Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: prdm10
Assembly: GCA_949318235.1
Location: OX439130.1:15419546-15431278[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0012 0.083 13.7 0.2 2 23 734 755 733 755 0.95

2 15 4.2e-05 0.0029 18.3 3.0 1 23 806 828 806 828 0.98

3 15 0.0009 0.064 14.1 4.3 1 23 834 857 834 857 0.96

4 15 0.0068 0.48 11.3 2.6 3 23 886 906 885 906 0.96

5 15 0.014 0.98 10.3 0.6 2 23 932 953 931 953 0.95

6 15 7.1e-06 0.0005 20.7 0.8 1 23 971 993 971 993 0.99

7 15 0.38 27 5.8 1.7 2 23 1002 1023 1001 1023 0.96

8 15 0.0057 0.4 11.6 0.0 1 23 1030 1052 1030 1052 0.98

9 15 0.00068 0.048 14.5 3.7 1 23 1058 1081 1058 1081 0.97

10 15 6e-05 0.0043 17.8 0.1 1 21 1086 1106 1086 1107 0.95

11 15 0.00035 0.025 15.4 1.9 1 23 1122 1144 1122 1144 0.98

12 15 1e-05 0.00073 20.2 2.1 1 23 1150 1173 1150 1173 0.94

13 15 0.011 0.8 10.6 1.9 1 23 1208 1231 1208 1231 0.97

14 15 0.00012 0.0086 16.8 2.3 1 23 1253 1276 1253 1276 0.97

15 15 0.00088 0.062 14.1 1.8 3 23 1316 1337 1315 1337 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0012	0.083	13.7	0.2	2	23	734	755	733	755	0.95
2	15	4.2e-05	0.0029	18.3	3.0	1	23	806	828	806	828	0.98
3	15	0.0009	0.064	14.1	4.3	1	23	834	857	834	857	0.96
4	15	0.0068	0.48	11.3	2.6	3	23	886	906	885	906	0.96
5	15	0.014	0.98	10.3	0.6	2	23	932	953	931	953	0.95
6	15	7.1e-06	0.0005	20.7	0.8	1	23	971	993	971	993	0.99
7	15	0.38	27	5.8	1.7	2	23	1002	1023	1001	1023	0.96
8	15	0.0057	0.4	11.6	0.0	1	23	1030	1052	1030	1052	0.98
9	15	0.00068	0.048	14.5	3.7	1	23	1058	1081	1058	1081	0.97
10	15	6e-05	0.0043	17.8	0.1	1	21	1086	1106	1086	1107	0.95
11	15	0.00035	0.025	15.4	1.9	1	23	1122	1144	1122	1144	0.98
12	15	1e-05	0.00073	20.2	2.1	1	23	1150	1173	1150	1173	0.94
13	15	0.011	0.8	10.6	1.9	1	23	1208	1231	1208	1231	0.97
14	15	0.00012	0.0086	16.8	2.3	1	23	1253	1276	1253	1276	0.97
15	15	0.00088	0.062	14.1	1.8	3	23	1316	1337	1315	1337	0.98

Sequence Information

Coding Sequence: ATGGATAACTCCGGGTCCCAGGAGTCTCCAGGAGAAGCGGACGAGGTTCCAGGATGTAAATCTGGAAGAGGCTCTCCAATGCCAAGCCAAGAAAGTGGAGAACTGGACTGGACAGCTGCCAGTTCATCTCACTTAGAACAGgTGGAATATGTGGAAGAAACTCCACATGAGTATGGGCGAGCCAGCTTTGCAAACTTTGAACCAGCAACTCCATTTTCCCCTCAACAATCCACTTCAATGGATTATGAACATCAAGTTAGTCCATTGGATCCTAATATGAGTTCTGCTGCCAGATATTCTCCTGTGTATTCTATGTCCAATTCTCTGGCTGTTCCCAATTCCCCACATGTGTTGGCAATATCAAATCCCAGTTCCCCTTATCCCAGTTCTGTTGGAATGCCTAATCCAAGCAGTCCTATAAGTTCAACAAATAATCCTGTTATGCCTACATCTCCAATCGATTACACAGGATCTCAAGTTGTAAGGCAACGTTCTTTAAATCAACAACGTGTCTGTCCTACTCCTGGTCCTAGCTATTCTGCAGCTTCATTAAGAAGTCCTGAATCACCTATTGCTGGACCTAGTGGTTTATTACGACAGAGTTTCTTTCACGCAGATAGGCTTACCCCTTCTCCTTCACCCCATTCCCCTCTACAAGCCCCAATGACACCATCAGATAACTTTGTATCCTCTTCTACTGGGCCTGCAGATGACACAAATCACTCCATCATAGCAGAAACTTCTGACTTACGATATTTATCACAAACAAGTGACAGTAATGGAATCCTTGATGCTAAAGTTGATTCTACCAGAGAGGTTGCTACTCCACTACATGACACTCATGATCTTGATAGTTCATCTCCACCAGAGAGCTATAGTCATGAAGCAACTCCTGTAAATTGCAGAGATGAAGATAAAAGTCCAGATAGTCAACATGTCGAAGTTCTCATTGGTTATGATACGTTACGAATCGTAGAACCTGATGCTCGTTACATTGCGTCAGCCGCTGAATCTTACCTCACAAATGGTGCACAAGTGGATTCTTTGGATCCTCTTGTGGTTGCTCTCAAAGGTCGACATAGCTTAGTATTCAGCACTGAAGGTCTTGCAAGAGCAGAGCTGTTGAGCCTAAAAGGCCGTGGACCATTATTATTGGATGGCGAAGGAAGCAGTAGTAGTGGTGGTCTTCCATTATTACTGGATTCAAGCATTGCAGGTCTGAAAGCAGAAAGTCTTGTCCTGGAAGGCATATCAGAGTTAGGAGCAGCGGAAGCTGGTGATCTTGAGGAAGGTGCTGTTCTTGAAACTTTGAAGACGAGAAGCCTTGATGTGCAGGATTTACAGCAGCTTGCACCATGCCCTCCTAATGTAAATGGAAATATGGATACTGATGGCAATATCAGTAGACCTCTTGCAAGCCCAGCTTTCTGTAACGATGAAGATATGGGAGATGAGAGTTTGTCTGAGCAGCTTGCCTCGCATGTGTTGCTGAATGAACGTCCAGAGTTGGAAGATGAGCATCATACTGTGGCCAAGCCTGGAGATCTTGATGACTCCTCTGCCTATGACTCAACATCAAGTGATATGTCAGCCTTACTACGTCGGTCCAAGCGACACAGCAGGAGTTCCCAAGGGGAGGAAAGTGGCAACGAAACATGGTGTGATGAGTGTTACCAAATGTACAATGGGGAGTGTCCTCAACACAGAGTTCAAAGTATCAGTGACAAGCCTGTACCTGCACGAGCATGGGCTAGTCTACCTGCTGCATACCTTGCTATCAACAAAATTGCTAAGCAAGGAGGGATGGGTGTTTTTGCTCGTAAAACTATACCAAAGCGTACTCAATTTGGTCCTTTAGAAGGATTAGTTATCAAACAAGAAGAATTTGCTATTGTTGAACAAGATGAAAACAGATTAGACCTCACAATAGAAATGACTAATGGACAGTTTGTTGTCTTAGATACTTCAAGTGAacATCACTCCAATTGGATGAAGTTTGTGCGCCCTGCGCAATGCTACACTGATATGAACTTGGTAGTGAGTCAACAGAATGGGTCATTGTTTTACACAACAACACGTGCTATTTTACCTAAGCAGGAGCTACAAGTGGGTTACAGTGCAGCGTATGCAGGCAAGAGAAATCTACCTGTTTTAGAACCACAGGAGGAAAATGccGAGGAAGATACTGAAAATGCTTGGCCTTGCTTTGAATGTAATCAACTGTTCTCCACTTCTGAAGGATTACAAAAACACCTAAATGATCATGATATTGAAAGGGATGGAGAAGATGATGCATCAAAAGGTAAAAACAAAAAGACAAATAGGGCAGTAAAGAGGAAGGTTCTGTCTCATttaccaattaaaaaatataaatcatcagATGAAAATACCCAAAATGATTCTGAGGAAGGAGACTTCAAATGTGGAACTTGCTCACGAAGTTTTCCCAAGAGCTACAGTCTCAAAAGACATCAACAACAACATTCTGGTGAGAAGAAACACCCATGTAACATTTGTGGTCAGCAGTTTACTCACCCTTACAACAGAGACAGACATCAGAAGAAAAATCATAAGAAGCTTGAAAATGGAGAAATCAATGGAAGGTTTTCAGGGTTgtttaaacagaaaaattctGGAGAGGAAGGTGCATGGTTATGCTCTCACTGTCACTTGACCTTTGACACAGCCTCTATGCTAAACTTACACACCCTAGCACATGCTGCTGAAGATCTAGAAGAACAAGATCAAGAAGATGCTTTGGATGCAATCCTTGATCCCAGCACGGAGCTCAAACAGTGTCCACAATGTTCACAGCAATACACATCAAAGCGTGAGTTAGTGGAACATACATCAGCTCACGGGAAAGCATTATTAAAAAGATTCCGAGGTTCAGTTAATCCAGCTAAACCATATAAGTGTGAGCTCTGTTATAAATCATTTGCTACTGAGGATCGTCTACAACGTCACATGCTGGTTCATGGTACAGAAGAGTCGAAGCCTCTACAATGTGAAACTTGTTTTAaaaggtttttaaataattcagcTCTTGCTTGCCACATCAAAGTTCATAAAGAGGAAAAGAAATCTTTTGAATGTCCAATTTGCCGAGCAATGTTTGACCAAGTAATGGCTCTTAAAGACCATGTACAAATCCATGCAAAGGATGGCATGTATACCTGTCCTCACTGCTCTAAGGTTTTTGAGGAATATAATCATATTCGGAAGCACATACGAGCTTTTCACAGTGATAAGCGGTTTCCCTGTACCCTCTGCGAGAAAGTGTTTCCTAGACCTGACAAACTCAAACTTCATATGCTAAGCCTCATAAGGAAACATATTCGAGCCTTTCATAGTGAAAGGAAACATACTTGCTCTTCTTGTGGCAAATTGTTTCCAACCCTGGATAAACTAAGAATGCACATGTTGAGGCATTCTGATCATCGCGAGTTCCTGTGTGCAAATTGTGGCAAGCAGTTCAAACGCAAGGACAAGCTAAAGGAACACATGAAACGCATGCACTCCGCAGAGAGGGAACTCAAATTGGCCCAGAAACCTAACCGACAATCTTCTGCAAAGAAATTCATACCAAAGGTATCTCCTACTGATTATCATCGCTTCATCTACAAATGCCACTCGTGTCTCCTTGGCTTCAAGAGACGAGGTATGCTCGTCAACCACCTAGCAAAGCGACACCCTGACATCAGTCCAGAGTCAGTACCAGAATTAAATTTGCCCATACTTAAAACTACAAGAGACTATTACTGCCAGTACTGTGACAAGGTTTATAAGAGCAGTTCTAAAAGGAAGGCACATATTCTCAAGAATCATCCAGGACTTGAACTACCTATGAGTAACAGACGCAAGGGTGGAGTACCAGAAATACCAGGCGTACCTAACCCAACTTTCTCTCAGACTGTGGGAAGTATTACTACTCACCCACATGGTTGTCCTTGGTGTCACAAGCAATATGCTTCTAAAGCTAAACTTCTTCAACATCAAAGAAAGAAACATCCAGATCTGTTACCTCACTCTCACCAAATGGGAGAGATATCTCGTAATGGTCGTAATGGTTGCTCAGAGAGCTCTTCTGAAGGAGAAAACATTAAATACAGCAGTGGCAAGTGGCTGACTACAGACGGAGAACAAGTAGATGTGATTCAACTTCATGGAGAAGGAATTCTCACTTCACAAGTGAACATTTTACCTAGTGGTGGAGAAGTTGAATATCAAATTGCAACAGACCAAGAATTGCAAGAGCTGCAAGAGTCAGGCATTATAATTGATGCCACTACATTGAAACGACCTATGAAAGGTTGTGGTGAAGGAGACATGTTATCTCAAGCCATGTCTGAGTTGACTCAGTCTCTGGCTGAATTTCGTTCAGTTCCTAATGAAGGAGAAGGTCAGGATCACTATATGAAGATCCTACACACTGGTCACATCATGGTCACACAAACATCAGCAGCCCAAGTAATGGCAGAAAATTCTCCACTGACAAACATGGATACTTCTGAACAACAATTAGAGGATTCTGGAGGAAGTCCTGGAGATGAGGAAACTGTAACTGTAACAGCAGCACAGATTGAATCTTCACAGTTACGTCAATTACTGACAAACTCGTATAACTTACCACCTTCACCTCCTCCGTCTAATGGAAGTCAGCAGCAACAACAGTCCTTAGCCATTTTACCACGAGGTTGGGCTGCAACATTTACATCATATACAGCTCGCTGA
Protein Sequence: MDNSGSQESPGEADEVPGCKSGRGSPMPSQESGELDWTAASSSHLEQVEYVEETPHEYGRASFANFEPATPFSPQQSTSMDYEHQVSPLDPNMSSAARYSPVYSMSNSLAVPNSPHVLAISNPSSPYPSSVGMPNPSSPISSTNNPVMPTSPIDYTGSQVVRQRSLNQQRVCPTPGPSYSAASLRSPESPIAGPSGLLRQSFFHADRLTPSPSPHSPLQAPMTPSDNFVSSSTGPADDTNHSIIAETSDLRYLSQTSDSNGILDAKVDSTREVATPLHDTHDLDSSSPPESYSHEATPVNCRDEDKSPDSQHVEVLIGYDTLRIVEPDARYIASAAESYLTNGAQVDSLDPLVVALKGRHSLVFSTEGLARAELLSLKGRGPLLLDGEGSSSSGGLPLLLDSSIAGLKAESLVLEGISELGAAEAGDLEEGAVLETLKTRSLDVQDLQQLAPCPPNVNGNMDTDGNISRPLASPAFCNDEDMGDESLSEQLASHVLLNERPELEDEHHTVAKPGDLDDSSAYDSTSSDMSALLRRSKRHSRSSQGEESGNETWCDECYQMYNGECPQHRVQSISDKPVPARAWASLPAAYLAINKIAKQGGMGVFARKTIPKRTQFGPLEGLVIKQEEFAIVEQDENRLDLTIEMTNGQFVVLDTSSEHHSNWMKFVRPAQCYTDMNLVVSQQNGSLFYTTTRAILPKQELQVGYSAAYAGKRNLPVLEPQEENAEEDTENAWPCFECNQLFSTSEGLQKHLNDHDIERDGEDDASKGKNKKTNRAVKRKVLSHLPIKKYKSSDENTQNDSEEGDFKCGTCSRSFPKSYSLKRHQQQHSGEKKHPCNICGQQFTHPYNRDRHQKKNHKKLENGEINGRFSGLFKQKNSGEEGAWLCSHCHLTFDTASMLNLHTLAHAAEDLEEQDQEDALDAILDPSTELKQCPQCSQQYTSKRELVEHTSAHGKALLKRFRGSVNPAKPYKCELCYKSFATEDRLQRHMLVHGTEESKPLQCETCFKRFLNNSALACHIKVHKEEKKSFECPICRAMFDQVMALKDHVQIHAKDGMYTCPHCSKVFEEYNHIRKHIRAFHSDKRFPCTLCEKVFPRPDKLKLHMLSLIRKHIRAFHSERKHTCSSCGKLFPTLDKLRMHMLRHSDHREFLCANCGKQFKRKDKLKEHMKRMHSAERELKLAQKPNRQSSAKKFIPKVSPTDYHRFIYKCHSCLLGFKRRGMLVNHLAKRHPDISPESVPELNLPILKTTRDYYCQYCDKVYKSSSKRKAHILKNHPGLELPMSNRRKGGVPEIPGVPNPTFSQTVGSITTHPHGCPWCHKQYASKAKLLQHQRKKHPDLLPHSHQMGEISRNGRNGCSESSSEGENIKYSSGKWLTTDGEQVDVIQLHGEGILTSQVNILPSGGEVEYQIATDQELQELQESGIIIDATTLKRPMKGCGEGDMLSQAMSELTQSLAEFRSVPNEGEGQDHYMKILHTGHIMVTQTSAAQVMAENSPLTNMDTSEQQLEDSGGSPGDEETVTVTAAQIESSQLRQLLTNSYNLPPSPPPSNGSQQQQQSLAILPRGWAATFTSYTAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -