Basic Information

Gene Symbol
Ubp1
Assembly
GCA_949318235.1
Location
OX439129.1:27253828-27264239[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-70 4.4e-66 222.7 0.1 23 220 368 560 359 563 0.93

Sequence Information

Coding Sequence
ATGGAATTAATGATAGGCGAAATGGCAGCTATGATGGATTTACATTACCACCGTACGCACCAGCCACAGTTTGCACAGCCCGAGGCATGCCCTCCACCCGCTCAAGGACCCTCGCGTCCTGCCAAAGCTCCCACGTGGGCTGTATCACTGAGTCCTGCCGGATCAAGCGGCTCGTCTGATGACGCTGCAGAGATCTTTCCATGGTCCAATGAGCTGCGACAAGCTCTTCGTTATCGTCTTCAGAGTCAGCACCACCATAGTGACGAGGACGTGAGTCACGTGACACCGCTGGAACCGACCGTGCCGCAATCAGGACTCCCGCCTGGACAAACTCAGTCCTCCGCAGGACGCAAGCGAAAGATATGGGACGATCTTGAAAGCTTGGAAGTGAAATCTTTGCCTGGACAATTAGAAGGAGCTATCGCATTACAACAATTACAAGATTCTGCGCGACCCTTGAGTGCAAGTCACAGTGCTTCACTGCATCACGCGAGCAATGTGCAATTAGATTGTCGCCCACCACTTACACCTCGCTCCGTGACGCGTTTTAGATCCTCTAGGCGGGACCAAGAACAAGGGGCTGCAGGGAGGATGAGCTCTTGGCACGACATTGATGACAATTTAGCAGCAGACTTGGATGGCAGTCTCTCTGGACTGGGAGAAGATCTCAGCACTGCTTCATATAACATGAGTGAAGCTTTGCTTGCTCTACCATCACTAACTGTGTTCAAACAAGAAGCTCCATCCCCAACTTCGCAGACTGATAATACCGGTATCCAGCAATCCTCTCCAAACACTGAAATGGAAAGTGTGGGTGGCAACGGAGGTGAAGATTCTCCTACTACATTGCACCATTTGCTGCATCACCACACTCACCATCACGCTCATCACCACCAGCAACACCATGGCACTGGGGAGCAACACTCTGGGTATCACAGTCCTCCTGGGGAAGGACGTCAACCTAACCACATGCAAGCAAATGAACATACGTCAGGGTGTGGTCCTGGAAATGGACATCATATGAACAGTGGCTCCACAAGTGGTCTCAATGATGGAGGAGGACTTGACCGCTACCAGAGACTGGACAAGCTAAATGATTCAGACATTGGCGAAGATTACAgATTTCAATATGTCCTTGCAGCAGCAACTTCCATTGCCAccaaaattaatgaagaaaCTTTGACATATCTTAATCAGGGACAATCATatgaaattaaactaaaaaaattaggagaCCTATCAGCATATAGaggaaaaatattaaagAGTGTTATTAGAATATGTTTCCATGAAAGACGTTTACAATTCATGGAGAGAGAGAAGCTAGCTGCATGGAGACAGTCTCGTCCAGGTGATAGAATTGTAGAAGTTGACATTCCTCTTTCTTATGGTGTATGGGATGTGGTACAAGATCAAGCACAACTTAATGCCATAGAATTTCAATGGGACCCAACAAAAGAGGTTGGTGTATACATCAagGTGAATTGCATTAGCACAGAATTTACGCCTAAAAAACATGGAGGAGAGAAAGGGGTACCTTTTAGAATTCAAGTTGAAACTTATTCCACTGATGAGGGAAGTATGCGACGACTTCATGCTGCAGTATGCCAAATTAAAGTATTCAAGCTTAAAGGTGCAGATAGGAAACACAAGCAAGATCGtgaaaaaattttgaaacgGCCTGTAGCAGAACAAGAAAAATACCAACCATCATATGACTGCACTGTGTTGACTGATATTCCTGCAGATACTGGCATTTTGTATCCAGTGAGTACATCTACAACAGGTGCTGCTGCACTCAATGGTTCTGGAGCATTTACACCTCCTGAAACTCAGAGAGGAGGAGGCACTCCAACTAGCTTTACCAAGGAAGAGAATTCCCCTTGTGGAGCCACTCCATCAGGAGCATTGCCTGGTCAAGGAGCTCAGCAGCCAGGGAGCAACTCCAATAATGCAGAATTCATCGAAGAGGTTCcacatTACATGGAACCACTTCCGAGTGAAGCAACAGCCTCTCAAACAGCTCAGTGGCTTCAAGCTCATAGATTTGGACATTTCTTGCGTACATTCAATAGTTTTTGTGGTGCCGATATTTTAAGACTATCTCGTGAAGATCTCATTCAAATTTGTGGCCTTGCTGATGGCATACGTCTCTTCAATGCATTACATTCTAAatcTATTGCACCTCGACTTACTCTCTATCTTTGCCTAGAGGGTGCTCCAGTTTTCCATGCATTGTATTTATCTTCACTCCAGTGTTCCGAGATGGTAGCCCGTTTAGCTCAGTTGATGGGAGTGTCTGCACACTCTGTAGCTGATGTTTACTTGCAAGGACCAGCAGGAATACATGTCTTACTCACTGACGAGGTGGTGTGTAACCTCAAAGACGAAACAATGTTCTCAGTTGAAATTTTACAAGaTCCATCTGGGGAACAATATCGCCTTTTACTCAAGACTACAAATGCATAG
Protein Sequence
MELMIGEMAAMMDLHYHRTHQPQFAQPEACPPPAQGPSRPAKAPTWAVSLSPAGSSGSSDDAAEIFPWSNELRQALRYRLQSQHHHSDEDVSHVTPLEPTVPQSGLPPGQTQSSAGRKRKIWDDLESLEVKSLPGQLEGAIALQQLQDSARPLSASHSASLHHASNVQLDCRPPLTPRSVTRFRSSRRDQEQGAAGRMSSWHDIDDNLAADLDGSLSGLGEDLSTASYNMSEALLALPSLTVFKQEAPSPTSQTDNTGIQQSSPNTEMESVGGNGGEDSPTTLHHLLHHHTHHHAHHHQQHHGTGEQHSGYHSPPGEGRQPNHMQANEHTSGCGPGNGHHMNSGSTSGLNDGGGLDRYQRLDKLNDSDIGEDYRFQYVLAAATSIATKINEETLTYLNQGQSYEIKLKKLGDLSAYRGKILKSVIRICFHERRLQFMEREKLAAWRQSRPGDRIVEVDIPLSYGVWDVVQDQAQLNAIEFQWDPTKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQVETYSTDEGSMRRLHAAVCQIKVFKLKGADRKHKQDREKILKRPVAEQEKYQPSYDCTVLTDIPADTGILYPVSTSTTGAAALNGSGAFTPPETQRGGGTPTSFTKEENSPCGATPSGALPGQGAQQPGSNSNNAEFIEEVPHYMEPLPSEATASQTAQWLQAHRFGHFLRTFNSFCGADILRLSREDLIQICGLADGIRLFNALHSKSIAPRLTLYLCLEGAPVFHALYLSSLQCSEMVARLAQLMGVSAHSVADVYLQGPAGIHVLLTDEVVCNLKDETMFSVEILQDPSGEQYRLLLKTTNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-