Basic Information

Insect: Earota dentata
Gene Symbol: -
Assembly: GCA_027574905.2
Location: JAODGB020002786.1:54689-58168[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.8e-05 0.0018 18.8 2.1 1 23 373 395 373 395 0.97

2 18 6.2e-05 0.0061 17.1 0.8 1 20 401 420 401 423 0.94

3 18 5.2e-06 0.00052 20.5 1.3 1 23 429 451 429 451 0.98

4 18 1.1e-05 0.0011 19.5 4.4 1 21 457 477 457 479 0.95

5 18 1.9e-05 0.0019 18.7 4.6 1 23 485 507 485 507 0.99

6 18 1.9e-05 0.0019 18.7 5.3 1 23 513 535 513 535 0.97

7 18 1.9e-07 1.9e-05 25.0 5.0 1 23 541 563 541 563 0.98

8 18 7.2e-08 7.1e-06 26.4 2.7 1 23 569 591 569 591 0.98

9 18 5.3e-05 0.0053 17.3 6.7 1 23 597 619 597 619 0.97

10 18 6e-06 0.0006 20.3 5.6 1 23 625 647 625 647 0.97

11 18 3.4e-07 3.4e-05 24.2 2.8 1 23 653 675 653 675 0.98

12 18 4.8e-06 0.00048 20.6 7.9 1 23 681 703 681 703 0.98

13 18 2e-05 0.002 18.6 9.1 1 23 709 731 709 731 0.98

14 18 1.2e-05 0.0012 19.3 7.7 1 23 737 759 737 759 0.98

15 18 8e-06 0.0008 19.9 7.1 1 23 765 787 765 787 0.97

16 18 2.9e-05 0.0028 18.2 0.8 1 23 793 815 793 815 0.98

17 18 0.064 6.4 7.6 5.0 1 23 825 847 825 847 0.98

18 18 1.2e-06 0.00012 22.5 0.8 1 23 853 875 853 875 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.8e-05	0.0018	18.8	2.1	1	23	373	395	373	395	0.97
2	18	6.2e-05	0.0061	17.1	0.8	1	20	401	420	401	423	0.94
3	18	5.2e-06	0.00052	20.5	1.3	1	23	429	451	429	451	0.98
4	18	1.1e-05	0.0011	19.5	4.4	1	21	457	477	457	479	0.95
5	18	1.9e-05	0.0019	18.7	4.6	1	23	485	507	485	507	0.99
6	18	1.9e-05	0.0019	18.7	5.3	1	23	513	535	513	535	0.97
7	18	1.9e-07	1.9e-05	25.0	5.0	1	23	541	563	541	563	0.98
8	18	7.2e-08	7.1e-06	26.4	2.7	1	23	569	591	569	591	0.98
9	18	5.3e-05	0.0053	17.3	6.7	1	23	597	619	597	619	0.97
10	18	6e-06	0.0006	20.3	5.6	1	23	625	647	625	647	0.97
11	18	3.4e-07	3.4e-05	24.2	2.8	1	23	653	675	653	675	0.98
12	18	4.8e-06	0.00048	20.6	7.9	1	23	681	703	681	703	0.98
13	18	2e-05	0.002	18.6	9.1	1	23	709	731	709	731	0.98
14	18	1.2e-05	0.0012	19.3	7.7	1	23	737	759	737	759	0.98
15	18	8e-06	0.0008	19.9	7.1	1	23	765	787	765	787	0.97
16	18	2.9e-05	0.0028	18.2	0.8	1	23	793	815	793	815	0.98
17	18	0.064	6.4	7.6	5.0	1	23	825	847	825	847	0.98
18	18	1.2e-06	0.00012	22.5	0.8	1	23	853	875	853	875	0.96

Sequence Information

Coding Sequence: ATGAACGCGGAGGGCTCGCAGGCGCTTCCTGCACATGCAAACAATGGGAACAATGAAGGCTCCACCAGGTCGCAgaccgccaccaccaccgccgtcACCGATTTGCGCGTGAACACGACCGCCCTCAACGCCGTCGCGCTCAGCTCCGTCGCCAAATACTGGGTGCTGACCAACCTACTGCCCGGACCAATACCACAAGTGTCTGTTTACGGATTGCCTGGATCCGCCGCACGCAACGACAACCAAAAGCTATCTCAAGACTCCACTGTGACCCAACATGGTGTTGGAGGTTTGATCCAGCCGGACAACATTCTCCTCTCACACAATGCTAATCTAACTGTGCCTACAAGTATGCACTTGGACACCCCAAACAGCCAATTGAACAATCATCAGGTAGTAACCAATCAGCAGCACGGCCAGCTGCAGGCCCAGCCCAATATGGTGCAGGTGCAAGTGCAGGACAACATGGTGTCGGTGATCGACGATAATAAGGAGCACAAGGAGCTCGCCACGCACCTCGCGCAGGCCCAGCTGCACATCCAGGGCGAGGGCGGCAACCAGCTGCCGCCGCAGGCGATGTCCGTACAGCACCTGCAACAGCTGCAGGTGCAGCAAGTGCTCGACAACGTCGTGCGCATGGAGACGTCGGAGGCGCCGaacgcggccgccggcggcgacgagcaGATGCACGACATCAAGGACGAGAAGGCGCTGCAGAGCGCGACGAAGTTCCTCTCCGCGCAGTTCGGCCTGCAGGACATCAAGCCGAACCTGATGGACGTGCGCACGGCGGACGGCAGCATCGTGAAGATCTCCACCGGCCTGCCCGACCAAGACCTCGCCAAGACAATCGGCGTCGAGATGGTGCAGAACATGTTCAAGGTGAACGTCGACGACTTCAATCAGCTGCTGGCATACCACGAGGTCTTCGGCAAGATACAGACTGAGCCCGCGCCCGGCACGCTGGTGCAGGCCGGACAGAACCAGCAGGGCGTCAATTTGCAGGCGGGCGTTGTCAATAACATCGCCGCCGTGCCCAAAGTCCTAGAGAATGATCAAGAGGCTTCCACTAGTGGAATCAACTCTGAGAATTCACCTACCATTATTGCAGGCACACATGTTTGTGATATCTGTGGAAAAATGTTCCAATTTCGTTACCAACTAATAGTCCATCGTCGTTACCACACAGAACGCAAGCCGTTCACGTGCCAGGTGTGCGGCAAGGCGTTCCCGAACGCCGCGGAGCTGAGCCGGCACGGCAAGTGCCACCTGGGCGGCAGCATGTTCACGTGCAGCGTGTGCTTCCACGTGTTCGCCAACGCCGCCTCGCTGGAGCGGCACATGAAGCGGCACTCCACCGACAAGCCGTACAACTGCACCGTGTGCGGCAAGTCGTTCGCGCGCAAGGAGCACCTGGAGAACCACACGCGCTGCCACACCGGCGAGACGCCCTACCGCTGCCAGTACTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTGATGTGGCACACCGGCGAGACGCCGCACCAGTGCACCATCTGCGGCAAGAAGTACACGCGCAAGGAGCACCTCGCCAACCACATGCGCTCGCACACCAACGACACGCCGTTCCGCTGCGAGATCTGCGGCAAGAGCTTCACGCGCAAGGAGCACTTCACGAACCACATCATGTGGCACACGGGCGAGACGCCGCACCGCTGCGACTTCTGCTCGAAGACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGCGGCTACTGCTCGAAGAGCTTCACGCGCAAGGAGCACCTCATCAATCACGTGCGGCAGCACACGGGCGAGACGCCCTTCCGCTGCAGCTACTGCCCGAAGGCGTTCACGCGCAAGGACCACCTGGTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACAAGTGCACCTACTGCACGAAGAGCTTCACGCGCAAGGAGCACCTCACGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCATCGCTGCCACTTCTGCTCCAAGAGCTTCACGCGCAAGGAGCACCTCACGAACCACGTGCGGATACACACCGGCGAGTCGCCGCATCGCTGCGAGTTCTGCCAGAAGACGTTCACGCGCAAGGAGCACCTCACCAACCACCTGCGGCAGCACACCGGCGAGACGCCGCACTGCTGCAACGTGTGCAGCAAGCCGTTCACGCGCAAGGAGCACCTCATCAATCACATGCGCTCGCACACCGGCGAACGCCCGTTCAGCTGCAACGAGTGCGGCAAGTCCTTCCCGCTGAAGGGCAACCTGCTCTTCCACCAGCGCTCGCACAACAAGGGCGCGCAGGCGGAGCGCCCGTTCCGCTGCGACCTCTGCGAGAAGGACTTCATGTGCAAGGGGCACCTCGTCTCGCATCGGCGCTCGCACAGCGGCGAGCGGCCGCACGCCTGTCCCGACTGCGGCCGGACGTTCGTCGAGAAGGGCAACATGCTCAGGCATCTGCGGAAGCATCAGCAGGAGCTGCCCGCCAATGCGGCGCCCATCGTGGAGATACAAATCCAGCAGCCGCCGATCTCGGTGTCGACGAGCGCCGCCAGCATGCAGGCGCAGGCGACGCAGGCCGGCGCGATGTCCTCGGTCGCCGGCGGCTCGATACTGCAGCAGACGCTGATGCACCCAGCGAACGCGCACCCCGTGCCCAGCGTGCCGACGGCCAACGGCAACGTGCTGGCGACTTACTGA
Protein Sequence: MNAEGSQALPAHANNGNNEGSTRSQTATTTAVTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGSAARNDNQKLSQDSTVTQHGVGGLIQPDNILLSHNANLTVPTSMHLDTPNSQLNNHQVVTNQQHGQLQAQPNMVQVQVQDNMVSVIDDNKEHKELATHLAQAQLHIQGEGGNQLPPQAMSVQHLQQLQVQQVLDNVVRMETSEAPNAAAGGDEQMHDIKDEKALQSATKFLSAQFGLQDIKPNLMDVRTADGSIVKISTGLPDQDLAKTIGVEMVQNMFKVNVDDFNQLLAYHEVFGKIQTEPAPGTLVQAGQNQQGVNLQAGVVNNIAAVPKVLENDQEASTSGINSENSPTIIAGTHVCDICGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFPNAAELSRHGKCHLGGSMFTCSVCFHVFANAASLERHMKRHSTDKPYNCTVCGKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCNECGKSFPLKGNLLFHQRSHNKGAQAERPFRCDLCEKDFMCKGHLVSHRRSHSGERPHACPDCGRTFVEKGNMLRHLRKHQQELPANAAPIVEIQIQQPPISVSTSAASMQAQATQAGAMSSVAGGSILQQTLMHPANAHPVPSVPTANGNVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00904250;
90% Identity: iTF_00620708;
80% Identity: -