Etor019307.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- -
- Assembly
- GCA_949318235.1
- Location
- OX439135.1:24558175-24571396[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.022 38 4.4 0.0 3 39 25 61 23 66 0.77 2 4 0.006 11 6.2 0.0 1 39 222 260 222 264 0.89 3 4 4.5e-10 8e-07 29.0 0.0 2 44 569 611 568 612 0.90 4 4 0.00034 0.6 10.2 0.0 8 39 850 881 844 884 0.83
Sequence Information
- Coding Sequence
- ATGCCGcctaacaacaaaaacaacaaatctGCTGAGCCTTGTACTTCACGACAACACAAGAACTACACAGAAGCAGATCTGAAGGCAGGAGTGGAGCTCATAAAGAAGGGATGGACTTACAAGAAAGCAGCCGCAGCCACCAAAGTACCTAAGAGCACGCTCGGAGATTACTGCAAGAAATACGGCACAAAATGTGAAACTACGGttaaattagaagaattatttgaaaaagCGTTAGTGATTCGCTTGCAAAGTATCTCTAACAATCAGGCTAATATATTTCAACACATAGTACAGCTCGTCAAAGAAATCTACGACAATTCTGAAGTTCAAAATCCTTTCAGACACAACGAGTTTGGAATTCCGAGCGTCAGTTGGATGAATGACTTCTACCAGAAGCACCCCGAAGTTTTGCCTCTTGCTGTTTCTAATATCTCAATGGAAAACAACATAATACCAGTGATACCAAAACTAGAGCCAGTTGATGTTAGCACGTGCAACAATGCAGATGGAGATGATGAAACTTGGAGCAACAATGAGATGCCAGTGATGGAGGAGGATCCCTTGGATATACATCAACATGAGGACAACGTGATGGCGTGTAGCAGTCAAGCTACGTCTTTAACTACTCCTAGCAAGAAGTCACATAAGAAGGCCAGTTACACACAAGAAGACATGGACTGGGCAGTTGACCTGGTACAGCAGAAAGGCTGGACATGCATACAGGCCGCTGAAGCCACTAAAATACCTCGAAGTTCCATCGCTGAGTTCATAAGACTAGGAAAAACAACGGTGCCTAAACGTGGCCGCAGTATAAAACTAGACATGGACTTCGAGAAAGCCTTAGCTGTCAAAGTTGAGGAATTAGaggacaaaaatataaaaaatgttcgtAGGACCCTGGGACAGCTGGCTAAGGATATTTGTGATAAACTGGGACAGGCAAATCCATTCAGAGACAATAGAGATGCTTTGCCAAGTAAGAAGTGGGTATCACGTTTTGTCACTAGGCACCCTCAGCTCAGGATCATCTTGGACAGGAGAGTAAGAAATGTCAAGGTGACTCCAGATAACATTGAGCCATTTGAGCAGATCACAATAGCAGGAGGCCTGGATGTGACACAGCCAGACTCTGAGGTAGAAGACAACATCAATGTGATCAACCCAGTGGAGGTCATAGAGGTCAAATGTGAGCCCTGTGAGGTACAAGGGGACATCAACTCAGAGGAGGTCATTGAGGTCAAATGTGAGCCAGTGTGTGAGATACATGAAAACATCAATGTGACCAACCCAGTGGAGTTCATGGAGATCAAATGTGAACCAGTGTGTGAGGTACATGAAAACATCAATGTGACCAACCCAGTAGAGTTCATGGAGATCAAATGTGAACCAGTGTGTGAGGTACATGAAAACATCAATGTGACCAACCCAGTGGAGTTGATGGAGATCAAATGTGAGCCAGTGTGTGAGATACATGAAAACATCAATGTGACCAACCCAGTGGAGTTCATGGAGATCAAATGTGAACCAGTCTCTGAGGTACATGAAAACATCAACCCAGTGGAGTTCCTTGACGTCAAGTGTGAACCACGTGTCACTCTGAAGTCTTCTTCTGTACCCAAGGACAAAAAAGTCCATGTGGTGTACAAAATGCCACGGCAACGTAAGAAAGAACCAGGCAACCGGTCCTATAAAAACTACACTGAACAATCTCTGGACCAGGCAAAGGAAAATGTGCAGTCTGGTAAATTATCTCTTGCCAAGGCATCCAAATTGTACAAAATACCTGTAGGAACATTGCACAACAAGTTAAATGGCAAGCACACAAAGAAGAACGGAGGACAGACTGCTCTCACGAACACGGAGGAAACTGCCTTACTTGACAGTATCCTCATTGCTTCGGATTGGGGATACCCATTGAATTTACTTGACTTTCGATTCTACACCAAGTCATACCTTGATAGAGTGAACAAACAAGTAAAACAGTTCAAAAATAATTTCCCTGGAGAAGATTGGGCCTACAGTATAATACGCAGGCACAAGGACAAAATTGGCAAAAGAATTGCAACTAACATCAAGCCGTCTAGAGCACAAGTTAGTCCGCAACAGCTTACAGACTACCACATTCAATCGGACACAGGTGTCAGCAGCTCTGACAGCAGTGACTCTGAGGGAGGTGATGATGATGACGACGATGATGATGATGACGACAATGATGATGAGGGAGCAGGAGAAGAGGAGGAAGAAGCTGCTGACATCCCACCAATTAGACTGATCCCCCTTGGTAGCTACCTCTTGGCCCGCTTCCAAGGTGGAAGTGGCCGCCACCCAGTTTGGTTCCGTTACGTGTGTGTGGTAGAAACTGGGACCCCTGATGGTCTGCAAGTCATGGGATTTCAATCCCTTAATGGAAGCAAGACTGTTTTTGAACCTAGAGAAAGGGATATATCAGTCATAACCCATAGTGATATTCTGGCTGTTTTACCTCACCCTACTCTTACAGATCCACTGCGACGTCCAAACTACAACGAAGCTGACGTGAACACTGCCCTCCACTTGATCAAGATAGGCTGGTCTATAGGCAGAGCTTCTATCAAAACAAGCATACCTAAAAGTACGTTAGCTGAGTATTGTAAGAAAGGAGTCAAGTTTGGAAGTAAAACTGGTCCAGCTATGAAAGTAGATCCTAAGTTTGAGGCTACTTTAGTGGCCAGGTTACAACAAGATCTAGAGCAAGGGGTTAAAAATACCAAGCAAGTCATAGGAGAAATTGTGAGACATATTTACCAACAGTCAGGGGTTGAGAATCCTTTCAAAGACAGCAAAGATGAGGTTCCAAGTATTAAGTGGGTCAATGGGTTTCTTAAAAGACATCCTCAGTTTAGATTGCATGTGTGA
- Protein Sequence
- MPPNNKNNKSAEPCTSRQHKNYTEADLKAGVELIKKGWTYKKAAAATKVPKSTLGDYCKKYGTKCETTVKLEELFEKALVIRLQSISNNQANIFQHIVQLVKEIYDNSEVQNPFRHNEFGIPSVSWMNDFYQKHPEVLPLAVSNISMENNIIPVIPKLEPVDVSTCNNADGDDETWSNNEMPVMEEDPLDIHQHEDNVMACSSQATSLTTPSKKSHKKASYTQEDMDWAVDLVQQKGWTCIQAAEATKIPRSSIAEFIRLGKTTVPKRGRSIKLDMDFEKALAVKVEELEDKNIKNVRRTLGQLAKDICDKLGQANPFRDNRDALPSKKWVSRFVTRHPQLRIILDRRVRNVKVTPDNIEPFEQITIAGGLDVTQPDSEVEDNINVINPVEVIEVKCEPCEVQGDINSEEVIEVKCEPVCEIHENINVTNPVEFMEIKCEPVCEVHENINVTNPVEFMEIKCEPVCEVHENINVTNPVELMEIKCEPVCEIHENINVTNPVEFMEIKCEPVSEVHENINPVEFLDVKCEPRVTLKSSSVPKDKKVHVVYKMPRQRKKEPGNRSYKNYTEQSLDQAKENVQSGKLSLAKASKLYKIPVGTLHNKLNGKHTKKNGGQTALTNTEETALLDSILIASDWGYPLNLLDFRFYTKSYLDRVNKQVKQFKNNFPGEDWAYSIIRRHKDKIGKRIATNIKPSRAQVSPQQLTDYHIQSDTGVSSSDSSDSEGGDDDDDDDDDDDNDDEGAGEEEEEAADIPPIRLIPLGSYLLARFQGGSGRHPVWFRYVCVVETGTPDGLQVMGFQSLNGSKTVFEPRERDISVITHSDILAVLPHPTLTDPLRRPNYNEADVNTALHLIKIGWSIGRASIKTSIPKSTLAEYCKKGVKFGSKTGPAMKVDPKFEATLVARLQQDLEQGVKNTKQVIGEIVRHIYQQSGVENPFKDSKDEVPSIKWVNGFLKRHPQFRLHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -