Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439129.1:25148572-25167349[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.4e+02 3.5 1.9 1 23 237 260 237 260 0.92

2 16 2.2 1.5e+02 3.4 0.9 1 23 265 288 265 288 0.93

3 16 0.019 1.3 9.9 2.6 2 23 399 421 398 421 0.94

4 16 0.074 5.2 8.1 1.5 1 23 486 511 486 511 0.95

5 16 2.2e-05 0.0015 19.2 1.8 1 22 660 681 660 684 0.91

6 16 4.1 2.9e+02 2.6 0.7 1 23 716 738 716 738 0.81

7 16 0.026 1.9 9.5 0.1 1 23 743 765 743 765 0.96

8 16 1.8e-05 0.0013 19.4 1.3 1 23 772 794 772 794 0.98

9 16 0.0063 0.45 11.4 0.3 1 23 800 822 800 822 0.95

10 16 2.7e-05 0.0019 18.9 0.0 1 23 843 865 843 865 0.98

11 16 4.2e-05 0.003 18.3 1.5 1 23 871 893 871 893 0.98

12 16 2e-06 0.00014 22.4 1.4 1 23 899 921 899 921 0.98

13 16 0.00011 0.0075 17.0 0.2 1 23 927 949 927 949 0.98

14 16 6.3e-05 0.0045 17.7 4.3 1 23 955 977 955 977 0.98

15 16 1.2e-06 8.2e-05 23.2 1.0 1 23 983 1005 983 1005 0.98

16 16 0.0011 0.076 13.8 0.9 2 23 1011 1033 1010 1033 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.4e+02	3.5	1.9	1	23	237	260	237	260	0.92
2	16	2.2	1.5e+02	3.4	0.9	1	23	265	288	265	288	0.93
3	16	0.019	1.3	9.9	2.6	2	23	399	421	398	421	0.94
4	16	0.074	5.2	8.1	1.5	1	23	486	511	486	511	0.95
5	16	2.2e-05	0.0015	19.2	1.8	1	22	660	681	660	684	0.91
6	16	4.1	2.9e+02	2.6	0.7	1	23	716	738	716	738	0.81
7	16	0.026	1.9	9.5	0.1	1	23	743	765	743	765	0.96
8	16	1.8e-05	0.0013	19.4	1.3	1	23	772	794	772	794	0.98
9	16	0.0063	0.45	11.4	0.3	1	23	800	822	800	822	0.95
10	16	2.7e-05	0.0019	18.9	0.0	1	23	843	865	843	865	0.98
11	16	4.2e-05	0.003	18.3	1.5	1	23	871	893	871	893	0.98
12	16	2e-06	0.00014	22.4	1.4	1	23	899	921	899	921	0.98
13	16	0.00011	0.0075	17.0	0.2	1	23	927	949	927	949	0.98
14	16	6.3e-05	0.0045	17.7	4.3	1	23	955	977	955	977	0.98
15	16	1.2e-06	8.2e-05	23.2	1.0	1	23	983	1005	983	1005	0.98
16	16	0.0011	0.076	13.8	0.9	2	23	1011	1033	1010	1033	0.93

Sequence Information

Coding Sequence: ATGGACTCTGTGGTTGAAGTTGAGTTTAAAGAACTTTGTCGAATATGTGCAAATCCAAGGCAACAAAATCAGAGTATGATGATATCAATATTTGAAAAAGAAGGGTTAAAAATTGAATTGGTTGAAAAAATAAACCGTTACTTACCAATAAATGTGTCTAAAGACGATGGATTCCCGGAAACAGTTTGCATCTCTTGTACGTCAAAGCTTAATGTGTGCCATCAACTAGTTGACACCTGCACTGAAGCAGATGAGAGACTTCAAGCTTTAAAACAGCAGCTTGACATAGAAACATCAAAACTGACATGCTACTCTCCTGAACCGAATTATGGTAATCTTCATTCACCAACTGATATCTCCTCTGATAGTGATGAAGATGCAACAAAGGGCGAGATCAAAAAAGAAAGTGGAAATGTAACTGACGTTAAAGAAGGCACACCAAGTGCTGCAAGCAGTCGCACTGTTTACGAACCTGGAGATTCCAAAGTTGCTGTTATACTTGCAGAGAAGGATGAAAAACCAAATACAAAACCCAATCTAAGCATCGTGCTGGTGAATGTTCCTAAGGAAGATCCAAGTGAAGCATCAGTGATGGGGAAAATAGAAAATTCTCTCAAACTTTACAGAGAAAGGTGTAGTAAACAAGTTTGTGACAATTCACTGCAAGAGAGGCCAATATTTTTACCATGCACTTTAAACACAACTAGTTACGCATGCTTCACTTGCCAGATTAAGTTTGTTGAAAAAGATGAAATGGTCTATCACTTTCAACATAGTCATCCTGACCAAGTATTCAAGTGTTTAGAATGCGAAGAACTTGTGTGTGGCAACAATGACATGTTAACCAAACATAAAGAACTGCACAAACAacaaactttgttttgtttGAATGATGCAGTTGATTTATTGGATAAAATGACAACTCCTGTTGATCCGTTAGTTGCTACATTTGAAGTAAAAGAACAggaattcaaagtaattcaaCTTGGAAAATATAATCCTAATCTAAAGAGTCCTACTAAAATAGCTGCTCAAACAAATAGATATATTCGTTTAGCTAAAATGAGTAAAAAAGTTGGACCAGATATGCTAGATAAAGTTATTATACTAATCAAAGAATTTTGTGATACACTAAAAATTGCATTTCAGCGAATTCCATCGTATTCCAAGTATTTCCAAGTATTTGATCCAGTTACTtgcaatatttgtaataaataccTTAAAAATAAACGCTATTTGAGTAATCATAAGTATAGATTCCATTCTCCAAATAATAAACGCTTGCAATGGAAAGGTAATTGTGTCCATTGTGAAAAACTTAGGGTGCCAGACTCTGAGCTAGATTCTCATATTGAAAGATTTCATAGTATAGGTAGATATTTGCTATGTGCAATATGTGATACAGAATATAGCAAATCTGGCCAAGAGCAACCACATATGCAACTTAGTAAACCATTCTCCTGTACTCACAAAACATGTAAACAAGTTTTTAAAAGTGAAGAAGCAGTAGCTAAGCATGTAAAAAATGTACATGATCCTAATCCAGTCTTGTGTAACTTTTGTGTAGTAAAAGTAGCATTTTGCATTTGTTGCAGTGACTCCGATAGTGAGGCTGAAAATGAACTTATTGACAAGAATCTTGATGATCATCAGCTAAGCCAAGTTATAGCTGAAGCAGAAATGATGCAAATGCAAGCTGCAGAGAATTTTTTGCGTAACCTGGAGGCAAATTTAAATGAAGCTGAACAACTAAAATTACctgaagaaaatgaaaaaatagcAACCatcaagaaagaaaaagaaactgaAAGTCAGCAGTCTCATCTCCAGATTTCTAGAATCAAATACAAAAAGAATGAAAATGCATCTCCGAACACTAATATTGGTAGTTCTGATGTAAGGAGAAGTCAAAGGCGcagagttaaaaataaattttatgattcagATTCAAATTCTCATATAAAGAATAGTCTATCTTATGAATGTAAACtttgtaaaaaagttttttcaaaTCCTTCAGGTTTAAGGATACACCATTCTAAAAATTCCCATAAATTACAACTTGAAAGAATGACATGTTTAACGTGTAGTGCTAAATTTGAAAATAGTGAAACTGCTGAAGATCATGTCTGTAATATTACTCAGTTCTTGTGTGAGCATTGTGACGATGTATTTACAAATGTTAAAGATGCAGACTTGCATAAATTACAACATTCAAAAGGACCTTTCACATGTGCAATTTGTAATGAGCAATTCAATAATTTAGCTATACTACAAGATCATATAATTCAACACACTAAAGACAGTAGACAGTACCAGTGTAATTTTTGTGGTAAAATGTTTAAGAGTAAATTAGGATTGCAAGGTCATCAATTACGTCATACAAATGCTCGtacttatttatgttatatttgtcAAGTACCATTTTCTAATAGGGATGAAATGTTATCACACAGATTGTCTCATTCTCAAGAAGAAAAAGACTTAGTtcaatcaaagaaaaataaagttgtgtCTCTTAAATATTTTCCTTGTGAATTATGTGGTAAAATGTTATCATCTAAAGCTGGATTAATAATTCATTTACGCATGCACAAAGGGGAAAAGCCATTTTCGTGTGATCAGTGTGGGCGTCAATTTCGTCAAGCTATTAAATTAAGATATCACCAACGTCTCCATGCTGGAGATTTACCATATATGTGTAATGTTTGTGAAAAACGATTTAATACACAACGTCAGTTAGATACTCATATGAGAGTTCACACAAATGAAAGGCCTTATATTTGTGAGGTTTGTGGGATGAGATTTCGATCAAATGGTGTTTTAGGTAGACATAGAAATACCCATAGTGAAGAACCACTTTTTTCGTGTTCTTATTGTGGTAAGAGGTTTCGTACTCGACATGCTACCACAGTTCACGAAAGAACACACACAGGAGAGAAAAGATTTATGTGTGATATATGTGGTAGAAGTTTTGCTCAAAAAACTACTTTAGAAAAACATAGAttgaaacatgaaaaattaagAGTAGAATGTCTAGAATGTAATACATCTTTTGCATCTAGAAAAGGTTTGCGTAGGCATTTTGAAAGGAAGCATACTCCTGTAATAGTAGAATCTATTCAGATGCTGGATGCTGCACCAAATGAATATGTTTCAGTACCAATGGATGACTTGGTTGTTGAAGTAGTAGTGTAG
Protein Sequence: MDSVVEVEFKELCRICANPRQQNQSMMISIFEKEGLKIELVEKINRYLPINVSKDDGFPETVCISCTSKLNVCHQLVDTCTEADERLQALKQQLDIETSKLTCYSPEPNYGNLHSPTDISSDSDEDATKGEIKKESGNVTDVKEGTPSAASSRTVYEPGDSKVAVILAEKDEKPNTKPNLSIVLVNVPKEDPSEASVMGKIENSLKLYRERCSKQVCDNSLQERPIFLPCTLNTTSYACFTCQIKFVEKDEMVYHFQHSHPDQVFKCLECEELVCGNNDMLTKHKELHKQQTLFCLNDAVDLLDKMTTPVDPLVATFEVKEQEFKVIQLGKYNPNLKSPTKIAAQTNRYIRLAKMSKKVGPDMLDKVIILIKEFCDTLKIAFQRIPSYSKYFQVFDPVTCNICNKYLKNKRYLSNHKYRFHSPNNKRLQWKGNCVHCEKLRVPDSELDSHIERFHSIGRYLLCAICDTEYSKSGQEQPHMQLSKPFSCTHKTCKQVFKSEEAVAKHVKNVHDPNPVLCNFCVVKVAFCICCSDSDSEAENELIDKNLDDHQLSQVIAEAEMMQMQAAENFLRNLEANLNEAEQLKLPEENEKIATIKKEKETESQQSHLQISRIKYKKNENASPNTNIGSSDVRRSQRRRVKNKFYDSDSNSHIKNSLSYECKLCKKVFSNPSGLRIHHSKNSHKLQLERMTCLTCSAKFENSETAEDHVCNITQFLCEHCDDVFTNVKDADLHKLQHSKGPFTCAICNEQFNNLAILQDHIIQHTKDSRQYQCNFCGKMFKSKLGLQGHQLRHTNARTYLCYICQVPFSNRDEMLSHRLSHSQEEKDLVQSKKNKVVSLKYFPCELCGKMLSSKAGLIIHLRMHKGEKPFSCDQCGRQFRQAIKLRYHQRLHAGDLPYMCNVCEKRFNTQRQLDTHMRVHTNERPYICEVCGMRFRSNGVLGRHRNTHSEEPLFSCSYCGKRFRTRHATTVHERTHTGEKRFMCDICGRSFAQKTTLEKHRLKHEKLRVECLECNTSFASRKGLRRHFERKHTPVIVESIQMLDAAPNEYVSVPMDDLVVEVVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -