Eden019348.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Earota dentata
Gene Symbol
ZFX
Assembly
GCA_027574905.2
Location
JAODGB020043841.1:2356624-2361065[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.4 39 5.2 5.2 1 23 10 32 10 32 0.98
2 24 0.00043 0.043 14.5 0.1 3 23 39 59 38 59 0.96
3 24 0.0058 0.58 10.9 0.8 1 23 65 87 65 87 0.97
4 24 0.00015 0.015 15.9 0.5 2 23 102 123 101 123 0.96
5 24 8.6e-06 0.00086 19.8 4.2 1 23 148 170 148 170 0.98
6 24 2.3e-05 0.0023 18.5 1.5 1 23 176 198 176 198 0.95
7 24 0.00024 0.024 15.3 0.6 1 23 204 227 204 227 0.96
8 24 0.0081 0.81 10.5 4.7 1 23 237 260 237 260 0.96
9 24 3.3e-06 0.00033 21.2 0.7 1 23 342 364 342 364 0.96
10 24 3.5e-06 0.00035 21.0 0.3 1 23 370 392 370 392 0.99
11 24 5e-05 0.005 17.4 1.4 1 23 397 419 397 419 0.99
12 24 0.00069 0.068 13.8 0.3 1 23 431 453 431 453 0.98
13 24 5.9e-05 0.0058 17.2 2.0 1 23 506 528 506 528 0.98
14 24 0.00045 0.045 14.4 3.1 1 23 534 556 534 556 0.97
15 24 9.1e-07 9.1e-05 22.9 0.8 1 23 562 584 562 584 0.97
16 24 0.0066 0.66 10.7 5.9 1 23 590 612 590 612 0.97
17 24 0.0009 0.09 13.5 1.5 2 23 867 889 866 889 0.92
18 24 0.012 1.2 10.0 8.8 1 23 895 917 895 917 0.98
19 24 1.4e-05 0.0014 19.2 0.6 1 23 923 945 923 945 0.99
20 24 4.3e-05 0.0043 17.6 1.5 1 23 953 975 953 975 0.98
21 24 3.5e-05 0.0035 17.9 1.1 1 23 981 1003 981 1003 0.97
22 24 6e-05 0.006 17.2 1.8 1 23 1111 1134 1111 1134 0.98
23 24 3.4e-05 0.0034 17.9 1.0 1 23 1137 1159 1137 1159 0.99
24 24 0.00056 0.056 14.1 2.3 1 23 1165 1188 1165 1188 0.97

Sequence Information

Coding Sequence
ATGAAGAAGCATCAAAGCCCCAAGAAGTATCAATGCAAGTTTTGTACACAAAGCTACAACAAAGAAGTGAATTATAAATGTCACATGACTGTACATAATACTGGCCCTCCAATGTGTCCAGTGTGTGatagaaaatttcaaagaattgCAAGTCTGAAAGCACATTTAGTTGTGCATGAAGTTGAAGAAAGCTACAGTTGCTTGCATTGCAAGGCAGAGTTTGAAAAGGAAGAAGAATTATATAGGCATTTAGATGTGCATGAGGGTGAGAATATTGAAATACCTCATCAGGATGCACCTTTgcaatgcaattattgcaattatgtCTTTGGTGATGTTGACAAGTATAAAAGACATATACAGTTGCACATTCAGGCAAAGAAGATTGTTAACAGTGGTAAATGTCGCTTGAAACGCAAAGGACGAACGAGAGAATATGCGCACAAATGCAAGGACTGCGGGAAAAGTTTTCCAAAAATATGTCTGTTGGAACGACACCAGAGGATTCATACAGGAGAAAAGCCATTTCTGTGTACAATTTGTAAGCGCGGCTTTTCACAAAAAAGCGCCCTCAGCATCCATCGTAAGCGACATGAAGGTCACAAACCACATGAGTGCATGTTTTGCCCCGCTAGATTCGTGCAAAAAGGCAATCTCATTGCTCATCTACAGAAAACGCACACTTCGACGGAACCCGATGAAAAGGTTTACAAATGCACGCATTGCACGTGCGTTTTCAAAAAGATCTCTAGTCTCAACGGTCATGTAACGAGAGTGCATGCGAATGGCGCGCAGGATAATGACGATATTATGACTGTTATATCACAGCTGAAGGAGTTGGATAGACAAACTGCCCCTTCCATACAGGAACAACTTATTAATGTACCTGTTGAACAACAGCATGCAGAAACGCTTGAAACGCCGCTTATGCAGATTTCTTACGTGAAGATTGCAGATAGTAGCATAAATGGTGTCATCAAAACGTATATGATTAAACAGAGGACTGTTAATGAGCACAGGTGGTATTTATGCTCTTCATGTAAAAAGGAGTTTAAGAAGCCTTCGGATTTGATTCGccacattcgcattcacacGAAGGAAAAACCGTATAAGTGTCCTGAATGTGATTTACGCTTTGCTCAAAAGTCCACTGTAAATAATCACTTGGCGACGCATCGGAAAAATGAGTTTCAATGCGAGATATGCAAGAAGAACTTTGGTTCCATGCGGTctttaaatgtacatttaaagAAACATTATCCATCAGCCGTAGCACGTAAAACCGATTGTTATAAATGTTCCGCGTGTGATAAGACCTTCGATTCAATGGAAGCGGCAAAGATACACATGAAACTCCATGAAGTGCCTGATGATAGTTTACTTCTGCTGGAGAAAGCACCAGAACAATCGCAAATGTTGCAGCCGTTGATTGAAACAGACCAAGGATTATGCGCACTACCGCCACCGAAGTCAAAAATTCCACTCGCGACACTTGAAGAATACAGCAATCGGCCGTTTAAATGTCACGTATGCAATGCTGCTTTTGGCCGCGGCGCTCATTTGAGGAAACACATGGCGCGACATTGTACAAAGAAGGATTTTACATGCTCAGTTTGCTCCAAGCAATTTGTGACGCACTCTGCATTGAAGGAACACTTCATGTATCACAAGCGAGCTAAAACACATTCGTGTACAGAGTGCAATAAGGCATTCATCAATGCGAGTATGTTGCAGAGGCATATAATATCGCACAGGGCTGTGTGGCCCTTTATATGCCCCTATTGTAAGAAGCGATTTAGAGCGAAGGAGCACTGCCGAAAGCACATTGCAAGACATAACATATCCAGCTCAACAATGgcAAAAGATCAGGATATACCCCAAATACAGCTGcaatatatttacaatattaatgaCATTCAACTTCTGGAACAAGTGGAGGATAATGGGCTTAGTTCTGAAATTAAGTTACAAGCATTGCAAGGTTCTGAATCTGTGTTACTAAATTCAATGACAGATCTTCAAGGGGCATCACACTATGGTCAAAATATTGTTCTTGGCCAGGATGGCCAAATAAGCATAAATCATGATACTTTCAATccaaatgtatttatttcgaATTACAATGAACTGGACATTGCGCCAGCGTCAACGCATGTCGAGGAGTATGCGAATTCTTCTACGATAACTGAAGATCATACagtacaaattgaattaaatccGGACGGAACTATAACGGATAAAATTAATGATctagaaatgaaattgatgcAGAATAATCTAATACTGGAGAATGTGCCTATTGGGAATGAAATATCGGCGAAagatttaaattcatttaatattACACTTCGTGATTTTTTGGATGTGCGACCTATTAATTTACCACCGGAGGAACCTGAAGAGAACGTTCAAATGGATGCGTTGTTCATGTGTGCCAAATGTCCTTTGGAAGTACCGCATGTTTGTCCAGTGGAGAATACAGATACTTTAACAGACACAGGGGAGAGTAGTGAGATTCAACAAAATACTGAGGTTGACGATCAGTTACCAGTGGACGGTGTTGTTGCGAACGTTGAGGATGAAACACAGGAGTTATTATCCTGTGCGACTTGTCCCAAGAAATTCACTGATGAACACCGGTTGAATAGGCATATTTCAGCGAAgcataaacattttattgatcaCACATGTCAGTACTGCTGTAAGAAGTTCAAAAAGAAATCTGATATGGATAGACACATACGAACACACACTGGCGAAAAGCCATTTACATGCTCAAGTTGTGACAAAGCATTCGCAATTAAATCGACACTTGTCTCACACCTACGCACGCATAATCCAACCGAAAGTAAGGAGTTTCAATGCCAAGTGTGTAGCTCGCGCTTTAGCACCACGAAGAGTCTGAAAGCTCACATGCAGGTGCACGTTGATAAGAATCCGTTTCGATGCGAGCTTTGTAGTAAGCCATTCAAGCGTCGTCAGCATATGATCGCGCATATGGCAGCGCACGAAAGCCGACCGAACAAAACTTCGAAGATGAATGCCGTGAATTTTCTGCAATCATTTGTTtatgaaacaaatgataaaattcATGAAGAGCAACAACAAATTGTGGAAGCCACGGAGGAGCAGATTGCTACAGAGCATCTGTTCTCACAGGAGCTCACTGCGTTTGGCGATAACATGGATCCTGTTACAATCACACTAGCTTACAATCCCACATTGCCATTTAAAATTGACGATAATCTTGTAATATCAAACGCAAGTGATAAAACTGATTATTTCATTCCGGGAGCTGAGTATGACCAGGTGCCTGCCAAAGAGAAGAAATTTCAGTGCGAcatgtgttttaaatattacgtCAGCAACTCAGTTTTGAGAAAGCATCAACGAACTGTACATGGCGACTATAAGTGTGATAAGTGTAGTAGAGCCTTCAATTCGATGGAGCTTTTGGAAAAGCACTATATTACACATGATGGACATCGACCGTTTAGTTGTACGTTGTGTACAAATAGTTTTTCGACTCGTGCTAGTCTCAAAGTTCATTTCAAAAGAATGCATAATGGAGTGGATATCGATGAGATTGttacgttttaa
Protein Sequence
MKKHQSPKKYQCKFCTQSYNKEVNYKCHMTVHNTGPPMCPVCDRKFQRIASLKAHLVVHEVEESYSCLHCKAEFEKEEELYRHLDVHEGENIEIPHQDAPLQCNYCNYVFGDVDKYKRHIQLHIQAKKIVNSGKCRLKRKGRTREYAHKCKDCGKSFPKICLLERHQRIHTGEKPFLCTICKRGFSQKSALSIHRKRHEGHKPHECMFCPARFVQKGNLIAHLQKTHTSTEPDEKVYKCTHCTCVFKKISSLNGHVTRVHANGAQDNDDIMTVISQLKELDRQTAPSIQEQLINVPVEQQHAETLETPLMQISYVKIADSSINGVIKTYMIKQRTVNEHRWYLCSSCKKEFKKPSDLIRHIRIHTKEKPYKCPECDLRFAQKSTVNNHLATHRKNEFQCEICKKNFGSMRSLNVHLKKHYPSAVARKTDCYKCSACDKTFDSMEAAKIHMKLHEVPDDSLLLLEKAPEQSQMLQPLIETDQGLCALPPPKSKIPLATLEEYSNRPFKCHVCNAAFGRGAHLRKHMARHCTKKDFTCSVCSKQFVTHSALKEHFMYHKRAKTHSCTECNKAFINASMLQRHIISHRAVWPFICPYCKKRFRAKEHCRKHIARHNISSSTMAKDQDIPQIQLQYIYNINDIQLLEQVEDNGLSSEIKLQALQGSESVLLNSMTDLQGASHYGQNIVLGQDGQISINHDTFNPNVFISNYNELDIAPASTHVEEYANSSTITEDHTVQIELNPDGTITDKINDLEMKLMQNNLILENVPIGNEISAKDLNSFNITLRDFLDVRPINLPPEEPEENVQMDALFMCAKCPLEVPHVCPVENTDTLTDTGESSEIQQNTEVDDQLPVDGVVANVEDETQELLSCATCPKKFTDEHRLNRHISAKHKHFIDHTCQYCCKKFKKKSDMDRHIRTHTGEKPFTCSSCDKAFAIKSTLVSHLRTHNPTESKEFQCQVCSSRFSTTKSLKAHMQVHVDKNPFRCELCSKPFKRRQHMIAHMAAHESRPNKTSKMNAVNFLQSFVYETNDKIHEEQQQIVEATEEQIATEHLFSQELTAFGDNMDPVTITLAYNPTLPFKIDDNLVISNASDKTDYFIPGAEYDQVPAKEKKFQCDMCFKYYVSNSVLRKHQRTVHGDYKCDKCSRAFNSMELLEKHYITHDGHRPFSCTLCTNSFSTRASLKVHFKRMHNGVDIDEIVTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-