Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: ZIPIC
Assembly: GCA_949318235.1
Location: OX439129.1:25171149-25172957[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.074 5.2 8.1 2.8 1 23 2 25 2 25 0.94

2 17 0.027 1.9 9.4 1.9 1 19 90 108 90 114 0.93

3 17 0.0025 0.18 12.7 0.8 3 23 122 143 120 143 0.94

4 17 0.0027 0.19 12.6 1.6 1 23 149 171 149 171 0.97

5 17 5.2e-05 0.0037 18.0 0.8 1 23 177 199 177 199 0.98

6 17 6.8e-06 0.00048 20.8 2.7 1 23 205 227 205 227 0.96

7 17 0.0046 0.32 11.9 2.0 3 23 238 258 237 258 0.99

8 17 5.4e-05 0.0038 17.9 2.1 1 23 264 286 264 286 0.96

9 17 5e-06 0.00035 21.2 2.9 1 23 291 313 291 313 0.99

10 17 0.00068 0.048 14.5 0.5 1 23 319 341 319 341 0.99

11 17 5.6e-05 0.0039 17.9 1.1 1 23 366 388 366 388 0.99

12 17 6.1e-06 0.00043 20.9 1.4 1 23 394 416 394 416 0.98

13 17 0.12 8.7 7.4 0.3 1 23 422 444 422 444 0.94

14 17 0.00061 0.043 14.6 0.7 1 23 450 472 450 472 0.97

15 17 5.3e-06 0.00037 21.1 4.5 1 23 478 500 478 500 0.98

16 17 3.8e-07 2.7e-05 24.7 0.5 1 23 506 528 506 528 0.99

17 17 0.0055 0.39 11.6 4.0 1 23 534 556 534 556 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.074	5.2	8.1	2.8	1	23	2	25	2	25	0.94
2	17	0.027	1.9	9.4	1.9	1	19	90	108	90	114	0.93
3	17	0.0025	0.18	12.7	0.8	3	23	122	143	120	143	0.94
4	17	0.0027	0.19	12.6	1.6	1	23	149	171	149	171	0.97
5	17	5.2e-05	0.0037	18.0	0.8	1	23	177	199	177	199	0.98
6	17	6.8e-06	0.00048	20.8	2.7	1	23	205	227	205	227	0.96
7	17	0.0046	0.32	11.9	2.0	3	23	238	258	237	258	0.99
8	17	5.4e-05	0.0038	17.9	2.1	1	23	264	286	264	286	0.96
9	17	5e-06	0.00035	21.2	2.9	1	23	291	313	291	313	0.99
10	17	0.00068	0.048	14.5	0.5	1	23	319	341	319	341	0.99
11	17	5.6e-05	0.0039	17.9	1.1	1	23	366	388	366	388	0.99
12	17	6.1e-06	0.00043	20.9	1.4	1	23	394	416	394	416	0.98
13	17	0.12	8.7	7.4	0.3	1	23	422	444	422	444	0.94
14	17	0.00061	0.043	14.6	0.7	1	23	450	472	450	472	0.97
15	17	5.3e-06	0.00037	21.1	4.5	1	23	478	500	478	500	0.98
16	17	3.8e-07	2.7e-05	24.7	0.5	1	23	506	528	506	528	0.99
17	17	0.0055	0.39	11.6	4.0	1	23	534	556	534	556	0.94

Sequence Information

Coding Sequence: ATGTATCATTGTAATTCTTGCAACAGCTTCTATGATTCTAATGAACAGCTTCAGCAACATAGATTAGAGCAACATCCTTCAGAAACAAGTGATAACGTAAAAATAACAAACGTTGCTGAAATTCAGTTATTGAATTCTAATAAACTGACCTCTAATTCTAATTTATGTATGAAAGTATCAAAAGATTTTGATAAAATGGACAAATCTTTAAGATCTAAAATTGTTGGTGCAATTCAAGATATAGTTCTTCaagatcaaaatataaaataccagTGTGAAGTCTGTAGAGACAATTTCAATACAAAAGAAGCATTAAATAGGCATTGTAGAGAAATGCAACATAAAGTAACCAGACCTGTGAATTGCAGTTTATGTAAACAATCATTCAAAAGTTACATCGATTTACAGGAACACAAACTTTCATCACATGATGATTTAAAGTCTTTTACATGTAATTATTGTGAAATGAAATTCCTTACCAAACGAATGTTATTACGTCACATCTCTGAACATTCTGAATACAAAGCTTTTACTTGCAGTACTTGTGGTAAAGGGTACAACAGTAAAACTGGTTTTGAAATACATCTTTCTACTCATAATACTGAAAAACCTTATCTATGTGACTTGTGTGGGAAAAGTTTTAAGCATGTGAGTAACTTGAAAGGACATAAAAGATCACATTTATCTGAAGAAGATAAAAAGAGACATGGATGTCCTTATTGTGAGAAGAGATTCCGTTGCAAGTTTTTAGTGGAAGAGCACATGAGAATGCACACTGGCGAGCGACCTTTTGCGTGTGATATTTGcaataaaagattttataaaagGCAGCAGCTGAAGCAACATAAATTGGTGCATTCAAATGATAGTTATGAATGTCACATTTGTAATTCTCGTTTTAATCGCAGAGGCAATTTGACAGAGCATATTAAGAAACACATGACTCTAAGACGATACACTTGTAAGGTATGCAAAGATGGATTTGAAACTATCAGTCAACTTGTTGCACATAGAAAAACTCATACTACTGAGGAAATAGCGCAAAGCAAATTGATATACGAAGCTATGAATGCTGCTGAAATTGGATCCACTAGTTATCGGTGCCATGTCTGCAATAAAATTTTGGCTACAAAATTATCACTTGAATCTCATCTTAGAATTCACACAGGTGAAAAACCATTTGAGTGTGAATTTTGTGGACAGAGATTTTCACAAAAACCAGCCTTGACTTACCATCGCCGACGGCACACAGGTGAGAAACCTTTTGTTTGTAGTTATTGCAATGAAGGTTTCCTATCTCGAAATGCCAAAAACATACACGAACGCATTCATACTGGAGAAAAACCATATTCATGCTATGTATGTGGTACTGCATTCCGATGTGCCAGTAGTTTGACTCAACATCTCGCAGTACACAGTGATCAACGTCCATTCTCTTGTCCTCATTGCAGCAAATGTTTCAGAAGGCGAGAAGCAATGCAAATACATCTTAGAATTCATACCGGTGAAAAACCCTATACTTGCGAAGTTTGTGGACGAGCATTCACTCAAAGAGGTGATATGGTGAAGCACAGACGTACTCATGCCAATGATAAGCCACATGAATGTAAACATTGTGATTTTATTACTACCTCTCGAAAAGAACTCAAGAAGCATGAAGCATTACACCAAATTGATAGCGATTCAATATTAATTGCTTCTGAAAACTTAATCACAACTTTCCCTGAAATAACTATTGTTGGCCAAGAATGTGAAATGATTTTAGAAGATGGAGGAGACATTGAGGATCAAATCAACCAAGTTGTTTAA
Protein Sequence: MYHCNSCNSFYDSNEQLQQHRLEQHPSETSDNVKITNVAEIQLLNSNKLTSNSNLCMKVSKDFDKMDKSLRSKIVGAIQDIVLQDQNIKYQCEVCRDNFNTKEALNRHCREMQHKVTRPVNCSLCKQSFKSYIDLQEHKLSSHDDLKSFTCNYCEMKFLTKRMLLRHISEHSEYKAFTCSTCGKGYNSKTGFEIHLSTHNTEKPYLCDLCGKSFKHVSNLKGHKRSHLSEEDKKRHGCPYCEKRFRCKFLVEEHMRMHTGERPFACDICNKRFYKRQQLKQHKLVHSNDSYECHICNSRFNRRGNLTEHIKKHMTLRRYTCKVCKDGFETISQLVAHRKTHTTEEIAQSKLIYEAMNAAEIGSTSYRCHVCNKILATKLSLESHLRIHTGEKPFECEFCGQRFSQKPALTYHRRRHTGEKPFVCSYCNEGFLSRNAKNIHERIHTGEKPYSCYVCGTAFRCASSLTQHLAVHSDQRPFSCPHCSKCFRRREAMQIHLRIHTGEKPYTCEVCGRAFTQRGDMVKHRRTHANDKPHECKHCDFITTSRKELKKHEALHQIDSDSILIASENLITTFPEITIVGQECEMILEDGGDIEDQINQVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -