Basic Information

Gene Symbol
Arid4b
Assembly
GCA_949318235.1
Location
OX439130.1:16968447-16988325[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-26 9.1e-23 80.8 0.3 1 89 297 383 297 383 0.95

Sequence Information

Coding Sequence
ATGCTGGGGGATGATCCGCCCTACTTGGCGGTGGGCACTGAGGTTAGTGCCAAATATAAGGGTGCGTTCTGCGAGGCTAAAGTGAGAAAGGTCGTTCGCTCAGTCAAGTGCAGGgTGACCTTCAAACTTGGCCTTGGCACTTCCATAGTCACGGACGACCAAATCAAAGGCACTTTAAGAGCTGGTGCCAATGTTGAAGTAAAACATCCTGAAAAGAAAGAGTTTGTGGAAGCAACGATCACCAAGATCCAAGATTGCAGTCAATATACAGTTGTATTTGATGATGGTGATATTACAACTTTACGTCGCACGGCATTATGTCTTAAGAGTGGACGACATTTTGCAGAGAGTGAAACATTGGATCAGTTACCTCTCACACATCCAGAGCATTTCAGCAACCCTGTTATTGGTGGTAGAAGAGGTCGACGTAGTAGGCAAGCTCAGGATGATAGCAGTGATGAAGAGGAAACACCCAAGAAGGGTAAAAAGAAAGATGAGAAAGAAGCTGACATCGGAAAAGTTGTATGTGTAGAGTTAGGGgacaagaagaaaattaaagacAACTGGTTTCCTGGCCTTGTTGTGGCACCAACAGCTCAAGACACAGTACGAATACGTGTCAAAGATGATTACCTTGTTAGATCTTTTAAGGATGGCCGATAcTATACAGTTCCTAAAAAAGAAGCTACAGAATTCACAAGAGAAATTGGTTCAAAAGTGGATAATAACACTCTTAAAACTGcTGTAGAAAAGGCATTATTATTCCTTGATAAAGATGAACTGCCTCCTCACTGGGACCGTGAGCTACTTTTTGGGATTGGAGAAAGTGGTGACAGTGGATCAGATGGAGGCTCCGACAGTGAGAGTTCTGATGATGAACGTCAAGAGGAAAAGGACCACTTCGTTGCTCAGCTGTACAAATTTATGGATGATAGTGGGACCCCAATAAATAAAGGACCAACAATATTTGATGAGGATcttgatttatataaattatttaaggTTGTGCATAAGCTTGGAGGTTATAATCGTGTGACAAATCAAAACCAGTGGAAATTAGTAACTGGtaaattaaatcttaaatcACTTACAACTGTAACAGCAAATCATGTGAAGCAGTCCTATAAAAAgTACCTACATAGTTTTGAAGACTTCAATCGTAAGTTGGGCTGCACAATGGTGAACCATCCACGAGGTAGTCGGTCTCGTCATAGATCAGGACGTAGTTTAATCAGAGACAGAGATCGAGCTACTCCAGTAAATACTACTAAGCTACAATCtgacaaagaaaagGAAAAACCAAGCACCAGCTCGAGTGCTTCAACCACACCAGTTCCACCTAAGAAACAGGAAGCAGAAGAGGAGAAAAAGAAATCTGTGTCAAAAACTGTTAAAGAAAAGGAAGAGAAAGTAAAGCCCAAGGAAGAGAAGAAGGAAGTTAAAGAGCCCCCCGAAGACACTCCTAAACCTCGCAGAGAGCTGAAGATGAGAAGCGAGCGACTTAAGTTAAAAGAGGAAGAAATAGCCAAGAAAAAGGCATGGCAGGTTGATGACAGCCAGTCAGAAGAAGAAGCTTGTAGCAGTGCCAGTGGTAGTCAGGCAAAGTCGGATGCTGGCTCCCGCACTCCATCCGCAGCAGAAACTCCTGATGTAGATCGTGTGGAACCAAAATGGGCAGGACCAAAAGTAGAAGAAGAGGAGGACGAATCTCGTGAAGTACCAGAAAAAAGGGGGGGAGATAAAAAGGAAGAAACACGGGAGAGAAGGCGGCCTTTTTCTGAACGTAAAGCAGAGGCTAGCCGAGCAGCACAAGAAGAGGAAGAAAagcaAAACCTAAGGTCAAGATCCAAGGGCGGTGTGACTCCAGAGAGAAGAACCAGAGAGAGCCGCACTCCTGTTAGAGATTCTGAGAAAAAGATGGTCGTCCGTAGTAGAATTAAAGATGAAGAACCTCCTCACCCACCTCACCCACCACCCCAACCGCCCCAACCGCCCCAACCACCCCAACCCCAACCTCAAACTTCTGCTCAGTCATCATCTTCATCTCCAAATCCTCCTCACCCACCATCCCAGCTACCTAAAAAGAGAGGTCGTAAGAGGAAGGATAGTGAGAAAAGTCGCTCAGGAGATGAGCCAGGACATGTGGCTAATGATGTGCAGGTGCAGCTGGGTGATAAACTGAAGGTCTACTATGGGCCGTCGCTTGAGTCAAAAGTTACTTACGAAGCTAAGGTAATAGAAATAGAAGAGGATGGTTCCCCAAACATGTTTCTGGTTCACTACACTGGTTGGAATACCCGCTATGATGAATGGATACCTCGTACAAGAATAGCAGAAAATCTAAGTTGGACTCCAGCTCGTGCCAAACGTAGTCgtttacaacaacaacagcagcaacaacaacaagctcaacaacaacaaagttcTCAGGTGAAGACTCCCAAGTCTATGAGAGGCCGTCCAACTGGTCGTTCTGAAGGTGGGAGTGCTGCTTCATCTCAACATACACGTTCCACCACGCCCTCCTCAGTTACTTCATCATCAAGTCGTACTAAGTCTCCAGCTCAAAGCAGTCGAGCCCAGCGCGCTGCTTCACGCTCTGAGCAAGCGTCAGTATCTGGTGGTAACACAAGCAGTATCGAGTTGAGACGTCGGCCACGTAGAGTATCAGGACATACAGacTTTCTGAATGTTTCTGAAGACTCTGACAGTTCAGAGTTTGAGGAGATGGAAGTTGAAGCTATGTCTCTAAGACGTAGAAGGGACAGACAAGATTCAGAGAGCAGTCTGCGAACCGAGGTACCTGAACCAAGAAGGCTGGAGAGACAGGCTAAGAGACGATCTCTTAAGAAGGAGAAGTCTGAGGAAGAGGAAGAAGAGGAAACAGAGGAGAGGGAATGTGATTCTGATAGTCAAGGCTTGCCACGACGCAGTAGCAGACGCATACGTAGAATTACTGAGAGCGAGAGGAAGGAAGAGGAGCAACAACCCTCTACTAGCAGCAAATCTGAGGAGGAGCAACCTAAAGGTAGAGATTTTGACCTCAACCAAATTAGATCTGAACTTAAAGGCTTTGATAAAGCAGTTAAATCTCCTACTGAGAGTGTACCTAGTGAAACTGATGATAAAGTAATATCACCCACAGTGAAATCAGAACCTGAGGAGCCCACTACTCCAGAGGTCACGACTGAGAAGAGTGAAGAGCCAGCCTCTACATCATCTGCAAAGAAGGATGCTGCGGACACAACCAAAGCAGAGACTGAAGATATTTATGAATTCAAAGAGCCAGAACCATTTGAATTTGAAGTTCGAGGTAAACGAGATACACCGCTTGCAGATAAATTAAGTAAGAGACCTGTAGTTAGATTATTTGAAGATACAGCTGAACCTAAAAAAGAAACTCCAAAAAAGAAAACACCCAAAAAAGATGTAAAACCCACTCCTCCTAAAGTAGAAGAACCAACTACTTCTGATACTGAAGGCAAGAAAAGACGTAGAGGTCCTGCTAAAAGATTAGAAGATGAGATGTCAGAAAAGCCTAGTAAAAGTAAATCACCTTCTCCAACTAAAACACAAACCCAACAACAAAAATCTGATGCTCTCACTGCAAGTGAAGAGGCATTCAAAAAGTTGTATGAAAATACTACTTTCCCAGTTCTTGATACTCAAACAGCAGCCCCTAGTTCCTCCTCTCAGGGTGGTACATTAAAATCTCCCAGAACTCTAGACTTGTTTTCAGATTTGCCAGAGGAAGCAGATGAAGATCATGGAGATGATGAAGGAGAAGACAGGCTGGTTATTTTAGAAACTGATACAGAGCCTCCTCTCTTCTCATATCCACAACGACATGAAGAAATGTTGCCAACTCCAAGCTCTAGAGCACCTTGTCCCACATCTCCTGAGCCGGGTAAGAGTTCTGATCAGAATAAGACAGATATGATGTCTCTCTTTAGCTTTGCATCTAGCAAGAAAAGTGATGTGGTGAAGCTGGTAGTACAAAAAGCAGAAGATGAAGAAGCACAAGTAGTGGAACGCCCAGTACCACTAAATGATGATGTAATGAAATTATTCTTGAAAGATgatgaagatgaagaagaagactCGATCAATGCTGCCATTCAACGTGTGATATCTCAATCCAACGACGAAGATGATGTTGACCTTTTTGGTAAGTCGACTACTTCTAAAGTCACCCCTCAAGCATCAGAACCCAAAAGTACCCCAAAATCTGTACCTCCTGAAAGCACAAGTAAAACATCTAAAATTTCACAAGCTTCTCCTAAATTACAACCAGTTGAGACTTATAGTAAAGTCTTGCCAAAAATACTGCAGCCTGTGGAAACTTACAGTAAAACCACACCAAAATCAACTCCAGTTCAGATTACTGATGCAACTCCAAAGGTAGCTCAGAAGGTTGTACAATGTGTTGAAATTCCTAAAGTGGTACCTAAAGTTGTTCAGGTGGTAGAAACAGCTCCTAAAACTACACCTAAACCTTTAATAGTAGCAGACACTTCAAGTAAAGTAACTACAAAAATTCTTCCTGTGTCTGAGACTCCCAAGACTATTACTAAGCCGACAGAAAGTGCAAGCAAGGTCCCCATTAAAGTAGTCACACCATTAGAGCCAGTCAGCAAAGCCAGTCCAAAACCTGCTCAAATAGAGGCAACATCAAGTAAACCTACCCCCAAGGCAATTCCACCTCTGGAAACATTGAGTAGAACTGGGATAAAACCTGGCCAGCCTCCAGAGCTATTAAAATTGGGAGCTAAGCCCACTGCACCCACAGTAGAGGTAGTAACAAAACCTGTAGTTAAAGGTACCCCCACAGTTGAGccaataaataaaactgttacAAGTATTGCCAAAGCAAGTACAGGTTTTGTCAAAACACCACCTACCATCACAAAACTTACTCCAGTTGTGTCTGAAGCATCTATAAGTAAATTAAGCAATAAACCAACACCAACACCTGCTGAAACGACAGGAAAATCAAGCCCTAAAACAGTGATAAGTGAGCCTGTAAGTAAAATAGTTACTAAAGCTACTCCATCAACTTCAGAAGTTGTTAGTAAAACTAAAAGTCTGTCTCAAGTTGAACCTCCTCCAAGTAAATCAAAAGCGCCTTCAGTGGTGGAAACACCTTCTAGCAAAGCTACAAGTGTTAAAACCACATTACCTGTGGAGTCAACTACTAAAGTAACTATTAAACCTCCCCCTCAACCACCAATATTAAAGGAAAGTTTGAAAAGAGAAGCTAAAAAAGAACCAAGAAAGAAAGCGTTAAAAAAGACAGTTAGCAAAGAATTTATAGAAGATAGTAGTACAGATTCAGATAGTAGTGAAGAATTAAAACTTGTTATTGATAAACTAGATGAAGAATCAGTACCTGATTCCAGTGATTTAGATTTAGATGTTAAGAAAGATGAAAGTAAGAAAGAGATGCCGATTAAATCGGTAACAAAGAAAGTAGAACAGGAGCCAACACCAAAATCAGAAGCTAAGAAATCTGAACCTGAAAGCAAGAAATCTGCAGAATCTGAGCCTGAAAAGAAGAGacgaaaagaagaagaaataccAGTGAAACCTGTACCTGTAGCTGAAACATCAAAGCGAGCAAAACCTGAAGTtagtaaaaaagaagaagaggaagcaGACAGTAGCCTCAACTCACTACTATGTGAGGAGACAATTCCAGGTAGCCCTGTGCCCCCAGCAGAAGCTCCTCCTCCAGTATGTGAGGAAACTCCAAAAGTACGAGAGATTCCTTTTGCTAGCATGCCTGCAGGCAGTAATGGAGCTAGCACTAGCACTGCTGCTCAGTCACCACAGAAAGCATTTGCATCCAGGTCACAAGATGAGAGTAGCCAACCTGCTGCTGAAGCTAGTGCTCCAGCTAGAGCAGCAGTAGCTGCACCTGCAGGAAAGAAAGAGGAGAATGAGGCAGCGCCAGTCATGGACAATACACCACCTACCACACCAGAGAGCAGTATGTCAACAATATCAGGATCTCCAAGAGAGGACAGAGTTGGAGCATCACCACACCATGAAGAGACCAAATCTCAGAGAGATTCATCAGAAGTGGATCTGGATAGTCCTGCAGAAGCCAACAAGCCAGACGCGTATAGTGAAGactCGCTGCTCAATGTGGAAGTTAGTAGTTCTTGTGATACAAGCAAGTCTAAACCTGGACCTAAAAGAGCTGCAGAATTAGACAAAGACCTGCTTGAGTCACCTAAAAAAAGAAGACGTCCATGCAAGAAAGATGATACACCTACTCAGAAGAGAATGAGGCATTCGTCTGGCCGAAGTGGTAGAACTACTGGCAATGCCAGTGACAGTGATGAGAACTCGGACAACTCTAACCCAGTGCATACTAGTAGCATCTCGAGTACAGACAATTTGTTAGCAAACAGATCACCAAGACCTTCCAAGTATAACTTTTATGTGGAATTAGATCCTGAGTTAGATGGTTCTCAGAGGATAGCACTGCTGCAACATAAGCTAACTGAATTACGTAAAAAGTATATGGAAGTTAAAGCAGAACTCGCATGTATAGATCGTAGAAGAAAGAAGTTaagaagaagagaaagagaagaaaatagtCAACATGTCAACTCAAGTGACGGCAGCATTGCCAAATTTAATATCGCTGAACACCTGCAGCTCCATCAAAGAAAGTTAAATATGGCAATGCTGCAGTCACTTAAGATGATATGTGGACCATTTTCTGAAGAAAGTGGCATCACTTTGATGGGTACATTTAGAATCTAA
Protein Sequence
MLGDDPPYLAVGTEVSAKYKGAFCEAKVRKVVRSVKCRVTFKLGLGTSIVTDDQIKGTLRAGANVEVKHPEKKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSNPVIGGRRGRRSRQAQDDSSDEEETPKKGKKKDEKEADIGKVVCVELGDKKKIKDNWFPGLVVAPTAQDTVRIRVKDDYLVRSFKDGRYYTVPKKEATEFTREIGSKVDNNTLKTAVEKALLFLDKDELPPHWDRELLFGIGESGDSGSDGGSDSESSDDERQEEKDHFVAQLYKFMDDSGTPINKGPTIFDEDLDLYKLFKVVHKLGGYNRVTNQNQWKLVTGKLNLKSLTTVTANHVKQSYKKYLHSFEDFNRKLGCTMVNHPRGSRSRHRSGRSLIRDRDRATPVNTTKLQSDKEKEKPSTSSSASTTPVPPKKQEAEEEKKKSVSKTVKEKEEKVKPKEEKKEVKEPPEDTPKPRRELKMRSERLKLKEEEIAKKKAWQVDDSQSEEEACSSASGSQAKSDAGSRTPSAAETPDVDRVEPKWAGPKVEEEEDESREVPEKRGGDKKEETRERRRPFSERKAEASRAAQEEEEKQNLRSRSKGGVTPERRTRESRTPVRDSEKKMVVRSRIKDEEPPHPPHPPPQPPQPPQPPQPQPQTSAQSSSSSPNPPHPPSQLPKKRGRKRKDSEKSRSGDEPGHVANDVQVQLGDKLKVYYGPSLESKVTYEAKVIEIEEDGSPNMFLVHYTGWNTRYDEWIPRTRIAENLSWTPARAKRSRLQQQQQQQQQAQQQQSSQVKTPKSMRGRPTGRSEGGSAASSQHTRSTTPSSVTSSSSRTKSPAQSSRAQRAASRSEQASVSGGNTSSIELRRRPRRVSGHTDFLNVSEDSDSSEFEEMEVEAMSLRRRRDRQDSESSLRTEVPEPRRLERQAKRRSLKKEKSEEEEEEETEERECDSDSQGLPRRSSRRIRRITESERKEEEQQPSTSSKSEEEQPKGRDFDLNQIRSELKGFDKAVKSPTESVPSETDDKVISPTVKSEPEEPTTPEVTTEKSEEPASTSSAKKDAADTTKAETEDIYEFKEPEPFEFEVRGKRDTPLADKLSKRPVVRLFEDTAEPKKETPKKKTPKKDVKPTPPKVEEPTTSDTEGKKRRRGPAKRLEDEMSEKPSKSKSPSPTKTQTQQQKSDALTASEEAFKKLYENTTFPVLDTQTAAPSSSSQGGTLKSPRTLDLFSDLPEEADEDHGDDEGEDRLVILETDTEPPLFSYPQRHEEMLPTPSSRAPCPTSPEPGKSSDQNKTDMMSLFSFASSKKSDVVKLVVQKAEDEEAQVVERPVPLNDDVMKLFLKDDEDEEEDSINAAIQRVISQSNDEDDVDLFGKSTTSKVTPQASEPKSTPKSVPPESTSKTSKISQASPKLQPVETYSKVLPKILQPVETYSKTTPKSTPVQITDATPKVAQKVVQCVEIPKVVPKVVQVVETAPKTTPKPLIVADTSSKVTTKILPVSETPKTITKPTESASKVPIKVVTPLEPVSKASPKPAQIEATSSKPTPKAIPPLETLSRTGIKPGQPPELLKLGAKPTAPTVEVVTKPVVKGTPTVEPINKTVTSIAKASTGFVKTPPTITKLTPVVSEASISKLSNKPTPTPAETTGKSSPKTVISEPVSKIVTKATPSTSEVVSKTKSLSQVEPPPSKSKAPSVVETPSSKATSVKTTLPVESTTKVTIKPPPQPPILKESLKREAKKEPRKKALKKTVSKEFIEDSSTDSDSSEELKLVIDKLDEESVPDSSDLDLDVKKDESKKEMPIKSVTKKVEQEPTPKSEAKKSEPESKKSAESEPEKKRRKEEEIPVKPVPVAETSKRAKPEVSKKEEEEADSSLNSLLCEETIPGSPVPPAEAPPPVCEETPKVREIPFASMPAGSNGASTSTAAQSPQKAFASRSQDESSQPAAEASAPARAAVAAPAGKKEENEAAPVMDNTPPTTPESSMSTISGSPREDRVGASPHHEETKSQRDSSEVDLDSPAEANKPDAYSEDSLLNVEVSSSCDTSKSKPGPKRAAELDKDLLESPKKRRRPCKKDDTPTQKRMRHSSGRSGRTTGNASDSDENSDNSNPVHTSSISSTDNLLANRSPRPSKYNFYVELDPELDGSQRIALLQHKLTELRKKYMEVKAELACIDRRRKKLRRREREENSQHVNSSDGSIAKFNIAEHLQLHQRKLNMAMLQSLKMICGPFSEESGITLMGTFRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-