Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439130.1:14584917-14596312[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.016 1.2 10.1 0.0 1 23 335 358 335 358 0.97

2 19 0.0016 0.12 13.3 0.0 3 23 365 386 364 386 0.95

3 19 0.023 1.6 9.7 1.3 1 21 503 523 503 526 0.90

4 19 3.8 2.7e+02 2.7 0.2 1 23 529 552 529 552 0.90

5 19 0.0018 0.13 13.1 0.7 3 23 556 577 555 577 0.97

6 19 0.00018 0.013 16.3 1.0 1 23 584 606 584 606 0.98

7 19 0.0084 0.59 11.0 4.3 2 23 613 634 612 634 0.95

8 19 3.4e-05 0.0024 18.6 2.0 1 23 645 667 645 667 0.98

9 19 0.00081 0.057 14.2 4.8 2 23 674 695 673 695 0.95

10 19 0.00096 0.068 14.0 2.6 1 23 701 724 701 724 0.95

11 19 0.12 8.5 7.4 0.2 3 23 732 752 730 752 0.92

12 19 0.0023 0.16 12.8 3.6 1 23 774 797 774 797 0.95

13 19 0.026 1.8 9.5 0.1 3 23 815 835 813 835 0.96

14 19 0.0013 0.092 13.6 0.6 1 23 844 866 844 866 0.99

15 19 0.00033 0.024 15.4 0.3 1 23 872 894 872 894 0.98

16 19 4.8e-08 3.4e-06 27.5 0.6 1 23 900 922 900 922 0.99

17 19 6.9e-05 0.0049 17.6 7.9 1 23 928 950 928 950 0.99

18 19 1.1e-05 0.00076 20.1 0.2 1 23 956 978 956 978 0.98

19 19 0.028 2 9.4 2.0 1 23 984 1007 984 1007 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.016	1.2	10.1	0.0	1	23	335	358	335	358	0.97
2	19	0.0016	0.12	13.3	0.0	3	23	365	386	364	386	0.95
3	19	0.023	1.6	9.7	1.3	1	21	503	523	503	526	0.90
4	19	3.8	2.7e+02	2.7	0.2	1	23	529	552	529	552	0.90
5	19	0.0018	0.13	13.1	0.7	3	23	556	577	555	577	0.97
6	19	0.00018	0.013	16.3	1.0	1	23	584	606	584	606	0.98
7	19	0.0084	0.59	11.0	4.3	2	23	613	634	612	634	0.95
8	19	3.4e-05	0.0024	18.6	2.0	1	23	645	667	645	667	0.98
9	19	0.00081	0.057	14.2	4.8	2	23	674	695	673	695	0.95
10	19	0.00096	0.068	14.0	2.6	1	23	701	724	701	724	0.95
11	19	0.12	8.5	7.4	0.2	3	23	732	752	730	752	0.92
12	19	0.0023	0.16	12.8	3.6	1	23	774	797	774	797	0.95
13	19	0.026	1.8	9.5	0.1	3	23	815	835	813	835	0.96
14	19	0.0013	0.092	13.6	0.6	1	23	844	866	844	866	0.99
15	19	0.00033	0.024	15.4	0.3	1	23	872	894	872	894	0.98
16	19	4.8e-08	3.4e-06	27.5	0.6	1	23	900	922	900	922	0.99
17	19	6.9e-05	0.0049	17.6	7.9	1	23	928	950	928	950	0.99
18	19	1.1e-05	0.00076	20.1	0.2	1	23	956	978	956	978	0.98
19	19	0.028	2	9.4	2.0	1	23	984	1007	984	1007	0.97

Sequence Information

Coding Sequence: atgaATCCTACTCGATCAAATATAGGATCTGTTTGCACAGTTCTCAACTGCAGGAATCGCCATGGCCACCTGAAAGCAGATTCAACTTCAGACCATGTTCGTTACTACTGCTTTCCTACAGATACATATTTCCGTAACTTGTGGATTCAGAGATGTGCACAGCCTGGAAACTGGAATCCTGATGTCTGCAAAGTTTGTTCAATACATTTTTGTGAAGAAGACTATGAAAGAGATATAAAATCAGAACAATTAAACCTACCTCGGAAATGGGTCTTGAAGCAAAATGCAGTACCAACATTACATTTGGATAACACAAATAATGTTAGTGCCCAGCAGTTGCAAACTAGAAACCTACACGAAGAACATAGTGTTGatgaacAGTTGCTTAGGCCATCAGACTTTCTTGCAGTGTCAGTAAAAGAAGAAACCATGGAGGAAAATGAGAGACTTGTGCCTTCTATACAAGCACCACCTCGAGTTAAGCAATTATGCAGAGTTTGTGCAGGAGCAAGTAAAGTTATGCTGCATATTTTTGAGGGACAAGGAAAGCAGAAATTTCTTGCTGAAAAAATCCAAAGATTTCTGTACATTGAGGTGTGTGAAGATGATCGACTTCCAGTACAAGTATGTGAGACGTGTGTGAGTGCTCTGGATGCATGTGATGAGCTGGCTCAGCGCTGCTTACAAGCTGAGGCTACTTTGAGGAGATTACTACAGGAGGAAGACAAAGCAGGACTGGAGTGGGAAATTCAGTGTGAAGCTGACAACTCCACTTGCTCTATAGATAATATGGGTGGATCAAGCCCGATTTGGAATAAAGATACATCAACTGATCCAGCTATTTCAAGGCAAAGTAATGAAAAGCAGGAGGACAAGACATCTCACCTGCAAAAAGGCAACTGCAAATTAAAGGAGATGCACCTAGAAACTGAAACTATTCCACTTGCAGAACGACTTGCTAGATTAAAAAATCAGAACAGTAATAATACATCAGCTAAGCAGTTTTCTTGTTGGGAGTGTGGTGCAAATTTGGAAGACCTAGGCAATTTTATTGAACATCAGAAGTCTGTACATTCAAGAGAGTTGAGACCTTGTCCTGTGTGCGGCAGTATTTTTGAGAGCGAAGCGCAGTTTAGCAAGCACATGAAGGAAGTCCACCCTAAACATTCCAAGaCATCTCTCAATGTTAAAGCAAGCAATAATAATGCTCCTAAAGTAAAGCAACATATAAAAcgacagaaaataaaaaaatcaccttcTCCTGTACCTATAAGAAGATCTCTTAGAAAAAGAAGTGTAATTCAACCAGAATATTTGTCGGAGGATGAAGAAGATATTGAGCCTGTAAAGCCAATATTCATTAAGACTGCTAAACGAACTTCACCATTGAAATCTTCAAAATCTACAAAAAAAGAAGTTCCTGCCTTGTCATCGTCAGAAGACACAAATGTTGATGAAGATGAGCCATATGTTCCTAATGACAGGCCTGAACCTAAGAACTCGGCCTATAAGTGTAAATTATGCTCTAAAGGCTATGAATCAAAAAGTGGACGTAGAAATCATTATGTTGCAACACATGATAAACATGAGTGTAAAGTGTGTGAAGAATTATTCCTTACTGCTTCAGAAGCAGAACAACATGAAAAACAACcccataaaattttatgtaatcaaTGTCCTGAATATTTTCAATCACAATCATCATTAAAAATGCACATATCAAGTAAACATTTAGAAGGACCAAAACAGTACAAATGTTCACAGTGTAATAGAGATTATGTTTCCAAATCAGCATTAATGACACatgaaaaattacataaaattaaagaacCAAGTGTTTGTGATGTGTGTAATAAGTGCTGTAAAACACCAACagctttaaaatatcataaatttgtaCATATGACAGATGAAGAGAAGGCTAAAGTTGGCTTTTCTTGTACTATGTGTGACAAAAAGTTTCCTGGTAAAACTCGTTTAACCTTACATATGAGACGTCATACTAATGAACGACCATGTGAGTGTCCGACTTGTCATAAAACATTCCATGATTCAGAAAGATTAAAAGCACATATGGAAGGACATAGCACAGAAAAGAGATTTAAATGTGATCAGTGTGAAGCATGTTTTGTCAGTAAACGTTACTTAGTTAATCATATGTATCTTTCTCATAGGAGAAAACAAGTGATTAGGTGTATAGTTTGTAAAACTGTATTTCCTAGTATGAAAGATGTTATGATACATCAAAAAACACACACAGCTGAGgaattagaacaaaataatgCAACTCCAGAAGAACCTTTTACAAAATCAATAGAATTTCATTGCAAAGAGtgtaatgaatatttttctaaaaaagatTTATTGAGAATTCATAAAGCTAGGTATCATGCTAAAGAACGAGTACCAAATAAAATTAGTGCTCCAATTAAACAGTTAGATTGTAAAATATGTGGAAAGAAAGTATGGGGAACTGCCGGTTTAAGCAGGCACATGAGAGTTCACTCAGGAGATGCTCCAGCTCGTACTTTCCAATGTGAGTTCTGTGCCAAGTTGTTTGCACAGAAGATGCAAATGGTTCTCCACATCAGAACCCACACCGGGGAAAAACCTTTTCGATGTCAGTTTTGTGACAAAGGATTCATCAACGTCAACAGTCTGGTAGTTCATGAGAGAATACACACGGGAGAAAACCCTTTCCAATGTAATAAATGTCCTAAGGCATTCCGCAGCAACAGTAATCTTGTGGCTCACTTACAGACTCACTCTGATGTCAAGCCATATGAGTGTCACTATTGCCACAAGAGATTTGGTCGTCTTATACATCTGAAGCTTCACTTGCGCACTCATACAGGTGAACGTCCCTATGTTTGTGATATCTGTGGGAGAGCCTTCACTCAAGGTGGGGACATGCGTAAACATCGTCTCACACACACCGGTCAGCGAGCGTACAAATGTGACTCGTGTGATTTCTCAAGTAATAAGAGAAAAACTTTGATGGAACATCAATCTTCCTCACATCCTGAAATTAGAGTTCTGTTACCAACATTGCCACCACAACCGTTACCTGAGTTACATCATCATAATCCTAACCCTATTATTGTACATACACCACAATATCACCCTCCTCCACCTCCACCTTTACCTCCAGCTATCCATCCTACAAGTTCtgcttatttaaaaatgtatgagAACTGGAGTGAAAATTAG
Protein Sequence: MNPTRSNIGSVCTVLNCRNRHGHLKADSTSDHVRYYCFPTDTYFRNLWIQRCAQPGNWNPDVCKVCSIHFCEEDYERDIKSEQLNLPRKWVLKQNAVPTLHLDNTNNVSAQQLQTRNLHEEHSVDEQLLRPSDFLAVSVKEETMEENERLVPSIQAPPRVKQLCRVCAGASKVMLHIFEGQGKQKFLAEKIQRFLYIEVCEDDRLPVQVCETCVSALDACDELAQRCLQAEATLRRLLQEEDKAGLEWEIQCEADNSTCSIDNMGGSSPIWNKDTSTDPAISRQSNEKQEDKTSHLQKGNCKLKEMHLETETIPLAERLARLKNQNSNNTSAKQFSCWECGANLEDLGNFIEHQKSVHSRELRPCPVCGSIFESEAQFSKHMKEVHPKHSKTSLNVKASNNNAPKVKQHIKRQKIKKSPSPVPIRRSLRKRSVIQPEYLSEDEEDIEPVKPIFIKTAKRTSPLKSSKSTKKEVPALSSSEDTNVDEDEPYVPNDRPEPKNSAYKCKLCSKGYESKSGRRNHYVATHDKHECKVCEELFLTASEAEQHEKQPHKILCNQCPEYFQSQSSLKMHISSKHLEGPKQYKCSQCNRDYVSKSALMTHEKLHKIKEPSVCDVCNKCCKTPTALKYHKFVHMTDEEKAKVGFSCTMCDKKFPGKTRLTLHMRRHTNERPCECPTCHKTFHDSERLKAHMEGHSTEKRFKCDQCEACFVSKRYLVNHMYLSHRRKQVIRCIVCKTVFPSMKDVMIHQKTHTAEELEQNNATPEEPFTKSIEFHCKECNEYFSKKDLLRIHKARYHAKERVPNKISAPIKQLDCKICGKKVWGTAGLSRHMRVHSGDAPARTFQCEFCAKLFAQKMQMVLHIRTHTGEKPFRCQFCDKGFINVNSLVVHERIHTGENPFQCNKCPKAFRSNSNLVAHLQTHSDVKPYECHYCHKRFGRLIHLKLHLRTHTGERPYVCDICGRAFTQGGDMRKHRLTHTGQRAYKCDSCDFSSNKRKTLMEHQSSSHPEIRVLLPTLPPQPLPELHHHNPNPIIVHTPQYHPPPPPPLPPAIHPTSSAYLKMYENWSEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -