Etor014237.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- bab1
- Assembly
- GCA_949318235.1
- Location
- OX439132.1:30950046-30964584[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-18 1.4e-14 53.8 0.0 1 43 61 104 61 106 0.95 2 2 1.3 2.2e+03 -1.2 0.9 6 15 198 207 197 211 0.88
Sequence Information
- Coding Sequence
- ATGATACCACAGGCAAAATTACTGGAGTCTTCTCATGCGTGGCTAGGGGCTTCAACGTCTTCGATCACCGCAGACAGCTACCAATACCAGCTACAGTCCATGTGGCAAAAATGCTGGAATACGAATCAGAGTCTGGTACATAATCTGCGATTTCGAGAGCGCGGGCCGCTTAAGTCCTGGCGGCCCGAGACCATGGCAGAGGCAATCTTCTCAGTTCTCAAGGAGGGGCTCTCGCTTTCCCAGGCTGCTCGTAAATACGACATCCCCTACCCAACCTTCGTGCTCTACGCCAACAGAGTGCACAACATGCTGGGACCCTCGGCGGACGGAGGCGCagACTTGCGGCCCAAGGGGCGCGGGAGGCCGCAGCGAATCTTGCTAGGCGTTTGGCCTGAGGAACACATCAGGGGTGTAATCAGGGCCGTCGTGTTCAGAGACCCGCAACACATCAAAGAGGAAGCTCAGTCACTTGCTAGACTGTACTGCTTACAGGATCCTCTCTCGCAGTCTCCACAAGGCTACTCCAGCTCTACCAATGGTAATGATGGTGGAGGTAGCAGATCAGAAACTCCTACACCCGGATCTGCAGCAGCAGCTGCTGTAGCCGCGGTGGCACAGGGGCTTCGACAACAAATGTGTGGCCTCGCAGCTGGTGGTGAAGGTGGTAGTCAACAGGGCCCTAGTGCTGCTGCCGCTGCAGCCGCACTGGCATCAGCAATCTTAAGTCGTGAAGCAGCAGAGAGTATGCAAATTGGAGCaagtctaaataataatactctcaATGCACTCATGAACAACGGCATACCAGGAAGTAATTCTCTTCGTGGTCTAGGACTTGGAAATATAGGCGTTAGTGGTATGACTTATAAACCAGGTATGTTTGCACCCCCTAGACCAGAGAACTTATTTCAAGAAGATATTGAAGATATTGTTAAAAGTCCTTTAGATCATGTAGATAGTATGGATGAAAGCGAGTCAATTCAGCAGGTTAAACCTGAACCAGTATTGGCAGAAACATCAGcagattaa
- Protein Sequence
- MIPQAKLLESSHAWLGASTSSITADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPEEHIRGVIRAVVFRDPQHIKEEAQSLARLYCLQDPLSQSPQGYSSSTNGNDGGGSRSETPTPGSAAAAAVAAVAQGLRQQMCGLAAGGEGGSQQGPSAAAAAAALASAILSREAAESMQIGASLNNNTLNALMNNGIPGSNSLRGLGLGNIGVSGMTYKPGMFAPPRPENLFQEDIEDIVKSPLDHVDSMDESESIQQVKPEPVLAETSAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00650808;
- 90% Identity
- iTF_01347929;
- 80% Identity
- -