Etor018316.2
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- -
- Assembly
- GCA_949318235.1
- Location
- OX439134.1:32622020-32635094[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.37 26 5.9 0.1 1 23 141 164 141 164 0.92 2 20 0.37 26 5.9 4.0 2 23 193 215 192 216 0.93 3 20 0.0016 0.11 13.3 4.0 1 23 223 246 223 246 0.97 4 20 0.014 1 10.3 0.1 2 23 401 423 400 423 0.94 5 20 0.3 21 6.2 0.5 2 23 630 653 629 653 0.92 6 20 0.46 32 5.6 1.0 1 23 669 692 669 692 0.94 7 20 0.0066 0.47 11.4 1.1 1 23 731 754 731 754 0.98 8 20 3.2 2.3e+02 2.9 0.3 2 23 766 788 765 788 0.94 9 20 0.044 3.1 8.8 7.6 1 23 794 817 794 817 0.97 10 20 0.37 26 5.9 0.2 3 23 825 846 824 846 0.96 11 20 0.027 1.9 9.4 2.0 1 23 854 877 854 877 0.95 12 20 0.0015 0.11 13.4 0.8 1 23 883 905 883 905 0.96 13 20 3.3e-06 0.00023 21.8 0.7 2 23 912 933 911 933 0.97 14 20 8e-08 5.6e-06 26.8 2.5 1 23 938 960 938 960 0.98 15 20 0.00051 0.036 14.9 2.8 1 23 966 988 966 988 0.99 16 20 1.9e-05 0.0013 19.4 4.8 2 23 995 1016 994 1016 0.96 17 20 4.9e-05 0.0035 18.1 0.2 2 23 1023 1044 1022 1044 0.95 18 20 3.5e-05 0.0025 18.5 0.0 2 23 1051 1073 1050 1073 0.94 19 20 1.4e-06 0.0001 22.9 0.3 1 23 1079 1101 1079 1101 0.98 20 20 0.00078 0.055 14.3 0.8 2 23 1108 1130 1107 1130 0.94
Sequence Information
- Coding Sequence
- ATGTATCATAACAATGAAAATGATCAATACGTCAATAATCAAACCCCCTCCACTTCATCAGGAGCCTACAACACATCATCATCTCAGCAACAATGTACATCTATGTATAACaatcaatcaaattttatattggaAAATACGAGTAATTTACAAGATTCTGGTGAAAGTGATGAAGAAACGAGTGGTTCGTCGAGTGATTCCAGCATAGAACCATGTAACGTTTGCCTACAGACGAGATGTATATGTGATACCCCCAGTAACGACTTTGACCCTTCATTGTTACAGTTACAGCTACCTCAGATTGCATTGTTAATGCAACAATCACAACAATCTATCACATTACAAGATACCACACCTACGTCTACCTCATTTGTACCTTCAAAAATATCATCGGAAAATAATTTATCACAGCTACCACCGTTCGTATGTCAGATATGTGGTGAGTGGTTCGTCGTCCATGAGaagttagtgctacatttagtCGTGAACCACTCTATGGTTTACTGTAAGTTCTGTACCAAGTTATATTCATCTCAATCAGAGCACCCTGTGTGCTTAGCTCATAGAGGTACCTTACCATGTGAAATGTGCCATTCTCACTTCAGAACTAACTCATCGACTACGAATCATGAACTGTCTAAACATCAAAATCAAGTCCACGATCTGCATACCTGTCCACTATGTGGGCTCACATTTCATCCAAAATCTACATTTATAAATcacttaaaaagaaaacatttatgtaaaaattcacAATTAATTGAAAGAAATGAACATTTAGAAGGAATTATCACAGAAATTAGAACTGATACTTGGttatttcattgtaaaatatgtaaaaatgatattaaaaaattagaattatttgGACATTTCAATACGTATCATAAGTTGACATTAGCGTGTATGATTGAGTTATTACATTATGGACGTATATTTATTTCTGTGCAAGGTTATTCATCGTCAAATCTTAATAACGCAACGACAACAACAAATATCTCAGGAAATCATCATTATAGCAATAATCATAATCAACAAATAGATTGTTGTACAGTGTGTTCAAAACCAATAACAATTCAAGTGCCAAAAATTGCTCATGATATATTTTGTGCTGGAATGActtattgtaaatattgtattttatcattCACTTCACCGTTAGTTAGGGAATTACATTTAGTACGTGAGCATCCGACGATACCTTGTACCTCTTGCGGAGAAACTTATCCCGTTGAATCATCGTTAATCACTCATCACGCGAGAATACACGGCGTGGTAGAATGTTACTGCTGCGATATTATGATACCAATTACGTCTGGCTCATTAGAAAATCACTTAGTTACCAGACATCTGTGTAACGTCCCCATTAACATGTCGATAAGTATTGACAATAATTTATTAGGTTGTAATCTGTGTATTACTTCTAATAAATATACGTGTCAAGGTAATGATCTGtcaagtatttttatacatCTGCGGCATGATCATTTTGTAGCTTCAAATAAAGCATTGAGTATATTATCAAATGTTAATACAAATGCTGAAGATGatggtaaaattaaaattgaagacGTACAACAAGAAACCTCAACAATACCTCAATATGCTCAACAATCGACTTCAGAGTGGAGTTCAAATCATCACCAAAgtagaaaagaagaagatacGGATATATTGGTACCTCAAGTGGATATAAATACTGTGTCGGATAACGAAACAAGCGGTGACGAGGCACAAAGTATTTCTGACGTTCAAGATGGTGAATTGTCAGAATTAGAAGAGGAAGATCGAAGTGTCGGAGATGCAGAAGTAGACCCCGAGGATATAGATTGTGTATCAGATTCCAGTGAAGATGAAGAAATTATAcctcaaaatattgaaaaattaaattgtgaaTTGTGTAATGAAAAAGATTTTATAAGTCCTCGAGATTTATGTgcacatttattttcaatacataaattacattgGGATCGTAAGAGTCATGACCACAGTGATGCCCAGTATCACTGCAGGTTATGTGGGTATAAGGCAGTGGACAGAACTGATATGTTGAAACATAAGATGGAGGTGCACCAAGAGGAAGAGCCCATGGGAAGTAAATGTAGGTTTTGTGTGCAGCAGTTTCGACTAGCCGAGGTTAGAAACCAACATCAGTTACAGCTGCACTCAGATCAACAGAGAAGTTTTTATAGATGTCCTTACTGCCAGCATATCACCTCTAGCACGGTTGTTCTGTCACGTCACATCCTGACCTCCCACCCTACTGAGCCACTAGGTTGTGGAGTCAGGGTAAAATGTCGAGTATGCTTGTTTCTCTACCCCTCCATCACCTCCCTGCGAGCTCACTTCCGCTCAGTACACCCCGCAGCCATGGTGTTCAGGTGCAAACATTGCAACGCTCACCTCAAGACACGCAAGACCCTGCGCCACCACGTCAAGGTCGTCCACTCTGAGGCTAGGAGGAAGGACTGTTCCTTATGTGGCAAAGTGCTCTGGAGTAAGAGAGCGTACGCCATACACTATCGTATGAAGCATAGTAAAACTTCTAAAGTGGGATTTAGATGTCGCATTTGTCAACAGAGATTTGACTCAAAGGAACAAAGGAAGCTACATTACACCATAGACCACGAGGGAGAAAGTCCGTACCATTGTGTGGACTGTGGCAAAGGCTTTGCAAGCAAGTCCGGGATGTACGGACATAGACAGCTGCACACTGGCTCTGGAGTTAGCAAGTGTGAATATTGTGGCAAGGAGTTTACTAGAAAGGACAGTTACAATGAACATCTACTGATCCACAATGGACCACGTCACAAGTGTCCGCACTGTCCCAAGGAGTTTGTACAGAGGTCTAACTTGGTCAGACATATCAGAATACACACAGGAGAGAAGCCATATCAATGTACGTTCTGTGAGAAGAGGTTCTCAGACAAAGGAGCTTGTAATTCTCATATCAGAGTTCACACCAGAGAGGAGACTTGCAGTTGTCCTTACTGTGGTCAGACTTTCTCCAAGAAACAGaaactgaaataCCACATCAGAAAACATACAGGAGAAGGCCTGATTGAATGTGAAATCTGCAATAAGATGTTCACCAACAGCTTTGCTCTCAAAGAACATCGTGTCATTCACAACAGACAAACTCAGGTGGTGTGTCCGCAGTGTGGCAAAGGCTTCAACTCTGAGAAATATCTGCAACGTCACGTCGCCATCGTGCATGAGCCTTCCAACGCTTTCTCTTGTCCACTGTGTCCTAAGACTTTCTCTCAACAAGCACGTCTCAAAGCACATGTGATGACTCACAGTGGGGTCAAGCACATGAAGTGCTTGCTATGTGACAAGGCTTACTCTGTACGCAAGTCCCTGCGACGACACTTGCTGGAGAAACATCagGTGAGCCCTGACCACCCTCAATACAAGCAAAGTTTCCACGCTATGTCACCTGAGGAAGCAGGTCTTGGCTTATCAGTAACATCAGGACGTTCACCTCGACGTAGCTCACCACGTAGCACGTTACCCACGACGACGTCAGAGCCCAGAGCTACCTCAGAACCTGCCTCCACTGCATCAGGTAAAAAACGTAGGAGAGTTGAACAGATTGTACAAAGTTTACAAAACTCCTTGAGTACTCAAGTTGATCACGCCACGCCATCCACGTCAACGTTAGCAAGGATCAATCCGTTAGTTATCAACTTACCTAAGGCAGGGAGTCGTAAGAAAATGACGGTACGAGCTCGTAGTAAAGCTGAGTTGAAGAAACGTCACAGAAAAGTCAATTCCTCTGAagatgatgaagaagaagacgaGGAGGAGGTAGACGAAGGATTGAACTTAACTGTCGTTGTAAAGCAGGGAGATTCAGAGGCCAGTACGGACAGCTGA
- Protein Sequence
- MYHNNENDQYVNNQTPSTSSGAYNTSSSQQQCTSMYNNQSNFILENTSNLQDSGESDEETSGSSSDSSIEPCNVCLQTRCICDTPSNDFDPSLLQLQLPQIALLMQQSQQSITLQDTTPTSTSFVPSKISSENNLSQLPPFVCQICGEWFVVHEKLVLHLVVNHSMVYCKFCTKLYSSQSEHPVCLAHRGTLPCEMCHSHFRTNSSTTNHELSKHQNQVHDLHTCPLCGLTFHPKSTFINHLKRKHLCKNSQLIERNEHLEGIITEIRTDTWLFHCKICKNDIKKLELFGHFNTYHKLTLACMIELLHYGRIFISVQGYSSSNLNNATTTTNISGNHHYSNNHNQQIDCCTVCSKPITIQVPKIAHDIFCAGMTYCKYCILSFTSPLVRELHLVREHPTIPCTSCGETYPVESSLITHHARIHGVVECYCCDIMIPITSGSLENHLVTRHLCNVPINMSISIDNNLLGCNLCITSNKYTCQGNDLSSIFIHLRHDHFVASNKALSILSNVNTNAEDDGKIKIEDVQQETSTIPQYAQQSTSEWSSNHHQSRKEEDTDILVPQVDINTVSDNETSGDEAQSISDVQDGELSELEEEDRSVGDAEVDPEDIDCVSDSSEDEEIIPQNIEKLNCELCNEKDFISPRDLCAHLFSIHKLHWDRKSHDHSDAQYHCRLCGYKAVDRTDMLKHKMEVHQEEEPMGSKCRFCVQQFRLAEVRNQHQLQLHSDQQRSFYRCPYCQHITSSTVVLSRHILTSHPTEPLGCGVRVKCRVCLFLYPSITSLRAHFRSVHPAAMVFRCKHCNAHLKTRKTLRHHVKVVHSEARRKDCSLCGKVLWSKRAYAIHYRMKHSKTSKVGFRCRICQQRFDSKEQRKLHYTIDHEGESPYHCVDCGKGFASKSGMYGHRQLHTGSGVSKCEYCGKEFTRKDSYNEHLLIHNGPRHKCPHCPKEFVQRSNLVRHIRIHTGEKPYQCTFCEKRFSDKGACNSHIRVHTREETCSCPYCGQTFSKKQKLKYHIRKHTGEGLIECEICNKMFTNSFALKEHRVIHNRQTQVVCPQCGKGFNSEKYLQRHVAIVHEPSNAFSCPLCPKTFSQQARLKAHVMTHSGVKHMKCLLCDKAYSVRKSLRRHLLEKHQVSPDHPQYKQSFHAMSPEEAGLGLSVTSGRSPRRSSPRSTLPTTTSEPRATSEPASTASGKKRRRVEQIVQSLQNSLSTQVDHATPSTSTLARINPLVINLPKAGSRKKMTVRARSKAELKKRHRKVNSSEDDEEEDEEEVDEGLNLTVVVKQGDSEASTDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -