Basic Information

Insect: Earota dentata
Gene Symbol: -
Assembly: GCA_027574905.2
Location: JAODGB020018160.1:2623-6217[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.044 4.4 8.2 0.2 5 22 378 395 377 395 0.94

2 16 0.022 2.2 9.1 0.8 2 23 402 424 402 424 0.89

3 16 1.8 1.8e+02 3.1 0.6 1 23 449 472 449 472 0.91

4 16 0.001 0.1 13.3 1.6 1 23 563 586 563 586 0.96

5 16 0.0046 0.46 11.2 0.1 1 23 599 622 599 622 0.97

6 16 0.00062 0.062 14.0 2.3 2 23 625 646 625 646 0.97

7 16 2.2e-05 0.0022 18.6 0.5 2 23 688 710 687 710 0.97

8 16 8.6e-08 8.6e-06 26.1 2.7 1 23 770 792 770 792 0.99

9 16 0.074 7.3 7.5 1.1 1 23 803 825 803 825 0.97

10 16 0.00028 0.027 15.1 0.5 2 23 840 862 839 862 0.95

11 16 0.00032 0.032 14.9 0.2 1 23 879 901 879 901 0.96

12 16 0.18 18 6.2 0.1 1 23 941 964 941 964 0.89

13 16 0.00019 0.019 15.6 0.1 2 23 968 990 967 990 0.97

14 16 0.0044 0.44 11.3 0.0 2 23 1008 1030 1008 1030 0.92

15 16 0.00029 0.029 15.0 0.1 2 23 1042 1063 1041 1063 0.97

16 16 0.52 52 4.8 0.0 1 23 1092 1115 1092 1115 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.044	4.4	8.2	0.2	5	22	378	395	377	395	0.94
2	16	0.022	2.2	9.1	0.8	2	23	402	424	402	424	0.89
3	16	1.8	1.8e+02	3.1	0.6	1	23	449	472	449	472	0.91
4	16	0.001	0.1	13.3	1.6	1	23	563	586	563	586	0.96
5	16	0.0046	0.46	11.2	0.1	1	23	599	622	599	622	0.97
6	16	0.00062	0.062	14.0	2.3	2	23	625	646	625	646	0.97
7	16	2.2e-05	0.0022	18.6	0.5	2	23	688	710	687	710	0.97
8	16	8.6e-08	8.6e-06	26.1	2.7	1	23	770	792	770	792	0.99
9	16	0.074	7.3	7.5	1.1	1	23	803	825	803	825	0.97
10	16	0.00028	0.027	15.1	0.5	2	23	840	862	839	862	0.95
11	16	0.00032	0.032	14.9	0.2	1	23	879	901	879	901	0.96
12	16	0.18	18	6.2	0.1	1	23	941	964	941	964	0.89
13	16	0.00019	0.019	15.6	0.1	2	23	968	990	967	990	0.97
14	16	0.0044	0.44	11.3	0.0	2	23	1008	1030	1008	1030	0.92
15	16	0.00029	0.029	15.0	0.1	2	23	1042	1063	1041	1063	0.97
16	16	0.52	52	4.8	0.0	1	23	1092	1115	1092	1115	0.92

Sequence Information

Coding Sequence: ATGACGAACATCTTCGCCGCGAAGAGCCAGCCGGCGGAGCTCATCGAGAAGATCTACTCCGTCATCGGCATCAAGGTCACCAGCCAGGACAACATCACCACCAACCTCTGTGACAAGTGCTTTCTCTATGTGAACAACTATAATAACTTCAAGAATGAGTGCCTCATCAATCAGGTGAAGCTAGCTGAGCAGCTTAGTGTCTTCGAGCATAGTCTTATCAATGATAGTGTACTCATCAAAGATGAGCCACTGTCTGATGATGACGATGTGGTCTATGTGGCTGACCACCAGGACCTGGGCACACCACTGATAGTCAAAACGGAGTCCCTCAACACCTCCGGCTCGCAGGAGTACGATGACGGCCCGCCGATACTGTCGCCGCACCTGCCCACCGCTGAAATGCTCAAGAATCTTGAAGTGCACACTATTGAGCAGGTTGATTGTGATGTGGAGAATTCAGTGGAGACTATTGAGACAATCGAGAGTGCCGCTGTTGAAGTATTGCCAGAGGCAGTTGCACCAGCTGTGGAAACACtagcagttgcagttgcgccagcaccagctccaacagcagtagcagcaggaACAGAAGTTGATAAGGAGTTCCGCGTGCCTGAGTTACCAACACGACGCTCCGGCTCAGGGACAGGACTAACAAACGACTCCCGAGATAAAATCGACTTCGCCGCGGGGCTGAACCTCGCCAAGAAGATGgacaacatcaacatggaGCCGTTCACGCCCACCGAGATCCAGTACCACAAGCGCATGCAGATCATCTACGCGCAGAAGCTCTCCAATCGCTGCGCGTGCCACAACGACCTGAAGTTCAGCTACAAGGCGATGGTGGCGCACCTGCGCAAGTGCGACGGCGTCGTGCTGCCGCCGTTCACCTGCGCGCACTGCTGCACGACGTTCTCGCGCTCGGGCTTCGCGAAGCATCGCTACACCAGCTGCGAGGAGCGGCCGTACGCGAACATGTACATGACGGGCAACGCCGTCGAGCGCGGCATCAACAAGCACCGCAACTATCAGTCGTTCAAGTGCACGCTCTGCGAGGGCTCGATGCGCGTCTTCGAGGCGTACGAGGCGCACCTGGGCGAGCACAGCAAGGGCGCGCCGAGGGCGTGCAAGTGCGGCCGGGAGTTCGGCAGCGCGGCCTCCTTCCGCCAGCACATGCTCACCGCGTGCGTGATGAAGCCCAGCTGCGACATGTGCGACGTGATGTTCGACAGCGCCGACGAGTTCAAGGCGCACTGCCGCCAGGAGCACGACGACAAGGAGGGCGAGACGTTCACGGTGGAGGCGAGCTTCGACCTGCCGGAGCTGCCCTTCGTGCCGCTGTACGCGTGCGTCGAGTGCAATCTGAAGTGCAGGCAGGAGCTGTTCCTCGTCGGGCATTTGCAGCAGGAGCACGGGTATGATTTGCCGGCGGCGAagcgcgtcggcgtcgattGCTACATCGGGCcgcaaaatggcgtcgattTGGATCATGTGGAGCATGTGGAGCATGCGCAGATTGCGCCGACTGCGCAGCATGGCGAGCCGGAGAACAACAACGATGAGCTGCCGCTGCTGGTGCGGATGGCGACGCCACCTCGCGGCGGGAAGCAGAAGAAGGGCATTATCGACGCGGACGAGGCGTTCATGGCGACTTCCTACCGGTTGCTGCCCAAGACCAGCATGTACGAGTGTCGGATCTGCTACAAGCACTTCAGCAACATTCCGAATGTGCGGCGGCACGTCAAGCAGGCGCATTTGAGCGGGCGGTACAACCAGCACCGCTTGAGTATGTTCAGCTGCGGCAATTGCAACACATCGTTCCAGGCGATGGCGGACCTGCAGAACCACCTCATGTCGGCGCATTTGAACACGTGCAAGGAGTGCGGCAAGAAGTGCGAGAGCGCCGACGAGCTGGACAAGCATCGCAGCAGCCACCTGAAGATCTCGCTGACGCGCGACCCCAAGACGCAGAGCTATCGCAGCTCGAGCGGCGGGCCGGAGGCGGAGATGCCCGTGCTGCAGTCGATGGACTCGCAGGACATCAAGGCGCTGCAGATCCAGTGCACGGAGTGCCAGCGGCGgttcgcgacgccgcgcggcctGACGATACACATCAAGCGCAAGCAcgaggcggcgctgcgccgcgagaCGCTGCACGCCTTCCCGCAGCTCTGCCGCCGCAAGGGCTGCCACGTGCTGCTCAAGTCGCACACCGACTGGTCGCTGCACATGCAGCTGCACGCCGAGGGCGAGGCGGCGTCGAGCGACAGCAACAGCCCGGCGCATCCGGACGACACCGACTACTTCACCTGCAACAAGTGCTTCAAGGTGTTCGTCAACCGGGGCAACCTCAAGCAGCACATGCGCACGCACGGCGTGCTGCCCAGCCCGAAGGCGAAGCGCTACTTCTGCTCCATCTGCCGGCACGTGAGCGAGTCGCAGGGCGAGTGGGCGAAGCACAAGCAGAGCCACGCGCCGACGCAGCCAGCGCCCGCTGGCGGCCAGAAGCGCGTCTACTGCAAGTACTGCAAGGTGGCGTTCGCGGACGAGCACTTCCTCAACGCGCACATGCGCGACGAGCACGCAATCGACGAGCGCAAGCCGAAGGAGGAGGCGCTGCCCAAGAGCAAGCACGAGTGCAAGATCTGCGGCAAAATGATGGCGTCGCCCGACAGCCTGCGCGTGCACCTCACCTGGcacaagcgccgcgcgcctttgCAGCCCAGCCTCGCGAGCGAAGACTGCGAGGCGAAGCCCAAGGtcacgccgccggcgaagctCAGCATCAACACGAGCAAGCTCTTCAAGAACAAGACCTTCATCTGCATCACCTGCGGCGAGCTGTTTCCCAGCACCACCGCGCTCACCTCGCACCAGATGGCGAAGCACGGCCGCCTGCGGTGCCCCACCTGCTGGCAGTActtcgagcgcgccgcggagctCACCGAGCACGTGCGCACGATGCACGTGAAGGCGGAGCCGCTGGCGATGAGCAAAAAGCGGAAAAAGAGCTACGAGTACTGCAAGATCTGCGGCGAGGAGTTCGGCGCCGAGGACGAGCTGCGCGAGCACATGGAGGACGCGCACCCCGAGGTGCCCTACCTGCAGAAGGGCGCGTCCGTGTGCCCCATCTGCGACGACAGCTTTAGGAACATGGCGGCGCTGTCCAGCCACCTGCGCATGcacaagcggcgcggcgagaccGCCATCTCGGTGGCGAAGACCAGCGCGAACAACGCCAATGCGCATGTGAACAGAGCGGCGCATAAATTCAACTGCGGCATTTGCAGCCAGGGCTATGACCTTGGCCCTGACCTTCGGAAGCATATTCTGGACGAGCATCCGTTTTAG
Protein Sequence: MTNIFAAKSQPAELIEKIYSVIGIKVTSQDNITTNLCDKCFLYVNNYNNFKNECLINQVKLAEQLSVFEHSLINDSVLIKDEPLSDDDDVVYVADHQDLGTPLIVKTESLNTSGSQEYDDGPPILSPHLPTAEMLKNLEVHTIEQVDCDVENSVETIETIESAAVEVLPEAVAPAVETLAVAVAPAPAPTAVAAGTEVDKEFRVPELPTRRSGSGTGLTNDSRDKIDFAAGLNLAKKMDNINMEPFTPTEIQYHKRMQIIYAQKLSNRCACHNDLKFSYKAMVAHLRKCDGVVLPPFTCAHCCTTFSRSGFAKHRYTSCEERPYANMYMTGNAVERGINKHRNYQSFKCTLCEGSMRVFEAYEAHLGEHSKGAPRACKCGREFGSAASFRQHMLTACVMKPSCDMCDVMFDSADEFKAHCRQEHDDKEGETFTVEASFDLPELPFVPLYACVECNLKCRQELFLVGHLQQEHGYDLPAAKRVGVDCYIGPQNGVDLDHVEHVEHAQIAPTAQHGEPENNNDELPLLVRMATPPRGGKQKKGIIDADEAFMATSYRLLPKTSMYECRICYKHFSNIPNVRRHVKQAHLSGRYNQHRLSMFSCGNCNTSFQAMADLQNHLMSAHLNTCKECGKKCESADELDKHRSSHLKISLTRDPKTQSYRSSSGGPEAEMPVLQSMDSQDIKALQIQCTECQRRFATPRGLTIHIKRKHEAALRRETLHAFPQLCRRKGCHVLLKSHTDWSLHMQLHAEGEAASSDSNSPAHPDDTDYFTCNKCFKVFVNRGNLKQHMRTHGVLPSPKAKRYFCSICRHVSESQGEWAKHKQSHAPTQPAPAGGQKRVYCKYCKVAFADEHFLNAHMRDEHAIDERKPKEEALPKSKHECKICGKMMASPDSLRVHLTWHKRRAPLQPSLASEDCEAKPKVTPPAKLSINTSKLFKNKTFICITCGELFPSTTALTSHQMAKHGRLRCPTCWQYFERAAELTEHVRTMHVKAEPLAMSKKRKKSYEYCKICGEEFGAEDELREHMEDAHPEVPYLQKGASVCPICDDSFRNMAALSSHLRMHKRRGETAISVAKTSANNANAHVNRAAHKFNCGICSQGYDLGPDLRKHILDEHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -