Etor019308.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- -
- Assembly
- GCA_949318235.1
- Location
- OX439135.1:24576582-24587875[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0021 3.7 7.7 0.0 2 38 15 51 15 54 0.88 2 4 8.3e-05 0.15 12.2 0.0 1 39 298 335 298 338 0.92 3 4 1.7e-06 0.003 17.6 0.0 3 35 851 884 849 891 0.87 4 4 0.00023 0.41 10.7 0.0 1 36 1011 1045 1011 1053 0.84
Sequence Information
- Coding Sequence
- ATGTGCTTACGTTGTGTAGGAAATGCATACAATGCATTATTCGAAGATGACATCAAAGCTGCGCTGGTACTTGTGAAAGATGGCTGGTCATACGTTAGAGCAGCAGCTGCTAAGAACGTTCCTAAGAGCACACTCAACGACTATGCTAAAAATAAGTCAAAGTTTGGCGTCAAGCCTGGCAATATGCCTAAACTGGACTCAGAGTTAGAGGCAGCGCTGGTGCAGCGACTGAAAACTAACGTCATTGCTCCTAAAGCCTCTTACATCAAAGTTAAACAAGTTTTTCAGCAAGTCTGTCAAGATTCTGGTATTGAAAATCCATTCAAAGGTAACAAAGATCAGCAGCCAAGTTTGTCGTGGATCAGGAgattttttttgagaaatccaGAACTTTTAGAGGCAGCCAAACTTGAAAAAGTACGTTCAGCTAAACAACCTAGTGAAGCTGAGGCCAAGAGAAATCCAGAACTTTTAGAAGCAGACAAACTAAAGAGAGGACGTACAGCTAAACAAACTTCCACCGAGGCTGAGGTCAAGAGAAATTCTCAACTTCTAGAGGCAGGCAAACTACAGAGAGATCGTTCAGCTAAACAACCTTCCACTGAGACTGAGGCCAAGAGAAAGAGGGCTCCAATAACAATTACTTACATCTACCCACAAACTAGAAAATCAACTAGAGTAACGAGAGAGTCTGCGTCGACGTCCACGACAGATATATTTGAGAACTTGGAGGCAGAGCAAGTGAGCGGTGAACATGAGGCAAGTGACGTGGACATGACAGATACAGAGGCTAGCAGTCAGCAAACTAGGCTTCCTAAAGCTGATtctAAAAGTCAAACAGACTCCACACCAGCACAATCAAAAACCCCACGACCTAAGACTTTGAGCTACACTGAAGACGACGTCAAAGCTGCACTGGAACTTGTAAGGGACGGCTGGCCAGTTATCAAAGCAGCCGCTGCTAAGAACATTCCTAAGAGCACACTCAACGACTACGTAAGAAATAGATCCAAGTTTGGCGTCAAGCCTGGCAGTAAGCCTAAACTGGACTCAGACTTAGAGGCAGCGCTGGTGCAGCGACTGAAAGATGACGTCATTGCTCCTAAAGCAGCTTACGTCAAAGTTAAACAAGTTTTTGAGCAAGTATGTAAAGACTGTAACATTGAAAATCCATTCAAAGATAACAAAAATCAGCAGCCAAGTTTCTCCTGGATCAGGAGATTTTATGTACGACATCCTGAACTTTTAGAAGCAGTCAAATCTGAAAGACGACGTCGTATAGAGTCAATTTTAAGTACTTTCAAGAAAAAAACTGCTCCGATGACAATTGTATACCCACCAAGAAGCAAAACTGCTAAACAAACAAAAGAGATTGCGTCGACGTCTACGACTGAAGTAGTTGAGACAGAGCAAGTGAGCAGTGAACATCAGGCAAGTGACGTGGAGGTCACAAATACTGCTCAGTGTAGCAGTCAGCAATCTAGGCACTGTGATGTTAATTCCCCAGAGCTGCTAGAGATGACGGTGGACTGTGAAGAAGATGAAGACACCACGCAGTCACAGCAAGATGGTCACGTTGTCACCTCTACCAAGTGTCAAACTAAAATTGCTACGTCTGCTACTAAACAGACAACGGACACAGCTCAAGTGGCTACCTCAAACGCTGGTTTCAAGCAGATGACGACGGCACAGAAAGTGAGAGCTCTCAAAGCTGCTCTAAATCTGGTCAAACAAGGCATGTTGTGCAGCGACGCAGCTGCTAAGAAACGCATACCTGAGATGTTCTTAATTAACTACCTGGCCAGGTTTTGGAGGAACTCTCATGTGGAAGTCAAGAAGAAAGATAAGAAGTCACAGacaaatattaaattatcaaagaGCCCAGCAGCCAATAGTACAAAATCTACACCTCGTCGCAATACTAAAGAAACAGCGACAGTGGCGACAGCGACAGCAGCAACAGAAACAGTGACAACAGCTGTGATAAGATCAACAGACACAGCGATAGCAGAAACAAGAACAACAGCAACAATGacaacagcaacagcagcaacagcaacagcagtGACATCAGAATCAAGAGCGACGAGTAGTAGTGCTCCGTCACCACAATTAGACACGATGATAGTGACTACAGACCCTACACTAGATATCACAGAGATAGAGATAGCCAGCTGTGAAATACAAATACAAACCTTTAGCAGCGACACAGCGACACAAGATAACACAACAAAGACCCACGTGGCTTCACTAGATCTTACAGAGATAGAGATAGCCAGTTCTGAGCTACAAGATAAGCCAGTACCTACCTCTAGCAGTGAGCAAGCGACACAAGTTAACATGACAAAGAAACGTGTGGCTTCGCTAGATCTTACAGAGATACAGATAGCAAGTTCTGAACCACAAGATAAGCCAATACCTACCTCTAGCAGTGAGCAAGCGACACAAGTTAACACGACAAAGAAACGTGTGGCTTCACTATCTAGTACCTCCAAGAAAAATGTGGCAACTCCAAATAAGAGAAATTTGCCACGCAAGCAGTACACGCTAGAAGACCTGAAAGCAGCTCTTGATCTTGTAAGACACGAGGGCTGGTCACTACTTAAAGCAGCCAAAGCTAAGAACATCCCCAAGAGCACCCTGATGGACTACGCCAGCAACAGATCTAAACTAGGCACCAAGCCTGGGGTCAAGTCCAAGTTAGACAAGCACGTAGAGGAGGCGTTGTTGCTGAGACTGCAGAGTATGGGTGAAGTGACGAGGAAGCAAGTGGCGGCAGTCATAGCTCAGTATGTGCCACAATTATGTCAGGAGAAACAAATTGACAATCCCTTCAAAGACAAGCCACCCACTGTGTCGTGGCTGACCAGGTTTCTTAAGAACCACCGAGATCAAATCACCTTGACTAGGTCGTGTCCGGAGATATACGAGCCCAACCTAAGACTGGAAGGagaaaattctcaaaatgaAGAAGGCCAAAGTGACGCAACTCCAAAGCAGAAAATCCCACGTCCTAAGAGAATGACGTACACAGAGGAAGATCTGAAGACAGCGCTGTACCTGGTCAAGAAAGGCTGGCCGTGCAGTAAGGCAGCTAGACATACCAACGTACCCAAGAGTACTCTCGGTGATTACGTGCACAATAAGTCAAAACTGGGGGTCAAACCTGGGGTAGGACTGAAACTTGATGCAGAGTTTGAGCAAGCGTTAGTCAGGAAAATACAGAACTTAGCGGGGAGTGGTCAGAAGAAAATTACCAGAGCGATTTCTAAACTTGTGTTTGAGATCTATGATAAGACTGGGGTCAATCCTTTCAAGGACAATAGGAGAGGGTTGCCCAGCCCTCAGTGGATGTTCAGGTTTTATAAGAGACATCCAGAACTTCTGCAAGGAAACAAGTACTTGGTCTAG
- Protein Sequence
- MCLRCVGNAYNALFEDDIKAALVLVKDGWSYVRAAAAKNVPKSTLNDYAKNKSKFGVKPGNMPKLDSELEAALVQRLKTNVIAPKASYIKVKQVFQQVCQDSGIENPFKGNKDQQPSLSWIRRFFLRNPELLEAAKLEKVRSAKQPSEAEAKRNPELLEADKLKRGRTAKQTSTEAEVKRNSQLLEAGKLQRDRSAKQPSTETEAKRKRAPITITYIYPQTRKSTRVTRESASTSTTDIFENLEAEQVSGEHEASDVDMTDTEASSQQTRLPKADSKSQTDSTPAQSKTPRPKTLSYTEDDVKAALELVRDGWPVIKAAAAKNIPKSTLNDYVRNRSKFGVKPGSKPKLDSDLEAALVQRLKDDVIAPKAAYVKVKQVFEQVCKDCNIENPFKDNKNQQPSFSWIRRFYVRHPELLEAVKSERRRRIESILSTFKKKTAPMTIVYPPRSKTAKQTKEIASTSTTEVVETEQVSSEHQASDVEVTNTAQCSSQQSRHCDVNSPELLEMTVDCEEDEDTTQSQQDGHVVTSTKCQTKIATSATKQTTDTAQVATSNAGFKQMTTAQKVRALKAALNLVKQGMLCSDAAAKKRIPEMFLINYLARFWRNSHVEVKKKDKKSQTNIKLSKSPAANSTKSTPRRNTKETATVATATAATETVTTAVIRSTDTAIAETRTTATMTTATAATATAVTSESRATSSSAPSPQLDTMIVTTDPTLDITEIEIASCEIQIQTFSSDTATQDNTTKTHVASLDLTEIEIASSELQDKPVPTSSSEQATQVNMTKKRVASLDLTEIQIASSEPQDKPIPTSSSEQATQVNTTKKRVASLSSTSKKNVATPNKRNLPRKQYTLEDLKAALDLVRHEGWSLLKAAKAKNIPKSTLMDYASNRSKLGTKPGVKSKLDKHVEEALLLRLQSMGEVTRKQVAAVIAQYVPQLCQEKQIDNPFKDKPPTVSWLTRFLKNHRDQITLTRSCPEIYEPNLRLEGENSQNEEGQSDATPKQKIPRPKRMTYTEEDLKTALYLVKKGWPCSKAARHTNVPKSTLGDYVHNKSKLGVKPGVGLKLDAEFEQALVRKIQNLAGSGQKKITRAISKLVFEIYDKTGVNPFKDNRRGLPSPQWMFRFYKRHPELLQGNKYLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -