Etor001559.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- ZFY
- Assembly
- GCA_949318235.1
- Location
- OX439127.1:21834891-21851401[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.22 15 6.6 0.3 2 23 105 127 105 127 0.93 2 19 0.41 29 5.7 1.4 2 23 136 158 135 158 0.94 3 19 0.062 4.3 8.3 1.2 2 23 166 187 165 187 0.96 4 19 0.54 38 5.3 0.3 3 23 193 214 192 214 0.91 5 19 5.3 3.8e+02 2.2 4.0 3 23 375 395 374 395 0.95 6 19 3.4e-05 0.0024 18.6 0.2 1 23 407 430 407 430 0.98 7 19 0.012 0.87 10.5 0.1 1 23 439 461 439 461 0.94 8 19 0.0026 0.18 12.7 1.2 3 23 474 495 472 495 0.94 9 19 0.042 3 8.8 0.3 2 23 504 526 503 526 0.90 10 19 0.0001 0.0072 17.1 1.3 1 23 535 557 535 557 0.99 11 19 0.089 6.3 7.8 0.7 1 12 563 574 563 576 0.92 12 19 0.0019 0.13 13.1 0.5 1 23 732 756 732 756 0.95 13 19 7e-07 4.9e-05 23.9 3.9 1 23 762 784 762 784 0.97 14 19 4.3e-06 0.0003 21.4 0.4 1 23 790 812 790 812 0.98 15 19 0.00034 0.024 15.4 0.4 1 23 818 841 818 841 0.98 16 19 2.6 1.8e+02 3.2 1.3 9 23 847 862 846 862 0.87 17 19 0.0036 0.25 12.2 4.7 1 23 873 895 873 895 0.96 18 19 3.3e-07 2.4e-05 24.9 0.5 1 23 901 923 901 923 0.98 19 19 2e-05 0.0014 19.3 1.6 2 23 931 953 930 953 0.96
Sequence Information
- Coding Sequence
- ATGGATATTGAAGATTTACCTTGTGAATTTGTTTGTGGCATAGAAGATGATGGAGCGTGTGAGATGGAGGTTTACTCAATGCCACAGGATGATCAAGTGTATTTAGTTTCAGACTCAGAGCTTCAGGCATTACAAAACTGTTTGGCTGAAACACAACCATTACAGTCATATGTAGGAGTTCCAAGATTTAGTGCAGCTAATCAAGTACTGCCACTCTTGACAAGTGTTTATGCAGAACGGAGATGTGATGAGGAACTTGGCTTATCAGCAGCCTATTGCCAAGCATTGCAACAGGAAGGGGGGGAAAGTCGTACTTGTCAGATTTGCGGAGAGAATTTTCTCTCAGCTACTCGTCTTTTGAATCATGTCAAACAGGAACATGGCTTGATAAACATCAATTTGCAACAGTGTTTTGTATGCAGACAGCGTTATGTGTTTCCCGTCTCATTAGTGCAACATTTACATCAGTTTCATGCTCTGGCTAGGCCGCAGCTAACATGTCCTGTTTGCTGTACTCAGCTGAGTTCCACGGCAGAGCTCAAAGCTCATCAACGTAAACATGCTCTTACTGAAGCATGCAATCAATGTTTTGCACACTTTGCTGCACCTCACCAACTTGCAGAACACATAGACGCTCTACATGACAAACCATTTCCATGTACttgGCAAGGATTTTGGCATGCTGATTTGTTGAAACGTCATGAGTTTCGTCACCAGACCATGTTCCAATCAAGTTGTGTTTGTGGCTGGCAAGCTATAGGAGTTGTTGACCAAGAATTAGCACTGCTGGAGCACATTGCAATTTGCTCCCCTCAGTATTTGCAGCAATTACTAGAGCAGGCTCGCAAAGAAGATCAAGAGGAAGCTCAACTAGATCTCTTATTGAAACAACATCAATTGGATATGAGCTCAgcaTTAGATGTCCAGAGTTGCACCAAAGATCTAATTGACAGCGTTTGTATTCTGAGTGCCAATCCAGCAAACTTAAATCTCAGTGCAGCACTGCCAGAGgTTGAACCAACTGTAAACAAGTACCAATGTCAAATTTGCAACCCTAACACCGAGTGGACTGTAGATGAGTTGCTTACTCATGTAAATTCAGTTCATGCTCGGAGTAAGGCATGTGCTTTGTGTCGCAAACGTTTCTCTTCCACTCATCGTGCTCATGCACATGCAAAACGTCACATGGCAGCCAGGGAAAAGAAATTACTGCAAGAGTATCAGTGCAATATATGCGATAAAGCAATACCATCTCGTTCAAAATTGAACGTTCATCTGGAAACTCAACACAAGattAATGTTGTAGAAAGACCGCATGAGTGCCCTTACTGTCCAAGGAAATTTGTTGCTGCAGCCAATAGAGATAAGCATGTTGCTATTCACAAAAGAGATTCTAGTGAAACAGAAGGAGTTGTAAATTGTCAACATTGTGAGGTATCATTCATCAAACCTAAATATCTACAACGACATGAGGAGAAATATCACCCCAAACCTGAAAATCCAAGTATTAAATGTGGCTCCTGTGGTGAAGAGATGAAGAGTCTGTCAAAGCTTCGTCGTCATATGGTGTTTGTTCATGGACCAGCTGCAGATACCCATAGATTTCAGTGTTCTCAATGCAGTGTGGGCTGTCGGACATCCTCAGGTCTTAAAGCTCATCTCAGGGTGCACAGCGGAGAACGTCCTTTTAACTGTCACATTTGCAACAAGGGATTTAAAAGAATGCAGattcATGTATTTCCAAACATTGATGGACTTCCTGCCACTCATCCTCATGCTCAACTCATCTCTCAGTTGGTAGAAAAGGAAGAGAAGAAAACTCAAGAATTGCCAAAATTTCAAACAGTAATGCTCCCAATAAAagTAGCAATACTATCTCATACATTACCTGAAGGAAATTTAGAAAATGAACTAGTCAATGATATAGGTTCTGACACTTACATTAATATTCTTAAAACTGATACCAATTATCCAAATATGACTTCTTATGAATTAGTTTCATCATATCCTAAAGCCGAATCTCTAGATGTACTAGAGCTACAACCTTTCCAAATCACAGATCAATTTATTTCTCAACCAGAACCTCTGCAAGCAAGGTGTgaaaatattttTGCCAGCAGTTTATACGGAGAGATGAAGCAAACTGTGGTCAAACAAGACAACAGCACCAAAAACCTGCAGCAAAATCATCGCTTTATGTGCTCTCAACCAGGCTGTAGCAAGGGCTTTGCTGAAAAATCCAGACTGGAGAGGCATAAGAAAATACATTCAGCTGTTTTAACACACTCTTGCACTATATGTGGCAAAGGATTCCGAGAGAAACATAACTTGACAGTTCATATGCGATCTCATAATGGGGACAGACCCTATAATTGTGGGGAGTGTGGTACTGCATTTAGATACCAGCAACAGCTAATTGAGCACCAGAGAAGCCATAAAGGGGATAAACCTTTTGTGTGTACCTATTGCCCTGATCGCAGTTTTGTGAGGCTCCGAGATCTTAAACGACATGTGGCTACACATGAACCTACTGTAAGGACACTGGCAAGAAAGGATACATTGACACAGCACATGAAGCATGCCCATTCCAGTCCTGCAGCTGAAGCATCTCCTGCCCACGAGTGTATGACTTGTGGCAAATTTTTCCATTCCTCACAACAGCTGCAGCAGCACAGAATCTTACATTTAGGTTCTAAAGATTTTGTGTGCAACGAATGTGGTAAAGGATTTGCACTGAAGAGTTATCTTCAAAGCCACCTTCGTACTCATAATAGGCGAAATAAATACCTACAATGTCATCTGTGCCCTCGGAAGTTTGCTAGCAGTAGTACTCTTGAGGTACATCAAAGTACATTCCATGTACCAGGTCGAATGCAGCAACGTCGCCAGCAGAATGAAGAAGAAGAGCAAGATGTAGAAGACCATGAAGCTGTGCTGCTGCATGTGTTAGCAGATACAGACTTTGATCTCATAACTGGATGA
- Protein Sequence
- MDIEDLPCEFVCGIEDDGACEMEVYSMPQDDQVYLVSDSELQALQNCLAETQPLQSYVGVPRFSAANQVLPLLTSVYAERRCDEELGLSAAYCQALQQEGGESRTCQICGENFLSATRLLNHVKQEHGLININLQQCFVCRQRYVFPVSLVQHLHQFHALARPQLTCPVCCTQLSSTAELKAHQRKHALTEACNQCFAHFAAPHQLAEHIDALHDKPFPCTWQGFWHADLLKRHEFRHQTMFQSSCVCGWQAIGVVDQELALLEHIAICSPQYLQQLLEQARKEDQEEAQLDLLLKQHQLDMSSALDVQSCTKDLIDSVCILSANPANLNLSAALPEVEPTVNKYQCQICNPNTEWTVDELLTHVNSVHARSKACALCRKRFSSTHRAHAHAKRHMAAREKKLLQEYQCNICDKAIPSRSKLNVHLETQHKINVVERPHECPYCPRKFVAAANRDKHVAIHKRDSSETEGVVNCQHCEVSFIKPKYLQRHEEKYHPKPENPSIKCGSCGEEMKSLSKLRRHMVFVHGPAADTHRFQCSQCSVGCRTSSGLKAHLRVHSGERPFNCHICNKGFKRMQIHVFPNIDGLPATHPHAQLISQLVEKEEKKTQELPKFQTVMLPIKVAILSHTLPEGNLENELVNDIGSDTYINILKTDTNYPNMTSYELVSSYPKAESLDVLELQPFQITDQFISQPEPLQARCENIFASSLYGEMKQTVVKQDNSTKNLQQNHRFMCSQPGCSKGFAEKSRLERHKKIHSAVLTHSCTICGKGFREKHNLTVHMRSHNGDRPYNCGECGTAFRYQQQLIEHQRSHKGDKPFVCTYCPDRSFVRLRDLKRHVATHEPTVRTLARKDTLTQHMKHAHSSPAAEASPAHECMTCGKFFHSSQQLQQHRILHLGSKDFVCNECGKGFALKSYLQSHLRTHNRRNKYLQCHLCPRKFASSSTLEVHQSTFHVPGRMQQRRQQNEEEEQDVEDHEAVLLHVLADTDFDLITG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -