Basic Information

Gene Symbol
ct
Assembly
GCA_949318235.1
Location
OX439134.1:12746028-12771371[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-28 4.1e-24 84.7 0.0 2 72 408 479 407 484 0.95
2 3 4.1e-32 3.1e-28 97.9 0.1 3 77 832 907 830 909 0.96
3 3 7.9e-31 6e-27 93.8 0.1 3 75 1070 1143 1068 1147 0.96

Sequence Information

Coding Sequence
ATGcgAGCTACGTTAGCAGAGAAGGAAGTGGCAGCGCTTAAGGAGCAGCTTGCAAGTCCAGATAAATCAAGCTCAGGAAGTTCAGGAGGAAGTATGCCTGCCGCAGCTCGAGCTCAACAATCAGGAGATGGCGCCGAGGTGGCGTCTCCTGCAGGACAAGGAGAGAGTGGTGCCAGACCTGGCCTTGAACAGGAACTAGTCAATAAGGAGAAAGAGATCTCACAACTAAGCGACGATATCGCACGACTACAGACTGCTCTTAGTAGAGCCCAAGAAGGTACAGCAGCCCAAGTGGCTAGATTACAGGAACAATTAGAGCAGAGATCGGCCAGTATTGCACGTCTTGAAGCGAGGCTTGAGGCACAGAGAGACTATGAGGACGTTAAAAGAGAGCTCAGTATCCTGCGCTCGATGGACCTGCCGACGTTCGCCGCGGCCGCGGCTGCCGCTGCAGCAGGGGAAGGTCAGCCTCCAGGCAAAGCTCTGGAAATCCTGAACGAGGCAGCAGCCGCTCTGACGTCATCACGTCGACCCCCAAGTCCTATCTCCGAGGAAGCCAACCAAGCAGAGGGCACTCGTACACCaacctcctcctcctccaccaCAGGTCCAGCCCTCTTCCCTCCAGCGCTACAAACAGTTGAGACTTTCGGCTCATTTCTAGGTGAGGAAATCGTTGCCAACTGGCGGCGATCTCTAGAGCGCACAATTCTAAGTCAAAATGCGGCCTCAGCGTCGTTGCCTCCCCCCGCGAGTCAGGTAGCTGCagtagcagcagcagcagcggcGGCGGGTGGAGAAGCTACTGGTGACAACGACAACACCAGCCGGCCAAGTAGTCCTGAGCACGACGTCAAACCCGACATCCAAAGATGTTCCCCTCCCGACACTCCCACCACCCCCTCAATGCAACAAATGCTACAACATCAACAAGcgttgcaacaacaacaaatccTCATGATGAATGGCAACACCCCTAAAACACCACCTTCAGAATCCAATGGTAGTGGTCTAAACAGCCCTAACAATGGACCTCTCATGCACACATCTACCCCTATCTCAAGTGCAGATGCACCAAAAACCAGTCCATTTAGATTTGATGAAAGAGGACCTTTTAGATTTGACGAGCGTGTCAATTTAGGTGAATCTTTAATTCCTAAGGGTGACCCAATGGAAGCAAGGTTGCAAGAAATGTTGAGGTACAACATGGATCAATACGCAAGTCAAAATCTTGATACTTTACATATCGCGCGACGAGTAAGAGAGTTACTGTCCATTCACAACATTGGTCAGCGATTGTTCGCCAAGTACGTGCTGGGCTTGTCTCAAGGGACGGTCAGCGAACTGCTCTCCAAGCCAAAACCCTGGGATAAACTTACAGAGAAGGGAAGAGACTCTTACAGAAAGATGCATGCGTGGGCATGTGATGAAAATGCAGTGATGCTACTCAAGTCCCTCATTCCAAAGAAAGGCAAGGAGGGTGGCGGACTTGCTTCATTTGGTGGTCGACCTGGCGAGAACGATAGCTTAACCGAGGAGCGGATTGCCCATATTCTCAGTGAAGCTAGCCAAGCTATGAAGGGGGCCGGTGCGTCCCCTCAGGGGGGGCCTCAAGGACCCCCTAACCCCAATGTTCTTGCAGCAGCGATGGCGGCAGCAGCAGCGGCGGCCGCGCAGCAGCATCAGCAAGATGACAGTCGCAGTAACGATAGTCGATCTCCGGCCTCTGCACAGGAGAAAATGGCTCGTATTTATCAAGAAGAACTTGCCAAGCTGATGGGACGCAGATTGGAAGACTCTCTGAGGGTGGCAGGAGGTGGACAGCCCCCTCCACCTGGCCAACACTTCCCCAGTCTACTGTTCCCCCACTTTTTCGGTCCTGGAGGTCCCGCAGCTGGTCCCATGGATCGTACACATGATGAAATTCGCCTTGCCCTTGACGCATATCACCGTGAACTGTCCAAGCTAAACCACTCAGGTTTAGGAGTCCCTCCTGGACTCTTAGCAATGCACCAGCCTCCAATGATGCACAATGGACAAGCACAAGATCTCTCTTTACCCAAGGAACGTCCTCCTAGTGCTCGTGACCCCAAGAGCTCGCCCCTTCACTCTTCAAGCAGCAGTCATAATGGTGGCATGTCAGATGCCGAAGATAAACTTTCCGTTAGCAAGGAAATCAACGCCGCGACCGAGGCTGCTGTAGCCGACGCTTTGAGGCACGCGGGCAGCGCATTTTCCCTCGTCAGACCGAAAACTGAGCCTGGTAGTCAAGCCAGCTCTGTGTCCTCCCCAAGTCCCCTCAACTCCATACTTCCCCCCGCGGGACCAGGAGGCGAGGATTTCACCGTAAGCGCCGCGAGTCCATTACAACGCATGGCGTCTATCACCAACTCTCTCATCTCCTCTCCGAGCACCCCCTCTCATCACTCCCCGGCACAGCGACCTCTCAAAGCAGTGTTACCACCTATTACACAACAACAGTTTGACCAATTTAACAATCTCAACACTGAGGATATTGTCAAGAAGGTAAAGGAGCAGTTGAGTCAGTACTCGATCTCTCAACGTCTCTTCGGCGAGAGCGTACTGGGACTATCGCAAGGTTCCGTGTCCGACCTCCTGGCTAGACCAAAGCCTTGGCATATGTTAACACAAAAAGGTCGAGAACCTTTCATAAGAATGAAGATGTTTTTGGAAGACGAAAATGCCGTACATAAACTCGTAGCATCGCAGTACAAAATTGCACCAGAGAAACTCATGAGGACTGGGGGTTACGGATCTATCAATCCACCTGGATTCGAACCCATGAACTTTGGCCTTCCCAGAGATGGCCGAGATTTTAACAACTTCCACCCCAAGGCCAGCATGAATAAACCACCCAGCAAGGCACCAGTACCTAAACTGCCTGACCCCGTGGTAAAAGCAATGGAGAACGCCGCTGCTGCAGCAGCTGCACTGAACCCTGCCGCAGTTTCGGTAGCAAGTTTCCCTCCTCCACCACCTTCAGCCCCCAGTACTCCATCTTTACCTCCACCCCAGCCCACACCCCCCGCACCATCTCCAGGACCTCGTCATAGTCCCCCTGCTCCCTCAGAATCCCCTAGTCCATTATTAAAGAAGACAGGGGGCGTGTCAAGGTCAATGGTTGCAGCTGCAGCTGCCGCGATGCAAAATCAGCAACCTAGTGTATATGAAATGGCAGCCTTGACCCAAGATCTCGATACACAACTTATCACAACCAGAATCAAGGAGGCGCTGCTTGCTAATAATATCGGACAGAAGATATTTGGTGAGGTTGTATTAGGACTCTCCCAAGGCAGCGTCAGTGAGCTGCTCTCGAAGCCCAAACCTTGGCATATGCTCAGTATCAAGGGTCGTGAGCCTTTCATTCGCATGCAGCTTTGGCTTACCGATCCTCATAATGTTGAGAGGTTGCAACAGATGAAGAGTGAAAGGCGTGAAGCTAACAAACGACGTCGCACTACGACTGGCGCTGGACCCGCTGATAATAGCAGCGATACGTCTTCTAACGATACCAATGAGTTCTATCATGCAACCTCCGGCAGTCCAGGACCTCCAAGTAACAAAAAACAACGCGTTCTCTTTTCTGAGGAACAAAAGGAAGCCCTGAGACTTGCTTTCGCTCTAGATCCATACCCCAACATGGCAACTATCGAGTTCTTAGCCAATGAACTCAACTTGGCAGCACGCACTATCACCAACTGGTTCCACAATCATAGAATGAGACTCAAGCAGACGGTACCACACGGTAACAACAACAATGAGCCAGTACAATCACCCCAATCACAGAATTCCAACTCCAACTTTGACCCCGCGCAGTTCAGACTGTTGCTTGGTCAACGTTTGGTTGAGATACATAAAGAGAGAGGCGGTGGTGCGATGCCTCCTTTCCCGTTCTTCAACCCCTCTGTAGCGATGGTAAGTCCCGCTACCTCTCTACCCAACTTACCCCCTCTGCCTCCCTTGCCCCCACAACACCTGCTAGCCGCCGCCATGAGAGAACAGATGAGCGGTCTTGACCTCTCAATGACCTCTATCAAGAAAGAAGCGAGTGACTCTGAAAGTGGAGGAGACTCCGATGACTCGAATATGTCTACCGATTTCTCGTCGCAACGCTTGCCACCCGCTCCCGCACCAATCCGCTCTGCGTCTCGACGCAAGCCCGCGGCACCGCAGTGGGTCAACCCCGAGTGGCAGGAAGATAAGGAGAAAGATGATGCAAAGTCACCGCCTGCAATCATCAACGGCGTTTGCGTCATGCAGACGGATAACTTTGACTCCGTGCTTCGTCGCAAAACAGAGCCGGACGACGAAACTGTACGACTAGAGCCGACACCACCCGAGAAGTCGGAGAAAGCCGAGGAGAAGAAAGATAGCTCGTCGGAGAACGCGGAGACAACGCTCGAGCTAGGAGTGAACGCGAGCACAGAGCAGAACAGTGAGAGCGTCGCTGAGGAGGAAGAGGAGAGCGATGACTGGGAGCAGAAAATACAAACAAATGAAGAATCAGATAAACAAATGAAAGTTGGCGGTGATGAACCCAATGAAGATTGGGAGTTCTAA
Protein Sequence
MRATLAEKEVAALKEQLASPDKSSSGSSGGSMPAAARAQQSGDGAEVASPAGQGESGARPGLEQELVNKEKEISQLSDDIARLQTALSRAQEGTAAQVARLQEQLEQRSASIARLEARLEAQRDYEDVKRELSILRSMDLPTFAAAAAAAAAGEGQPPGKALEILNEAAAALTSSRRPPSPISEEANQAEGTRTPTSSSSTTGPALFPPALQTVETFGSFLGEEIVANWRRSLERTILSQNAASASLPPPASQVAAVAAAAAAAGGEATGDNDNTSRPSSPEHDVKPDIQRCSPPDTPTTPSMQQMLQHQQALQQQQILMMNGNTPKTPPSESNGSGLNSPNNGPLMHTSTPISSADAPKTSPFRFDERGPFRFDERVNLGESLIPKGDPMEARLQEMLRYNMDQYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKEGGGLASFGGRPGENDSLTEERIAHILSEASQAMKGAGASPQGGPQGPPNPNVLAAAMAAAAAAAAQQHQQDDSRSNDSRSPASAQEKMARIYQEELAKLMGRRLEDSLRVAGGGQPPPPGQHFPSLLFPHFFGPGGPAAGPMDRTHDEIRLALDAYHRELSKLNHSGLGVPPGLLAMHQPPMMHNGQAQDLSLPKERPPSARDPKSSPLHSSSSSHNGGMSDAEDKLSVSKEINAATEAAVADALRHAGSAFSLVRPKTEPGSQASSVSSPSPLNSILPPAGPGGEDFTVSAASPLQRMASITNSLISSPSTPSHHSPAQRPLKAVLPPITQQQFDQFNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGSINPPGFEPMNFGLPRDGRDFNNFHPKASMNKPPSKAPVPKLPDPVVKAMENAAAAAAALNPAAVSVASFPPPPPSAPSTPSLPPPQPTPPAPSPGPRHSPPAPSESPSPLLKKTGGVSRSMVAAAAAAMQNQQPSVYEMAALTQDLDTQLITTRIKEALLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLTDPHNVERLQQMKSERREANKRRRTTTGAGPADNSSDTSSNDTNEFYHATSGSPGPPSNKKQRVLFSEEQKEALRLAFALDPYPNMATIEFLANELNLAARTITNWFHNHRMRLKQTVPHGNNNNEPVQSPQSQNSNSNFDPAQFRLLLGQRLVEIHKERGGGAMPPFPFFNPSVAMVSPATSLPNLPPLPPLPPQHLLAAAMREQMSGLDLSMTSIKKEASDSESGGDSDDSNMSTDFSSQRLPPAPAPIRSASRRKPAAPQWVNPEWQEDKEKDDAKSPPAIINGVCVMQTDNFDSVLRRKTEPDDETVRLEPTPPEKSEKAEEKKDSSSENAETTLELGVNASTEQNSESVAEEEEESDDWEQKIQTNEESDKQMKVGGDEPNEDWEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00630382;
80% Identity
iTF_00630383;