Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: su(Hw)
Assembly: GCA_949318235.1
Location: OX439133.1:2237724-2260325[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00015 0.01 16.6 0.6 2 21 96 115 95 116 0.95

2 13 3.1e-06 0.00022 21.8 1.4 1 23 217 240 217 240 0.98

3 13 6.3e-06 0.00045 20.9 0.5 1 23 246 268 246 268 0.99

4 13 5.6e-06 0.00039 21.0 1.9 1 20 274 293 274 294 0.96

5 13 2.1e-07 1.5e-05 25.5 1.1 1 23 306 328 306 328 0.97

6 13 0.0002 0.014 16.1 2.2 1 23 338 360 338 360 0.99

7 13 1.8e-05 0.0013 19.4 0.7 1 23 366 388 366 388 0.99

8 13 2.5e-05 0.0018 19.0 1.2 1 23 394 416 394 416 0.99

9 13 6e-06 0.00042 20.9 3.4 1 23 422 444 422 444 0.95

10 13 0.003 0.21 12.4 4.3 1 23 450 473 450 473 0.96

11 13 4.1e-06 0.00029 21.5 0.5 1 23 479 501 479 501 0.96

12 13 2.8e-06 0.0002 22.0 1.3 1 23 507 529 507 529 0.98

13 13 2.1e-06 0.00015 22.4 1.9 2 23 536 558 536 558 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00015	0.01	16.6	0.6	2	21	96	115	95	116	0.95
2	13	3.1e-06	0.00022	21.8	1.4	1	23	217	240	217	240	0.98
3	13	6.3e-06	0.00045	20.9	0.5	1	23	246	268	246	268	0.99
4	13	5.6e-06	0.00039	21.0	1.9	1	20	274	293	274	294	0.96
5	13	2.1e-07	1.5e-05	25.5	1.1	1	23	306	328	306	328	0.97
6	13	0.0002	0.014	16.1	2.2	1	23	338	360	338	360	0.99
7	13	1.8e-05	0.0013	19.4	0.7	1	23	366	388	366	388	0.99
8	13	2.5e-05	0.0018	19.0	1.2	1	23	394	416	394	416	0.99
9	13	6e-06	0.00042	20.9	3.4	1	23	422	444	422	444	0.95
10	13	0.003	0.21	12.4	4.3	1	23	450	473	450	473	0.96
11	13	4.1e-06	0.00029	21.5	0.5	1	23	479	501	479	501	0.96
12	13	2.8e-06	0.0002	22.0	1.3	1	23	507	529	507	529	0.98
13	13	2.1e-06	0.00015	22.4	1.9	2	23	536	558	536	558	0.96

Sequence Information

Coding Sequence: ATGGCTGACaaagGAACCCCAACTAAAAGGGCAACTCGAACTTCTGCTCGAAACAAagGAGAAAGTCCTGGAGCAAATGGATTTGACCTTGATCTTGAGTTAGAGGTCACCTCTCCAAAAAACACTCCTAGCAAAAATgTCAAGGTCGAGTCACCGGGGTCAAAGGTCAAAGGCAGAGGTCGTAAGAAGGGCAAGAAGAAGGAGGATGAGAATGAAGTTCAGGAAGAAGTTGTTGAGAGAGGCGAATCTCCTGCCGAGCCAGTCGTTACGTTGGACTCTGGTATCACCTGCGAGCAATGCAAGCGAACCTTCGGAAACTCATCTGGCTACAAACGCCACATTCGTTTCTGCACTGGCTTGCTGGCAGAGGAAGAAGATTTTGACCTGGACAATCCTGATGATCCTGTGGCTAGTACGTCCAAGACCACTGCGCCTGCGACCACCAAGCCCAAGGGAAAGCCTAGGGGCAAGTCTATGGCCATCAAAACTGACTCAGCTGCCCAGACTTCCAATAATCTGAGGGAGAAAATGAAAGGGGTCATGCTGACCAAGGTCAATGAACTGATTGATGAGACGACGGCTGCTGCGGCTGCAGGCAAATGTCATTGTTGTGGAGAAGATCTCGACACTGCTCATATGGGAGGTGACTTCCGCTGCGACGACTGCAACAAGTTGTTcaaactaaagtcaagtttggAGCGTCATCGTCGCGTCATCCATATGGAGGGAGAGACGTACCAGTGTCCTGAGTGTGACGCGAGGTGTCCTGACAAGGGAACTTTAGCCAGGCATATGTACACACATACAGGTCTCAAGCCATACACTTGCAACCGCTGTGACAAGCAGTTCAGTCGCAAGTATCACTTGGAGCGTCACGTCGTGCAGACTGGATGTGACGGCAAGCCTAAGCCTACGCACCCCTGTCAGGTGTGTGGCCGTATGTTCAGCCGCAAGGACAACTTGCGTGAGCACCTGAGAGCCCACGCTGGCCAGGTCAAGAGGAAGAAGAAATATCAGTGCGAGTTTTGTCAGAAAGAATTCCACGGCACGTCCTTGCTGCAGATCCACGTCCGTACACACACTGGTGAGCGTCCCTACACGTGCGACTTCTGTGAGAAAGGGTTCCCCTCCAGTGGAGCCATGAAGAAGCACCGTCGCATGCACACCGGAGAACGTCCCTACGAGTGCAAGGAATGTTTTGCCAAGTTCAGCGCCAAGGAGACGTTGAACCGTCATATTAAGACGCACACTGGCGTCAAGCCTCATATCTGCCAGTACTGTGGCAAGAGCTTCATCCAGGCTAGTCAGCTTAGAAGTCATATCTTTCATCATACTGgtGAGAATGGCTACACGTGTGTCCACTGTAACAAGGCGTTCAACCGTCGTGTACGTCTGCATATGCACGTCAAGTACGTTCACGAGGGAGCCAAGCCGTTTGAATGTGACATGTGTACTAAGACCTTTGTACGTAAAGAGGACCTGGCGAGACATACCATTTTACATTCTGGCATCAAGTCACACAAATGCCCTATCTGCGAGAAACAGTTCGCTATGAAGTCCTCCCTCAAGATCCACTTGCTGACTCACACCAAGGAGCCTCCTCGCTCGTGCGACGAGTGTGGACGTGCTTTCATCCGCCAGGACTGCCTGCTGCGACACATGCGCTCCAAGCATCGCGACATGTTGGAGGAGATCTTGGCGGAGGCTGAGAAGAAGAAGTTACAGCAGCAGTTGCTGGCGGCCACTGCTCAGGCAGCAGCTAATACTGCGGGAGCAGCCGCGGCAGCAGAAATGATGTCGCTGGCAGGGCCCTCTCACCTGGGTCTAGGCCTAGGACCCTCTCTCGCCGCAGGCTCCACTGCAATGGGAGAAAGTGCTCTCGCTGACTCTATACGTGAACTGCTGACGTTACTCGTTGACGAGGCGACTTTACGTGCGTTCGGCTGGCCTGAAGAACCAGTGGACAAACTTCTGGAGTCCGTGATCAAGCGCTGCGGACACCAGCCTGTCTCTGACGAAGATTACGCGTACACGGACAGATTGAGAGAGAACGCTAAGTTGTTGTTCACCGTCGTGATCGACGACTCAGCAGTCAAGACGTTGCTAAATAACCAAACTGTCGACGAAGTCATCTTGCATGTGTTACGTTTGGCCAAGAGTTAA
Protein Sequence: MADKGTPTKRATRTSARNKGESPGANGFDLDLELEVTSPKNTPSKNVKVESPGSKVKGRGRKKGKKKEDENEVQEEVVERGESPAEPVVTLDSGITCEQCKRTFGNSSGYKRHIRFCTGLLAEEEDFDLDNPDDPVASTSKTTAPATTKPKGKPRGKSMAIKTDSAAQTSNNLREKMKGVMLTKVNELIDETTAAAAAGKCHCCGEDLDTAHMGGDFRCDDCNKLFKLKSSLERHRRVIHMEGETYQCPECDARCPDKGTLARHMYTHTGLKPYTCNRCDKQFSRKYHLERHVVQTGCDGKPKPTHPCQVCGRMFSRKDNLREHLRAHAGQVKRKKKYQCEFCQKEFHGTSLLQIHVRTHTGERPYTCDFCEKGFPSSGAMKKHRRMHTGERPYECKECFAKFSAKETLNRHIKTHTGVKPHICQYCGKSFIQASQLRSHIFHHTGENGYTCVHCNKAFNRRVRLHMHVKYVHEGAKPFECDMCTKTFVRKEDLARHTILHSGIKSHKCPICEKQFAMKSSLKIHLLTHTKEPPRSCDECGRAFIRQDCLLRHMRSKHRDMLEEILAEAEKKKLQQQLLAATAQAAANTAGAAAAAEMMSLAGPSHLGLGLGPSLAAGSTAMGESALADSIRELLTLLVDEATLRAFGWPEEPVDKLLESVIKRCGHQPVSDEDYAYTDRLRENAKLLFTVVIDDSAVKTLLNNQTVDEVILHVLRLAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -