Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_949318235.1
Location
OX439133.1:3664428-3681348[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-14 1.9e-11 44.2 0.2 3 44 605 646 603 648 0.95

Sequence Information

Coding Sequence
ATGATGGCCTTTGCGCCCAAAAAGGACGGCGGTCCGAATGTAAAATTCTACGAGAGTCCTGAAACTATCGCCCAATTTGATGGAGTTCGTACCTGGTTGATGAAAAATgccaaaaaaTACGTGCAGACAGATCCTCCTACCAACAAGTCGTTGTCTTCGTTGGTGATACAACTGATACAGTTCCAGGAAGATAACCTGGGCAAGAATGTCAGCAAACCTCCACTCACCAGGCTGCCTATGCGATGTTTCCTGGACTTCAAGCCCGGTGGTTCCCTATGCCACATCCTGGCCACTGTGTATAAGTTCCGTAGTGACCAGGGCTGGCGTAGATTTGATTTCCAGGTGGGTAAATCTCCGTCACGTATGGATCGTAACATTGAGATGTTCATGAGCGTGGAGAAGGTGTTGCTACAGAACAAGTGCTTGACCATGCCCGTGGTCTTCTTACGTCCTGACCTGGACAAGGCAACGCAGACCAAAGTCAAGGAGGCGGTCAAGAAACATCAGGGCACCATCACAGAGAACGAGGAGCAAGCCACCCATGTCATCTACCCCACATGTGACCCCCTGGAGGAAGAATACGCTCGACCTACATTCCGACGTGATCGACTGGTCATGTTACATTGGTACTACTTCCCGGACTCTTATGACTCCTGGACTGCAGCGGACTTGCCTGTAGATCCACCGGACTCACCACAACCTAGAGCAGGACCATGGAGAGTCAATGCATCGTGGGTCAACGAACTAGATGAGTACAACGAGTGGATGACGGAAGAAGATTACGAAGTGGACGAGGGTGGCAAGAAGAAAGTGCACAAGCTTCGACTGTCAGTGGAAGATCTAATGAACCAAGGTGACCCTGAACGCACCAAGAAGAAGCCCAAGAGGAAGAGGTCGCCGTCACCACCTCCTAAACCTGCCAAGCGTAAGAGTGGTCGAGGCCCCGGGGTAGGCGGAGGCAAGAAGCATCGTGCAGAAGACGAGGACGACGAAGCCAGCAAGGACACTGAGGACGCCTCCATGGGAGAGACGTCAATCATACAAGAAGTATCGCTGAAGCCTGCAGCCACGCCCACCTCTAACCTGCCCTCTGCCTCGCGTGGCAAGGACTCTGAACTACAACCTCTCAAGGGAGGAACTTTGACAGAGCTGGAGGAGGAGGGGGAAAAGGGGGAGGACTCACAGACTGGACGTGCCTCCGACGTAACAACTCAGGAGGTGAAGGACGAGAGCCAAGAGGACAACGTGACAGAACAAACCCACCACATCGTCATCCCCAGCTACGCTGCATGGTTTGACTACAACGCTATACACACGGTGGAGCGTAGAGCCATGCCTGAGTTCTTCAACGGCAAGAACAGATCAAAGTCACCTGAGATCTACCTGGCTTACAGGAACTTCATGGTTGATACATACAGGTTAAACCCCACTGAGTATTTGACGTCAACTGCGTGCAGACGTAACTTGGCTGGTGACGTGTGCGCCATCATGAGAGTACACGCCTTCTTGGAGCAGTGGGGACTTATCAACTACCAGGTTGACGCAGAGAGCAGACCTACTCCAATGGGACCTCCCCCCACCTCTCACTTCCACGTGCTGGCCGACACCCCAAGTGGCCTCGCACCTGTCAATCCTCCCAAGACACCTCAGCCCTCGGCAGCAAAGACCTTGCTGGACTTGGACAAGAAAGACACCACCAAGATCAAGGCGGAGGGAGAAGAGGCGGTGAACAACAACTTTGGTCTCAAGCTTGACCAGTATACACGTAAGCCTGCTGCTCTACGTAACAAGGCAGCGGCCAGTCAGGCCAGAGAGTGGACAGAACAAGAGACATTGCTCTTGTTGGAGGGACTGGAACTGTACAAGGACGATTGGAACAAGGTATGTGAACACGTCGGCAGTCGTACCCAAGACGAGTGCATCCTTCACTTCTTACGTCTACCTATAGAAGACCCATACCTGGAGGGTACAGAAGATAACGGCTGGCTAGGACCTCTTGCATTCCAACCTATTCCATTCAGTCAGGCAGGCAACCCCATCATGTCCACCGTGGCATTCCTAGCGTCGGTCGTCGACCCTCGTATTGCAGCGTGTGCAGCCAAGGCAGCGATGCAGGAGTTTGCTAACATCAGAGACGAGGTGCCCTCGGCGTTGCTGGACGCACACTTGCAGCGTGTGGCGGCGTCGGGCAAGGACGGCAATTTTGACCCTAGTGCGGGGTTGACGCAAAGCGGTATTGCAGTTGCTGACGTAATCACTAGTAACGCTAATGTGACAGGCACGGCAGCGACGGCCACAGAGAGCTCCACGGAGACAGAGCCTGATAAGAAACCAGAGAGTGAGAGCAAGGAGACGTCCACCGAGGATGATAAGATGGATAAGGAGGCTGAGGAGAAGAAACCTGAGGCGGAGGAGAGCGAGGATAAGAAAGAGGAAACTAAGGAGAAGGAGGAGCCGATGGAAGTAGAGAAGCCTGCCGAGACAGAAGGAGAAAAGCCAAAGGAAGGAGACGCTGACAAACCCAAGGAGGAGGGAGAGAAGGCAGCGGAGGAGAAGCCCGAGGAAGAGAAAGAGGGGGAGAAGCCAGAGAAAGACAAGGTAGTGAAGGACGCTCAGTTGCAGAGTGCCGCCGCAGCAGCGCTGGCAGCGGCAGCAGTCAAGGCCAAGCACCTCGCTGCAGTAGAGGAACGTAAGATCAAGTCTCTAGTGGCGTTGCTGGTGGAGACGCAGATGAAGAAGTTGGAGATCAAGCTACGTCACTTTGAGGAACTGGAGACGACGATGGAGAGAGAGCGTGAGGGGTTGGAGTATCAGCGACAGCAGTTGATTGCAGAGAGACAGCAGTTCCATCTGGAGCAGTTGAAGGCGGCTGAGTTCCGTGCCAGGCAGCAAGCTCACCAGCGAGCAGCTGCAGAACAACAGATGTGGAACCAACAGCAAGCAGCCAGCACGGCACAGACACACAACGCAGCAGCCACTCAGCCTGGGGCTCCAGGGGCTCCTGGTGCCACCTTGGCCTCTCAGACACCTGCCCCAACTCCAGCGGCACAGGTGGCACCTCCCACACGAGAAGACACCCCCAGTTCACCGCAAGCAGTGGCTGTCCCACCCCCCTCCACCCCACAAGCCACCCCCGCCACACCCGCACCCCCAGCTCCCACCCCAGTAGTCGCAGCAGCCCCTACACCTACCCCAGCATCAGTAGTAACCCCTACTCCCACCGCCCCTGCTCCCGCACCTGCGACAGTaccagcagcagcagcagcagcaccTGCGACAGCAGCTCCCATCGTACCCCCCACCTCTCCTGTCGCAGTAGCCTCTCCCATGCCACACGGCGGTGGTATCGTGAACCAGGCACCGACTGCTGTGTCGGCACCGGTGGTTACTCCACCTGTCGTGGTAGGTGCCGTTCGTGCACCGACACCACCTCCTTCTACTGAACCCTAG
Protein Sequence
MMAFAPKKDGGPNVKFYESPETIAQFDGVRTWLMKNAKKYVQTDPPTNKSLSSLVIQLIQFQEDNLGKNVSKPPLTRLPMRCFLDFKPGGSLCHILATVYKFRSDQGWRRFDFQVGKSPSRMDRNIEMFMSVEKVLLQNKCLTMPVVFLRPDLDKATQTKVKEAVKKHQGTITENEEQATHVIYPTCDPLEEEYARPTFRRDRLVMLHWYYFPDSYDSWTAADLPVDPPDSPQPRAGPWRVNASWVNELDEYNEWMTEEDYEVDEGGKKKVHKLRLSVEDLMNQGDPERTKKKPKRKRSPSPPPKPAKRKSGRGPGVGGGKKHRAEDEDDEASKDTEDASMGETSIIQEVSLKPAATPTSNLPSASRGKDSELQPLKGGTLTELEEEGEKGEDSQTGRASDVTTQEVKDESQEDNVTEQTHHIVIPSYAAWFDYNAIHTVERRAMPEFFNGKNRSKSPEIYLAYRNFMVDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLAPVNPPKTPQPSAAKTLLDLDKKDTTKIKAEGEEAVNNNFGLKLDQYTRKPAALRNKAAASQAREWTEQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEGTEDNGWLGPLAFQPIPFSQAGNPIMSTVAFLASVVDPRIAACAAKAAMQEFANIRDEVPSALLDAHLQRVAASGKDGNFDPSAGLTQSGIAVADVITSNANVTGTAATATESSTETEPDKKPESESKETSTEDDKMDKEAEEKKPEAEESEDKKEETKEKEEPMEVEKPAETEGEKPKEGDADKPKEEGEKAAEEKPEEEKEGEKPEKDKVVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIAERQQFHLEQLKAAEFRARQQAHQRAAAEQQMWNQQQAASTAQTHNAAATQPGAPGAPGATLASQTPAPTPAAQVAPPTREDTPSSPQAVAVPPPSTPQATPATPAPPAPTPVVAAAPTPTPASVVTPTPTAPAPAPATVPAAAAAAPATAAPIVPPTSPVAVASPMPHGGGIVNQAPTAVSAPVVTPPVVVGAVRAPTPPPSTEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01347944;
90% Identity
-
80% Identity
-