Etor013109.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- ttk
- Assembly
- GCA_949318235.1
- Location
- OX439132.1:6173992-6182043[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-17 2.1e-14 53.3 0.0 2 42 392 433 391 436 0.95
Sequence Information
- Coding Sequence
- ATGTCTGCTGCAGCCGCACAGCAGTTTTGTTTGAGATGGAACAATCACCAGCCCAATTTTGTATCAGTGTTTAGTTCCCTGTTGAGCAGTCAAGCGCTTACTGATGTCACTTTGGCTGCTGAAGGACAACATTTAGAAGCTCACAGAGTTGTACTTTCAGCTTGCAGTACTTACTTTCAGTCCCTATTTACAACAAATAAGAGCCATCTTCACCCCATTGTTATTCTGAAAGACGTTCAGTTTCGTGATTTGCGTACTATGGTTGATTTTATGTATTCAGGAGAAGTACACGTCTCTCAAGAACAATTACCATCCATTCTCAAGacagcagaaactttaaaaattaaaggtttAGCGGAAGTGCAAGATCTTACTAATATGGATAAACAACAGGAGAAACAACTCTCAACAGAATCTCGTTTGTCTTGTGAAGCTATGGGGGTGTCAGTAGAATCAGCAGCTTGGGGTTCTGAACGTCGCAGTCCCTCTCCTGCCTCGACCTCTGCAGCACAGAGAAGGAAAAGAATGCGTAAAACTTCAACAGGATCCACGTCAGAATCTACTGTTACAGAGCGTACTTCTGAAGAGATGCCTCCCGATGCAAGTTTCACCCACTCCCCACCTCGTTTGGAGCAACAAAGCTCCTCACAAATGACCATGTCTGCTGAAGTTTCTGAGCGAAGTGGGAGCCTGCGGGAACAAACCAGTACTGACTCTGAGATGCATAACTGTTCACAAGATAGTGGAGGACAACCACCCCTCATGGTTCCCGAGGGTGTGAACGTTGAGGTGCAGCATGGAACAGTGGTAGCTCCAGCATCTCGCAGTGTGGAGGATGTTGCTGGTAGTTCTGCAGGTAGTCCACAAGAACCAGCTCCTCATCATCTGCAGCATCATTACCCTTCTACATTGCCGCCAGCCCCTGGATTTCAGTGGGACCATGGTAGTTGTTACTATCCTAGATATCCGCATCCCTCTTGCTCTTTCATAAATACAGCCCCCACTGCCATCCCAGATACCATAGCGTTGCGCCAAACTGTCTCTCCATTTCCTGCGTCAGTACATAAACGTCCCTCCCCTTGTGGACAACTTGGCCCAATACCTTCCCCCACTCCCTCCTCCCCCCCTTCTTCGCCTACAGTACAACGTCGAAAACGAACTGATACACAGCGGGATGAAAATTTTCTACAAGCTCTAGAAGCAGTTCGGAGTGGTGGAATTGGTTTTTGTAAGGCAGCAAGAATGTATGGTGTCAATAACAGAACACTTTGGTTAGAATACAAACGTCGTGGATATCCAATAACAAGACCAAGTTTGAAGCCAAGAGCATCTACTCCTCAAATGTCTTCATATCAATACCCAgctattgttatgaaaaaagaaTCTAACGACTCCAGTTGCAGTAATGATGAAGTTACATTATTACCAACAGCACAAAATAATAGCACAAATGGAAGTAATGCAAATACAAATGCAACACCTAATCCAAATGGCAATGCAAATCCTAATCCAAATCCAGTGCCAAATTACCAAGATTCAAATCCagaaataatgtttttacaaaGTAGTGATATTTTCTGA
- Protein Sequence
- MSAAAAQQFCLRWNNHQPNFVSVFSSLLSSQALTDVTLAAEGQHLEAHRVVLSACSTYFQSLFTTNKSHLHPIVILKDVQFRDLRTMVDFMYSGEVHVSQEQLPSILKTAETLKIKGLAEVQDLTNMDKQQEKQLSTESRLSCEAMGVSVESAAWGSERRSPSPASTSAAQRRKRMRKTSTGSTSESTVTERTSEEMPPDASFTHSPPRLEQQSSSQMTMSAEVSERSGSLREQTSTDSEMHNCSQDSGGQPPLMVPEGVNVEVQHGTVVAPASRSVEDVAGSSAGSPQEPAPHHLQHHYPSTLPPAPGFQWDHGSCYYPRYPHPSCSFINTAPTAIPDTIALRQTVSPFPASVHKRPSPCGQLGPIPSPTPSSPPSSPTVQRRKRTDTQRDENFLQALEAVRSGGIGFCKAARMYGVNNRTLWLEYKRRGYPITRPSLKPRASTPQMSSYQYPAIVMKKESNDSSCSNDEVTLLPTAQNNSTNGSNANTNATPNPNGNANPNPNPVPNYQDSNPEIMFLQSSDIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00630691;
- 90% Identity
- iTF_00630691;
- 80% Identity
- iTF_00630691;