Basic Information

Insect: Earota dentata
Gene Symbol: -
Assembly: GCA_027574905.2
Location: JAODGB020031070.1:1-3454[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00045 0.045 14.4 0.9 1 23 149 171 149 172 0.95

2 19 0.025 2.5 8.9 4.4 1 23 178 200 178 200 0.96

3 19 0.011 1.1 10.1 0.2 1 20 206 225 206 227 0.94

4 19 0.0011 0.11 13.1 0.8 2 21 235 254 234 256 0.90

5 19 0.0019 0.19 12.5 5.6 1 23 327 349 322 349 0.88

6 19 0.00016 0.016 15.8 0.7 3 21 357 375 355 376 0.91

7 19 0.00022 0.022 15.4 0.4 3 23 385 406 384 406 0.94

8 19 0.0002 0.02 15.5 7.5 1 23 496 518 496 518 0.98

9 19 0.062 6.1 7.7 2.7 1 22 524 545 524 545 0.95

10 19 1.7 1.7e+02 3.2 1.1 1 23 552 575 552 575 0.92

11 19 0.06 5.9 7.7 0.1 1 23 716 739 716 739 0.91

12 19 0.057 5.7 7.8 4.2 2 23 746 767 745 767 0.97

13 19 0.0014 0.14 12.9 5.2 1 23 785 807 785 807 0.98

14 19 1.6e-05 0.0016 19.0 1.2 1 23 812 834 812 834 0.97

15 19 1.6e-06 0.00016 22.1 0.2 1 23 840 862 840 862 0.96

16 19 6.8e-06 0.00068 20.2 1.7 1 23 868 890 868 890 0.98

17 19 7.9e-07 7.8e-05 23.1 0.5 3 23 898 918 896 918 0.96

18 19 7.9e-05 0.0078 16.8 2.9 1 23 924 946 924 946 0.99

19 19 0.29 29 5.6 0.3 1 23 951 974 951 974 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00045	0.045	14.4	0.9	1	23	149	171	149	172	0.95
2	19	0.025	2.5	8.9	4.4	1	23	178	200	178	200	0.96
3	19	0.011	1.1	10.1	0.2	1	20	206	225	206	227	0.94
4	19	0.0011	0.11	13.1	0.8	2	21	235	254	234	256	0.90
5	19	0.0019	0.19	12.5	5.6	1	23	327	349	322	349	0.88
6	19	0.00016	0.016	15.8	0.7	3	21	357	375	355	376	0.91
7	19	0.00022	0.022	15.4	0.4	3	23	385	406	384	406	0.94
8	19	0.0002	0.02	15.5	7.5	1	23	496	518	496	518	0.98
9	19	0.062	6.1	7.7	2.7	1	22	524	545	524	545	0.95
10	19	1.7	1.7e+02	3.2	1.1	1	23	552	575	552	575	0.92
11	19	0.06	5.9	7.7	0.1	1	23	716	739	716	739	0.91
12	19	0.057	5.7	7.8	4.2	2	23	746	767	745	767	0.97
13	19	0.0014	0.14	12.9	5.2	1	23	785	807	785	807	0.98
14	19	1.6e-05	0.0016	19.0	1.2	1	23	812	834	812	834	0.97
15	19	1.6e-06	0.00016	22.1	0.2	1	23	840	862	840	862	0.96
16	19	6.8e-06	0.00068	20.2	1.7	1	23	868	890	868	890	0.98
17	19	7.9e-07	7.8e-05	23.1	0.5	3	23	898	918	896	918	0.96
18	19	7.9e-05	0.0078	16.8	2.9	1	23	924	946	924	946	0.99
19	19	0.29	29	5.6	0.3	1	23	951	974	951	974	0.96

Sequence Information

Coding Sequence: ATGGACGGCAGGGAATTAAACTTCACTGAAATATGCCGCTGCTGCAAGCGCCCTGAAGCTGGATTGACGTCAATTTTCGATGGAAATGCTCATCCCACATATCCTCCCGTTGAAGAAATGCTCAGTACTATCGCATCTTTGAACGTGCAAGAAAATGATGGATTACCCTCACTTGTATGCACATCATGCCTTAAAAACATCCAAGATGCTTATACATTTATTCAGCAGCTAATACAGATTGATTCAGAGCTATGGCAAATCCTTGCAAGGAGAAAACGAGCCGACACTCACCATCAAGAAGAAACAAGTGATGAAAACAATGTTGATAATGCAAATCGAGATATAGGTAACTTTTTAAAGTCATTATTGATTCCAAACAAGACATTAGAATCTGAGGTGAAGGAAAATGACTCTGCTCATGCACTAACAGCAAAGAAAGCTAAATATGCCTGTGATCAATGTGATAAATCCTATGCAATATTGAAATCATTACAAACACATGTTAGAGATCATCATTGCTTTGCAACCATTTATGAGTGCAAACTGTGCCATGCAAATATTTCCTACAAGCAGCACTTGCAAAGGCATTTATATCTTCATCTCAAAGAGAAACCATTTGTTTGCAACCAGTGTAAGATGGGCTTCAATCGCATGAACAGATTGATTAAACATCAGGCTGTGTGCAAAGGTGATGCTTCACTCACGTGTGAAATCTGCAATCGCCGCTTCACTGTGAAGACGTCACTTGAGCTGCACAAGGGTTTCCACGACAGTGAAGATGTAAATCGCTCGTTAACGTTGGAGGACCTGGAGGAGCCAATGCAATTTTTTGAGCAACATGGCATTGATGATATTATTGATAATCAAGATATAGCAAAAATTGAAGTGGAAGTTGATCTTGGTCCTGCGCCTGAAGATTTTAACGAATTACCGGACCAGGAACAGCAGGATCAGCAAAAACTTCACACTTGCAGAATTTACAATTGCATCATTTGCgggcttaaatttaaacgaatGTATCATTTGAAGCGACATTTGCTAGTGCATTGCAAGGATAAAGCGTTAGCGTGTTCGCAATGCAATCGCACCTTTAACAGGAAAGATAAGTTGGAGAAACATTCAAAGATATGTAAAGGTGTGGAACAGCTACTTTGTGAGGTGTGCAACAGGGTGTTCAAAACTGCAGAAAGTCTTGAAActcacaaaacaataaaacaccgCTTTGTATCTAAATCGCCTTCTATAACTCTTGAAgatattcaattaaatctTCAGAAATACTACACGGAATCGTACGAGGATGCTAATGAAACGAACgctctaggtctaggtcttGCATCAGCTGATGATGATACAAATGAATCAACTTGTCAGGACGCTCcagaaaatgttgaagaagcagaagaagtgGATTCAGATGAGATTCCTCTAGAATCACTCGCAAAACGACGGAAAACGAAGTCAAATGATGACAAATTTGAAGTATACAACTGTAAACTATGCGACTTTACCTGTTCGCGTTTGTATCATTTAAAAAGACACTTGCAAACGCATCTTAAGGACAAACCATTCGCATGCTCAAAATGTTGTCGCACATTTGCACGCAGAGATAAGATGCTGCGGCATTGGCGGACCTGCGGAGGCGAGGCACGATTCGTTTGTGAGTTTTGTAACATTGGTTGTCACTCGGAGCTGAAACTCGAGGATCACATAGAAGCATATCATGCTGATGAAGAGGAAAAGTCATCAAACCAGCTGATATTAAATCTCGAAGAGCTGAGGGATCCGGAGAAGATAAAGAAGTACTACACCTACAGTGTCAATGAAAATGTGAGAAATGACGTGGAGCTCAATGAAGATGAtgaattgttaaaaattgagAGAGCTGAAGACCTGAAGGTTGTTAAAAATGCAGAAGAGGATAATCAAGTAGACAATGAAAACTTTAACAGTGTTGATTCATCAGATGGTGATTACAGTCCATATGGAATAAGAAGAAAGTCCAGGAAATTTAAAGGCCGCGGCCCAGGACGACCTCCTAAATCCAAAGTAAAGGCGAAATCAAAGGTAAACGTTAAAACGAaagctgaaactgaaagtAACGACGTTAAAGATGAACCCTCAGACGATGATGAACTAAAATCATTTACTTGTATTGTTTGCAACCAAATGTTCGAACAAATATCGCTCCTCGAAGCTCACGGAAAGGAATTCCATGAACAGGAGAACGTGTTACAGTGCAGGAAGTGCAGCGATACATTTCAGCGCGTTTGCGAACTGAATCAGCACATGCGCAAGCATAAAAACCAAAGCATGGACGCGGTGCAAGAGCGACTCAAGCGACCAAAGCGCTTCGAATGCAATCACTGCCTGAAACGCTTCACAACGCAGCAGGCAATGCGTCAGCATTCAAAGAAGCACAAAGAGGGTGGCTTCGTGTGCCCAAAGTGCTCCAAGCCGTTCCTCTCGAAGAGCAACCTGACCGAGCATATGAAGTTCCATGGAACGACGAAGAAGTTCTTGTGCTCCGAGTGCGGGCAAGGGTTTGTGCGGaatgattatttgattattcaCATGCGGCGACACAGCGGCGAAAAGCCTTTCAAGTGTAGCCATTGTGGCAAAGGTTTTCCCCGAGTTACAGATCTTAAAGTGCATGAGCGATATCACACGGGGGAGAAGAAGCATCTTTGTGTCGTTTGCGGAAGAGGATTTATCAGAGCGTATAATTTAACAGTACACATGCGAACAcacaccggcgagaagccCTACAAGTGTCAGTACTGCGACTCGGCGTTCGCGCAGTGCAATGATCTGAAGTCGCATGTGCGACGACATACTGGCGAACGCTTCCAGTGCGACTTGTGCCCCTTGAACTTCCTAATGGGCTACGAACTAATCCAACATAAACGCAAAGTTCACGGTAACAACtctcaatatttcaaacatCTCTCAATACCACCGCCTTTTTCATGTTTAGGCATGAATATTGTAAGCAATATTCGTCGACTAAACACCGCAGACGCGCAGCACGACGGGGATGCTGAGGAACCAGAGACGGTGGCCCTTCCCCAACCTGTGATACCCATGGGTTCAGATCTTGATCCTTTAGATG
Protein Sequence: MDGRELNFTEICRCCKRPEAGLTSIFDGNAHPTYPPVEEMLSTIASLNVQENDGLPSLVCTSCLKNIQDAYTFIQQLIQIDSELWQILARRKRADTHHQEETSDENNVDNANRDIGNFLKSLLIPNKTLESEVKENDSAHALTAKKAKYACDQCDKSYAILKSLQTHVRDHHCFATIYECKLCHANISYKQHLQRHLYLHLKEKPFVCNQCKMGFNRMNRLIKHQAVCKGDASLTCEICNRRFTVKTSLELHKGFHDSEDVNRSLTLEDLEEPMQFFEQHGIDDIIDNQDIAKIEVEVDLGPAPEDFNELPDQEQQDQQKLHTCRIYNCIICGLKFKRMYHLKRHLLVHCKDKALACSQCNRTFNRKDKLEKHSKICKGVEQLLCEVCNRVFKTAESLETHKTIKHRFVSKSPSITLEDIQLNLQKYYTESYEDANETNALGLGLASADDDTNESTCQDAPENVEEAEEVDSDEIPLESLAKRRKTKSNDDKFEVYNCKLCDFTCSRLYHLKRHLQTHLKDKPFACSKCCRTFARRDKMLRHWRTCGGEARFVCEFCNIGCHSELKLEDHIEAYHADEEEKSSNQLILNLEELRDPEKIKKYYTYSVNENVRNDVELNEDDELLKIERAEDLKVVKNAEEDNQVDNENFNSVDSSDGDYSPYGIRRKSRKFKGRGPGRPPKSKVKAKSKVNVKTKAETESNDVKDEPSDDDELKSFTCIVCNQMFEQISLLEAHGKEFHEQENVLQCRKCSDTFQRVCELNQHMRKHKNQSMDAVQERLKRPKRFECNHCLKRFTTQQAMRQHSKKHKEGGFVCPKCSKPFLSKSNLTEHMKFHGTTKKFLCSECGQGFVRNDYLIIHMRRHSGEKPFKCSHCGKGFPRVTDLKVHERYHTGEKKHLCVVCGRGFIRAYNLTVHMRTHTGEKPYKCQYCDSAFAQCNDLKSHVRRHTGERFQCDLCPLNFLMGYELIQHKRKVHGNNSQYFKHLSIPPPFSCLGMNIVSNIRRLNTADAQHDGDAEEPETVALPQPVIPMGSDLDPLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -