Etor014655.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- Trl
- Assembly
- GCA_949318235.1
- Location
- OX439132.1:41101170-41107896[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0016 2.8 8.0 0.0 19 35 226 243 210 246 0.79 2 4 8.4e-12 1.5e-08 34.6 0.0 1 38 259 295 259 296 0.95 3 4 0.11 2e+02 2.1 0.0 23 34 331 342 315 350 0.81 4 4 2.5e-10 4.3e-07 29.9 0.0 7 38 376 407 372 411 0.89
Sequence Information
- Coding Sequence
- ATGGCTGCAGAGAACTCGGAGGGTGAAACAAACTTTCTATTCTGGGGTAACCATGCAACGGAGATGGCAGGGACATTGGCTACACTACAGCAGAACTGCTCCATGGTGGATGTCACTCTACGAGCCGGAGGAGAAACCATTGAGGTGCACAGGATGGTACTTTGTGCCAGCAGTCCCTACCTTCAGcAAATACTGTCAACAACAAATGACCCCAGCCCATGCATCAGTATACCTGACGTAGAAATGAAAGAACTAAAAGCTATAATTGAGTTTATATATCGTGGAGAAATCAGCTTTCTTATCAACCAACTACCCTCTCTATTGAGTGTGGCAGAACTGCTTGGTATACATGGACTAAACGAGATAAGCTCTCAGATCCCTCAAATGGAGGAATGTGAGAGTGAGGTGGTGTTAGAACAGGATGCAGAGGTAGAGTCAACTGCAACCATTGCCATGCCTCTCTGGGAATCTGACTTGGgaacagaagaagaagacgCAAGTGTTGCTGTAGTCGAGGAAATTGTGGATGATAAACACATAGATGAGgATGAAGCCTTAGCACAAAAAGTAAAGAAGATTAAAATGAAAAGAGCAGAGCAATCCCATAGAGGAGAGAGAAAATACAGTGATGCCATGCTAGAGGCTGCGTTGATTGATCTCAAGGCTGGACGCTCCTTGTGTGACACATCAATAGCTTTCAACATACCTCGTACTACTTTATACATGAAAGCACGCTCGTGTGGTGTTCTCAACCCAATACAGAAGTTAGGATACACTAAGGAACAACTGCAAGATGCAATCAATGCCGTTAAAGAGGGCTCAAGTCTCCAGCAGGCTTCCAATATGTACAATGTGCCTAAAACTGTGCTGTGGAGGAGAGTTCAAGCATTCAGGAATGAGATTCCCTGTAGAAATCAGCAGGCGTACACATCAGCAGATAAGCAAGCAGCGGTGGAGGCTTTGGAGAGAGGAGAGCAATTACAGGCAGTAGCAAACCAGTTCCCTATTCCTAAAACTACGCTCTTTCGAGAGAAAGTAAGGCTTGTTGAGAAAGGTATTTTGCCGAGTGACTGTATCAAACGCCGTAAAGGTGACGCTGACTTCACGAGGTCAGCGAGGGTAGAACAAGCAGTAATTGCTTGTAAAGAAGGCAAAATGTCACAGTCAGCTGCTGCATCTCTCTTTcagATTCCAAAGACTACAATATGGCGCAAGCTGCAACAAATTCAGCCAGGAAGTGGTAAATCTGGTAAGAAGTCAAGGAGCCATGAAGTCAAGAGTACTGAAGTAGAAATGTCAGAAGAACAAGTAGATGAGGAGCAGGAGACATATGAAGTGGACGGTAGCAACCTCAAGTTTGTTACCACAGAAAATGGAGAGTTTGCAGCCTCACTAATTATCTTGTCTACTGTAGAGGGAGAGCAAATGCAGACTGAAAATCAGCTCATTGTAAATAATGAGTCTGCAACGGAGTCCATGGCAGAAGATGACAGTTTGAATGATGGTGAGGAAGAAGATTCAGAAGGTGCAAAACCTTGA
- Protein Sequence
- MAAENSEGETNFLFWGNHATEMAGTLATLQQNCSMVDVTLRAGGETIEVHRMVLCASSPYLQQILSTTNDPSPCISIPDVEMKELKAIIEFIYRGEISFLINQLPSLLSVAELLGIHGLNEISSQIPQMEECESEVVLEQDAEVESTATIAMPLWESDLGTEEEDASVAVVEEIVDDKHIDEDEALAQKVKKIKMKRAEQSHRGERKYSDAMLEAALIDLKAGRSLCDTSIAFNIPRTTLYMKARSCGVLNPIQKLGYTKEQLQDAINAVKEGSSLQQASNMYNVPKTVLWRRVQAFRNEIPCRNQQAYTSADKQAAVEALERGEQLQAVANQFPIPKTTLFREKVRLVEKGILPSDCIKRRKGDADFTRSARVEQAVIACKEGKMSQSAAASLFQIPKTTIWRKLQQIQPGSGKSGKKSRSHEVKSTEVEMSEEQVDEEQETYEVDGSNLKFVTTENGEFAASLIILSTVEGEQMQTENQLIVNNESATESMAEDDSLNDGEEEDSEGAKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00630770;
- 90% Identity
- iTF_00630770;
- 80% Identity
- iTF_00630770;