Basic Information

Gene Symbol
Trerf1
Assembly
GCA_949318235.1
Location
OX439129.1:40373271-40444550[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-10 7.8e-07 29.5 0.1 3 46 1221 1264 1219 1264 0.96

Sequence Information

Coding Sequence
ATGTATAGTGGAGGAGGCTCGGGGGATGGAGGAGGGGGTGGTGGGAGTAGTGGGAGTGGATCACGTGATGGGGTGGTGACACTTCAATTACGTGAAGCAGAAGATGAAGACGAAGAAGATGAAAAAGCGGCTGCTGGAGGTGCTACTGAAAATGGTAACCTGGCTTCAGTATTAGCTAGACTACAACAAGAAGATGCTACACTAAGTATTAGTTACCAAGATGGAGAAATGTTGGCAGAAGGAAGTATTGATGTCCTACTTGGCTCCAGTGCCTTGCATTCGTCAGGTGGTGGCGGTGCATTTGACCTTTTCGACTCTGAGAGTGGTCAGGATTTAACCCTCAGCCCGCAGACCTTCACGAGTTCTACCGAGGCTTTCCTCAATGATAATTCAGACTCGTTGCCTGGTGCTCCAGGAGACAATGATACCGTAGGAAGCTCGGAGGAAGTGAAAACAGCGACAACGGCAATTGTAGCAGCAGATTCCGGTAAACTTGCAGTGAAAAAGTCCCGACCCAAAGCGTGCTCTCCAAATCGTCAGGGACCACAGCAATGTcaaGTGTGTGGGAAGGTGTTCGGCAATGCATCTGCACTGGCCAAACATAAGTTGACGCACAGTGACGAGCGCAAATATGTATGCAGCATGTGCGGCAAGGCATTCAAGAGGCAGGACCACTTGAATGGTCACATGTTAACACATCGAAATAAGAAACCATTCGAGTGCAAAGCTGAGGGTTGTGGTAAGAGTTATTGCGACGCCAGATCTTTGCGACGCCACACAGAGAATCATCATACCACCCCGGCATCCTCGACCAGCTCAGGGTCAAGCCGCAGTGCTACCACCGAGGACCCACCCTCTTGTATTCAGTATGCACCGCCACCCCCACCTTACCCTGCAACAGCATCCTCACCTCCCGCTGCCGCGGCATCGCCCAGTCAACTGCAGCAACTGCTGTCATCTCCCGCAGCTGCTGGCACCGCGCAGTCTCCCAGCAGCCCCACTACCTCAAACCAGGCTTCGAGTCCGGGCGCGGACAGCGGTGCAAGTGATGGTCTCACTCGTCAGCAACTCGAGTTGATCCAACAGATCATGCAACAGACTCAGCAacaagcagcagcagcagcggcATCAAAAGCAGCAGAGAAAACCTCCAAGGGCCGTTCGTGGTCAGGATCACAGAGTGCTAAGGCTGCGGCATCAGCAGCCAACGCGGCAGGCACCGGTGCTAAGCAAGCTGACCCCAAGCCAGTTGAGTGTAACCTGTGTCACCGCAAGTTCAAGAATATCCCCGCCCTGAACGGGCACATGCGCTTGCACGGTGGTTACTTCAAGAAAGATTCCGAGGCTAAGAAAACAGATAAGAAGGATTCTGGAGGTCCTCCTTTGCAGACTGCGAGTGTGAGCGTGCGAGCGCTCATTGAAGAGAAAATTATCCAAAAACGCATCACAAATCCCGCGCTGGCGGCGCAAGTGGCGCAACATCAGGCCAGCCACGCGCTGCACCAGGCGCAGGCACAGCCCTTTCAACAACAGGGCGCAACTGCCACTGCGCAACAAAACAACGGTACAAGCAGCACAACAGATTCAACCACATTCCCCGGTCAAGCACCTCCACAGTATCCTGGTACTTCcccaaataataacaatacgaGTGCGAAAGCTGCATTTGCAGTTCCTGCTGCTCCCTCACCGGTTCCTCCGGTTGAGAAGACACGACGTCACTCAGACTCCGAGCATTTCGCTCCTCCGCCTCGAGCACCTGCTGTGGAGACAAATAACGTGAAGCGAGTTCAGAGGACAGGATCTGACCCAGGTACCGCGGTGGGCAGTCCTCTAGCTCTGGCGCTTGCAGCAGAATTAGCCGCCGCAGAACAGGCGGGGGCAGGAGCCAACTCATTTGGTTTGGCAGCAGCATTTGCTGGAACAAATACTGGAACAGGGTTCTTCCCTCAAGATGACGTGTTCCAACAAGTTCCAGAAGCTGTTTTACAGCTTGCTGAATCCATCCAGGCCGAGGACATGGCCGCTCTCGAGGATTTCCACGAAGCTGCCGAAAGTCCTGCTGGCAGCGCTGCTTTTACAGGAACTGGAGCTGGGGACGCCGGGGGTGGTGCTGACTACCCACCCCTGCAGTCAGTTACCCTGGCTGACCTAGCAGCTTTCTCAGCCGCAGCAGCAGCGGCCGCACACAAAGACACAACTGTATACGCTTACTCACCACATCACAAGGAGTCTGCAACTGTGTATGCTTACTCCCCTCAGCAGCAAAATTCAAAGGACGCTACGAGTGCTGGTTACACGTTCTCGCCTCATACGGCGTCTCCTCTACCTTCGCCATTGCAAGCTCATGATTCACCAGGGTTCGCCTACCCTACACCCCCTGCCAGCCAAGAGGGACCTTCATTTGGACTTCTCCAACAGGCACCACTTGGATCTCCACACGCCTCGGCAGCAGACTCGACTTTCACGTTTTATGCGGGCGCTCTCTCGCCCTCTGCCGCAGCAGTGGAAGCCGCTCTCAGCGAGGTCTTGCCTGGAGAAATGACCCGCTCTCATCACACGCTACTATATCACTCAGCACCAGCTGCACCATCACCACCTCCGAGTGGAACGGTTAACTCCCCTCTCTCAGCCACCCCCGTGCCCTCCCCTCTTTCAAGTGTTCCAGCATCCTCATCTTCAGCCCCTTCTCCATTACCACCTACCTCAGCTGCTAATGCACAATACTCATTACAAAATCAAATGATGCCAAATTCAGATGACCCATTATTATCAAGTTCACCAAAAGATTTTGGTGGACGTAAAAGATTTGATTTTGGTGTATTTCGTGGTACAGATGTAGCTGCTACTGGTGCTGCATTACATAGTTTAGGTTTAGTGGTGGATAGCAGTGGAGAATTGAGATTTTACCCCAGCTCTGGAGCTGCTAGTCCGGCAGTGACGTCTACTACAAATCAGCCACAACAAAGACATACTCACGCTCCACGTGGCAGTCTGGGAGCTGTACAAGAACAAGAGGATGATGTATTCCTCAGCCCCACCAGTGTACCAGCAAGTCCAGTACCGCGACTCAAGCGACCACGTACGCGTCCAGAGCCTCTTTATATCCCTCATCATCCACCACCAGGTCCAGCTATCTACCCCTCTCGTATGAGACCTGCTCGATTGCGACCTTGTGCAGGGGCTGGGGGAGGTCAGCCATGTGTAAGCGCACACTACACTCCTCCTCCAATGTTGGATCCTGCACGTAATGGAACTGGACTATTCAACAACTTTCAGCTTAAGAATGAGCCAAATAGCAGCGCTTCGCAGGAAGAAAATATTACAGAAGTGACCCCTCATACTAACGTGGGCTCTGCTCATCAGGTGACTTGTATACCAATGTGCGAGTCACGTAAGGAGATAGCACAATTGGAACCAATTCGCGAGCACGTGTTATGGGACCCAGGTCTGAGTGCTACCGATAGTGAAGTTGATATGTACCTGGAGTTCGCGTGCTGCGCCGCGGTACCAGGAGGTGGCAGAAACAAAGAGTATGCCATGCATCTCTTGCATATGTGCCAAGGAAATATACATGAGGCTATGTTGCGGCTCATGCAGCCCACCCCCTTACTACCCCCTAACCACCCCCTGCTCAGCTACTGTTACTCAGACAGTGCTCGCTGGGCAGCGGATGAAGTTGAGGCGTTCCAGCAGGCTCTGATTCGCCACGGCAAGGAATTCCGCAACGTCTCGAAAGAggtGGGCACCAAAACTGCAGCGCAGTGCGTTCAGTTCTACTATCTCTGGAAGAAAGTTTGTCCTGAAGAATATCAGCGGTTACGATTGCTTCGTCAACGTCCAGATCTCTGCCTATTACGTGGTATTGATTTGGATGAATTAGCAAATGAGAGGCTGGCCTTCcaggCGAGCGATGCTGAAGTGATTACCAGCACATGCACAGCTGATACACGACTCTTCATGTGCGAGTATCCCGACTGTTCTGCTAGTTTCAACTCACGTGCTGCTCTAAATGGACATGTACGTATTCACGGTGGTGGTGGACGTAGATCTCCAACTCCTGATGGCTGCCGAGGACGACCCATGTCTGGTACTCCACCAATAGAAGGTGGCGAGGAGTTTCCATGCAAAGTGTGCGGGAAggtATTCGGCAAGGTGAAAAGTCGTAGTGCTCATATGAAATCTCACCGACCACCAGATGCTGAACCTAAGAGGCCAAAATCTGATTCTAATcaacagcaacaacagcaacaacagcagcagcagcagcaacaacaacaacagcaacagcagcagcagcaacaacaacaacaagcaGCGGCTCCTGCTCAACCTCCAACCCCACAAACTCCTCAATCTCAACAACGTGAGGATTGTGTACGACCACCAAGTTTGTTATCTACACAAATGCAACAACAGACCACAGGCCTCGGACTTATGTAG
Protein Sequence
MYSGGGSGDGGGGGGSSGSGSRDGVVTLQLREAEDEDEEDEKAAAGGATENGNLASVLARLQQEDATLSISYQDGEMLAEGSIDVLLGSSALHSSGGGGAFDLFDSESGQDLTLSPQTFTSSTEAFLNDNSDSLPGAPGDNDTVGSSEEVKTATTAIVAADSGKLAVKKSRPKACSPNRQGPQQCQVCGKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPFECKAEGCGKSYCDARSLRRHTENHHTTPASSTSSGSSRSATTEDPPSCIQYAPPPPPYPATASSPPAAAASPSQLQQLLSSPAAAGTAQSPSSPTTSNQASSPGADSGASDGLTRQQLELIQQIMQQTQQQAAAAAASKAAEKTSKGRSWSGSQSAKAAASAANAAGTGAKQADPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKTDKKDSGGPPLQTASVSVRALIEEKIIQKRITNPALAAQVAQHQASHALHQAQAQPFQQQGATATAQQNNGTSSTTDSTTFPGQAPPQYPGTSPNNNNTSAKAAFAVPAAPSPVPPVEKTRRHSDSEHFAPPPRAPAVETNNVKRVQRTGSDPGTAVGSPLALALAAELAAAEQAGAGANSFGLAAAFAGTNTGTGFFPQDDVFQQVPEAVLQLAESIQAEDMAALEDFHEAAESPAGSAAFTGTGAGDAGGGADYPPLQSVTLADLAAFSAAAAAAAHKDTTVYAYSPHHKESATVYAYSPQQQNSKDATSAGYTFSPHTASPLPSPLQAHDSPGFAYPTPPASQEGPSFGLLQQAPLGSPHASAADSTFTFYAGALSPSAAAVEAALSEVLPGEMTRSHHTLLYHSAPAAPSPPPSGTVNSPLSATPVPSPLSSVPASSSSAPSPLPPTSAANAQYSLQNQMMPNSDDPLLSSSPKDFGGRKRFDFGVFRGTDVAATGAALHSLGLVVDSSGELRFYPSSGAASPAVTSTTNQPQQRHTHAPRGSLGAVQEQEDDVFLSPTSVPASPVPRLKRPRTRPEPLYIPHHPPPGPAIYPSRMRPARLRPCAGAGGGQPCVSAHYTPPPMLDPARNGTGLFNNFQLKNEPNSSASQEENITEVTPHTNVGSAHQVTCIPMCESRKEIAQLEPIREHVLWDPGLSATDSEVDMYLEFACCAAVPGGGRNKEYAMHLLHMCQGNIHEAMLRLMQPTPLLPPNHPLLSYCYSDSARWAADEVEAFQQALIRHGKEFRNVSKEVGTKTAAQCVQFYYLWKKVCPEEYQRLRLLRQRPDLCLLRGIDLDELANERLAFQASDAEVITSTCTADTRLFMCEYPDCSASFNSRAALNGHVRIHGGGGRRSPTPDGCRGRPMSGTPPIEGGEEFPCKVCGKVFGKVKSRSAHMKSHRPPDAEPKRPKSDSNQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAPAQPPTPQTPQSQQREDCVRPPSLLSTQMQQQTTGLGLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00630953;
90% Identity
iTF_00630953;
80% Identity
iTF_00630953;