHINKLISENEAIVDTRDPLWNRRYSRQHSNRGESRSPEPQNLAQTSWPNKKFYRQVSAGPCLTGGRENKSSMESISSSTPPPHSIASQANSRLALALLRPKQDECSPPVMTLQGGATVTLEVPNNKIPPQPVPAPSPHQPLNLSVNNHINNNNNQQHHHVQPHQDNSELHRKRCISDSVAVAPTGVRELLVNYWSQQPHKLARFMADCSPGDKNFHPQNPEGSIIKDLLLKARGGMDVTELLNNAESNAAALYTMGDELHPSCQAFVCNLCKISYRNAENLEIHQRYYCKGLEQNMHLKEDSRRTPKSSPHPSSSPRSTPRSKSREDASKMAAAVELVALATPPPFPSPGPLLGSTPLVGGYNSSKEESPPLKKRRVHSVSEDRPPSTGSLRSLEELSRSPMSHHRPNSLQMFGGKVHINDGAETKTMIIDPSRGAPNSSSLLSMPNINNDDGRGDNSDNRKSPTNIVVTIARSNLNSGGTIVQKAGHSSSSSTSCTSVSYSVSSITSTLVPDQQLLAAVSRPIVPKITTPSLAPTLQHHLSPFIASHMAKMTAYNPLTLPSTNTLSTVMTPQRPRSPDGVVTILHGGREIPYVPGMPGPQSLVDPRPLDLACSPTVPVRHITEPPAKRHHPAQIPILLTPSKHHPLPLTTMPPSSSLPEPPSVKIAPSPPPPPPVTPTKMVPSKSPIIPSIKVEAEPSLSVPSCLVTPSISTVTSTTSTAATTVMSIAETSESSNKKFLRPNSLPLKPGTYTLKKPSSLTSLSGTTLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFFCCLNQPQPMYVPQSTAPRLSMYSNWKVCAPSIEPPSELVGSPDQAIALYDSRHRPAGYTVARSRELPLVITHSSQWKKGQPPKAKSDVDNSKSKDFADESTTSGTKISSAEGTSSSSGESAPKRVKIFAGGFESNEEYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPFTCKHCSFSFKTKGNLTKHMKSKAHYKKCVELGIVPVPTVVDDSYIDEESLAKQQALRSARGEDAAESESEEDEEDEEEDDEDEEEEMMTLGEGENGASRPEREAACSLLSLSEQHAGLIPISVRPSTYPYSYGPPSSTSIAHTPTIVGPVSAHSEREKVSRNTRLAGPPGGTPKSSAAPSSTGRVVVGDSSRYYFPSRRDQSSPPSNEKSSEGYERSSTVVTSTDEVSRSASVVSATSNLSATPPPMDLSRTSTQQQPSLCMPHTPVTPVPDSAALLAALCSTVERLPAKLPSAPTTAETPAETTMLQAYLTERALQDVRIKQHQVHRWKGYNVHHGSAASTPTTPTTPMLPHSPLIWSGQSTVLTPTLTNVPSTILLPSPIKKFSPETLQKSFTEIPKVEITTSVSVLTTTVSSSAAMPVSSISELSHKPVVSQSESTSRKLIAIGQQHVAAAAAAVAAAGGSPPHSSSPGKPRAEFLPPSCGPSSTYASVTEDGKSICVICNKVFSKPSQLRLHVNIHYFERPFRCESCAVSFRTKGHLQKHERSVSHQNKVSMNSTFGMPTTDNPRPFKCEDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNEIDTTDCDNSLESLQHLAQRLYENDPSKLQQWDPRIRTTSESSEDIDDIGEPYSSSVMAQNHLAAMAGNASSGEEGRPMSQSRLSQHMSGSDYEETSDGETEAGQELQHLNCPACEQSFPSLGSLKVHMFVEHDSVSSKERSAVLQDTRTGSSSPGQHQTVSPPVSNEECGDIESRRYRCDLCGLLLRNQEALQSHVASHAQPRPFVCEFCDAGFTSKTLLLGHLALHQASGSPHAPITAATNCSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-