Eden015406.1
Basic Information
- Insect
- Earota dentata
- Gene Symbol
- stc
- Assembly
- GCA_027574905.2
- Location
- JAODGB020035951.1:1-3213[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2.6 1.8e+04 -3.9 1.6 15 19 354 358 353 358 0.81 2 16 0.091 6.2e+02 0.7 0.4 4 10 387 393 386 393 0.95 3 16 1.9e-06 0.013 15.7 12.6 3 18 401 416 400 417 0.94 4 16 1.5 1e+04 -3.1 0.5 5 10 442 447 442 447 0.90 5 16 0.00037 2.5 8.4 10.0 3 19 455 471 453 471 0.91 6 16 2.2e-09 1.5e-05 25.1 13.3 1 19 511 529 511 529 0.98 7 16 2.5 1.7e+04 -3.8 0.4 6 10 559 563 559 564 0.90 8 16 0.00025 1.7 8.9 14.4 4 19 576 591 569 591 0.87 9 16 1.5 1e+04 -3.1 2.2 5 10 620 625 620 625 0.93 10 16 0.029 2e+02 2.3 6.7 1 11 631 641 631 642 0.95 11 16 0.16 1.1e+03 -0.1 0.6 4 10 646 652 645 652 0.91 12 16 4.4e-09 3.1e-05 24.1 11.0 1 19 658 676 658 676 0.98 13 16 0.046 3.2e+02 1.7 18.5 1 19 715 732 715 732 0.83 14 16 0.4 2.7e+03 -1.3 1.2 8 13 737 742 736 743 0.84 15 16 1.4e-09 9.5e-06 25.7 15.5 1 19 768 787 768 787 0.97 16 16 0.054 3.7e+02 1.5 12.3 3 18 798 815 797 816 0.87
Sequence Information
- Coding Sequence
- ATGATTACGCCAATGGTAGATGTAAGGCACTCCAATCTGCAGGCCACTGCCCAGGAATTCCAACCAGGTGCAATTTATCCTGCTGTGAATCAATCAAGCACAATTGAGCTGCCACCTCCATCGCAGTCTTTGCAACACACTGGTGCTGTGAGACGCAACAATCAGTATGCCAAGAAtgctcaacctcaacctcaacctcaacccCAGCAACAAAGGTCAAAtaatagaaacaaagaaagaaagcCTCCCAAAGAAAAGGAGAAACTAGATAACAATTATACTGAGAGTAGAGATGAACAATTAGAAAGAAAGCAGTCAACTGGACATAACAGGGAAAGGAGGAAAGTGCCAAGAGAGCCCAGTCAAGGGCAAGGGCAAACCAGCTCTTACCAAAGAGAGCGCGAACGTGAAAACGTCAGAGATATTAAAGATAAGGATAGTATGAGAGATCAAGAGCAGACTAATGATGTTGAAACCTATAGGAATGGGGATAGAGATAGAGAAAGGCCGAATTACAGGGATAGGGGGGATTATTATCGAGGCGATGCCTCGGCCGGCACCTCAGACAGAGATAACTTTCGAGAGCGCAAAAGCTATCGCGATAACCGAGTGAATCGGGAAAATACCAGCGATAATCGCGACAACCGCGACAGGGATAATTATAAGGACCACTGGCGATCAGGAAAGAGCTACGAACGTTCATCATTCAAAAATTGGCGTGAACGTCCCAGCAACACTAAAACCTCTGTAAATACCGATGATAAACCGACGCATAAATTTTCTAAGGACTTTAAAGAAGACAAAGCTACCTCGCAAAGCACTTCTTCCAATAACAAAGTATCAAAACATGAGACTTTGTACAAGAAAAAACTCGATGCGGCGTCGCAAAGGGAACGTCTTGAACACATGGTCAATCATCGCATGATCGAATGCCTCGTCTGCTGTGAACAGGTCCGCTCCACTGATAAAGTCTGGTCCTGCAAGCAGTGCTTCCACATTCTGCATCTCAGTTGCGTGCAGAAGTGGGCGAAATCCTCCAAGCTGGAAAGCGGCTGGCGTTGTCCTGCGTGCCAGAATGTCCTAACCGCTGTTCCCACCGAGTATAGATGCTATTGCGACAAGTATGCTGAGCCGAAGTTCGAGCCGGGACTTTTAGCGCACAGCTGCGGCGAAGTGTGTCGTCGTAGTGGGCGCAACTGCGAGCATACTTGCACGTTGCTTTGTCATCCTGGCCCGTGTCCGGATTGCATAGCGATGGTGCCACGCGCATGTGGATGCGGCGCGACTAAAGCCACCGTGAAGTGCAACTCCAACTTGCCGCTGACTTGCGAAGGCGTGTGTAATAAGCTGCTGAACTGTGAGTTGCACACGTGTGCCGAGAAATGCCACTGGGAGCCGTGCAAGAGCTGCACGGAGATGGTGAAGCAGGAGTGCTTCTGCGGCAAGCAGGGCAGGAAGGTTACCTGCGTCGCTGAATTGAAGGGTGCCGAGCATTATGCGTGCGATGACATCTGCGGGAAGGTTTTATCGTGCGGCAATCATAAATGCACGAAGGTTTGTCACTCGGGGGATTGTTCACGCTGCCCGTCGGATCCGGACTTGATTAAGACTTGTCCTTGTGGGAAGAAGAGCTTGAGCATTGGGAGGATATCGTGCCTTGATCCAATTCCATGCTGTGATAAAGTGTGTGGTAAAGTGCTAGACTGTGGCCAACCGAATAAACCTCACCGATGCGAGGAGACTTGTCACAACGACGAGTGCCCACAGTGTCCGGCCACAACGATGGTGCGCTGTCGTTGCGGGCATATGTACAAGGAGATTGCGTGCAGAGACTTGACGACGAAGGCGGACGACGCGCGCTGCCAGAAGAAGTGCACCAAGATGCGCATGTGCTCCAAGCATAAATGCAACCAATATTGCTGCATCGAGGTGGAGCATCGTTGCCCAATGTTGTGCAATCGCAATCTGAGTTGTGGCCTGCACAGGTGCGAGTCGAACTGCCATTCGGGTAGGTGTGAACCCTGCTGGCATACTAGTTTCGAGGAGTTATATTGCGAATGCGGCGCCAGTGTGATTTACCCTCCGGTGCCGTGCGGTACTCGCGCCCCAACCTGCACCAAGCAGTGCTCTCGGCTGCGGCCCTGCGGACATGAACCGCACCATAACTGCCACACCGGCCCGTGTCCACCGTGCACGCTGTTCACGACGAAGCTCTGCCACGGCGGGCATGAGTCCCGCGGCACTATTCCGTGCCATCAGGAGGATTTCAGCTGCGGCATGCCGTGCAACAAGGACATGCCCTGCGGGCAGCACAGATGTATTCAGGTCTGCCATAAGGGGCCTTGTCCGCAGCCATGTAGCCAACCCTGTACGCTGGCGAAGCGAAATTGCGAACATCTTTGTAATCGGCCCTGCCACACACTGCCGTGTCCGACGAAATCGTGCAAGCAGACTGTCGTAACGACCTGTCAATGCGGACTAAGAAGCAGCACTAATATTTGCATGAACATGGTTAGCGAATATCAGAAGATTGCAATGGTGCAGTTGGCAGCCAAGATGGCCGACATGACTCGGGGACAAGCTATTGATATCCCTGATATTGCTAACAAGCAGAAGAAAGGCGGTGCGCATAAGATCTTGGAGTGTACTGACGATTGCCGATTGGTCGAGAGAAACAGACGAATGGCGATCGGCCTGCAAATCCGCAACCCGGACCTGAGTGCGAAGCTCACGCCTCGATACACGGATTATTTAAAGCAGTGGGCGAAGAAAGACCCGCGATTCTGCCAAAGTGT
- Protein Sequence
- MITPMVDVRHSNLQATAQEFQPGAIYPAVNQSSTIELPPPSQSLQHTGAVRRNNQYAKNAQPQPQPQPQQQRSNNRNKERKPPKEKEKLDNNYTESRDEQLERKQSTGHNRERRKVPREPSQGQGQTSSYQRERERENVRDIKDKDSMRDQEQTNDVETYRNGDRDRERPNYRDRGDYYRGDASAGTSDRDNFRERKSYRDNRVNRENTSDNRDNRDRDNYKDHWRSGKSYERSSFKNWRERPSNTKTSVNTDDKPTHKFSKDFKEDKATSQSTSSNNKVSKHETLYKKKLDAASQRERLEHMVNHRMIECLVCCEQVRSTDKVWSCKQCFHILHLSCVQKWAKSSKLESGWRCPACQNVLTAVPTEYRCYCDKYAEPKFEPGLLAHSCGEVCRRSGRNCEHTCTLLCHPGPCPDCIAMVPRACGCGATKATVKCNSNLPLTCEGVCNKLLNCELHTCAEKCHWEPCKSCTEMVKQECFCGKQGRKVTCVAELKGAEHYACDDICGKVLSCGNHKCTKVCHSGDCSRCPSDPDLIKTCPCGKKSLSIGRISCLDPIPCCDKVCGKVLDCGQPNKPHRCEETCHNDECPQCPATTMVRCRCGHMYKEIACRDLTTKADDARCQKKCTKMRMCSKHKCNQYCCIEVEHRCPMLCNRNLSCGLHRCESNCHSGRCEPCWHTSFEELYCECGASVIYPPVPCGTRAPTCTKQCSRLRPCGHEPHHNCHTGPCPPCTLFTTKLCHGGHESRGTIPCHQEDFSCGMPCNKDMPCGQHRCIQVCHKGPCPQPCSQPCTLAKRNCEHLCNRPCHTLPCPTKSCKQTVVTTCQCGLRSSTNICMNMVSEYQKIAMVQLAAKMADMTRGQAIDIPDIANKQKKGGAHKILECTDDCRLVERNRRMAIGLQIRNPDLSAKLTPRYTDYLKQWAKKDPRFCQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -