Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027574905.2
Location
JAODGB020010545.1:1350-6375[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.9e-19 2.4e-15 56.9 0.0 20 89 4 69 1 69 0.92
2 3 5.1 1.7e+04 -3.6 0.0 48 63 943 958 941 968 0.76
3 3 1.1 3.7e+03 -1.4 0.0 32 78 1162 1207 1141 1214 0.64

Sequence Information

Coding Sequence
GGCTCCTCGCTGAAGATCCCGATGGTGGAGAAGCGCGCATTGGATCTCTACACACTGCACAGGCTGGTGGAGAACGAGGGTGGCTTCGTGCCGGTGACCAACGGGCGGAAGTGGGCGAAAATCGCCGTGCACATGGGATATCCACACGGAAAGGGCACCGgaactattttaaaaacgcattatGAACGATTACTCTATCCGTATGAGGTTTTTACAAACGAGAAGAAGAAGCCTGGTGAGACCCTGGAGGACCTTCTCGAAGCCAAGGATGACGATTACAAACCGCCGGTCAACTGCAACTCGGCGACTGGCAGCCCGAAGAAGAACGGCGTCATGAGACGCTCGCTGAAAAGCGCAAGCGCTGAGAAGAGCAAAGATCGCAAGTGCAAAAGCAACGGAGACGTTGACATCAAGCAAGAGCCCGGTGAAGACGACAAGGATTCCAAGGACACGAAGCGCGAAACCAGCAACAAGGAGAACAAGCTGGAGCCTGAGGCGGAGGCAAAAGACGATCTCAAAGAGCTGATTGGCAATGCACACTCGAAGCTGAGATCGCCCATGAAGGAGGAGTCCGGCGAAGTTGGCAGTAAAGAGCTGCGCCGGCTGCAGTTCTTCGGCGCTGGGCCCAAGATGGCGGGCTTCAACGTCAAGCGGAAGGCGGATGACAAGACTAGGGGAAAGATTATAGACTATCAATTTGACTATGATCCACTCGCAAAGTACATTTGCCAGAATTGTAAGCGCGGTGACGCCGAGGAGCAGATGCTGCTGTGTGATGGCTGCGACGATAGCTATCACACGTTCTGCCTCATGCCGCCGCTGAGCGAGATTCCGAAGGGCGATTGGTGCTGTCCGCGGTGCATCGCTGCCGAGGTCAGCAAACCTACGGAGGCGTTCGGCTTCGAGCAGGCGCACCGCGAGTACAACCTGCAGCAGTTTGGCGAGATGGCTGATACATTTAAATCCGAGTATTTCAATATGCCGGTTCATCTTGTATCAACGTCAATGGTAGAGAAGGAGTTCTGGCGCATCGTCTCCTCCATCGATGAAGATGTTACAGTGGAGTATGGCGCTGATTTGCACACCATGGATCACGGTTCGGGCTTCCCGACGAAGAACTCCATCAATCTGCAACCGGGCGATCAGGAATACGCTTGTTCCGGCTGGAACTTGAACAATCTACCTGTTCTGGAAGGTTCGGTGCTCGGGTACATTAACGCTGACATCTCTGGAATGAAGGTTCCATGGATGTACGTGGGAATGTGTTTCGCTACGTTCTGCTGGCACAACGAGGATCACTGGAGCTACTCGATAAATTACCTGCATTGGGGCGAGCCGAAGACCTGGTACGGCGTCTCGGGGATGCAAGCCGAGCTGTTTGAGAAGACGATGAAGTCCGCGGCGCCGGAGCTGTTCCACACCCAGCCGGATTTGTTGCACCAGCTCGTGACGATCATGAATCCGAACATTTTGATGAACGCTGGCGTGAAGGTGTTTCGTACCGATCAGCACGCGGGTGAATTTGTCATCACGTTCCCGCGCGCGTACCACGCCGGTTTTAATCAAGGGTATAACTTCGCGGAGGCGGTGAACTTTGCGCCGGCGGATTGGATAGCCATGGGCCGCGAGTGCGTGCTGCATTACTCACAGCTGCGGAGATTCTGCGTGTTCTCACATGACGAGTTGATTTGCAAGATGGCGACTAACTCGGATAAGCTGGACATCACCGTCGCTGCTGCCACCTATACGGATATGCTGCGCATGGTGGAGACTGAAAAGAAGCTGCGCAAGAGTCTCTTGGACTGGGGTGTGACAAATGCGGAGCGCGAGGCGTTTGAACTGCTGCCAGACGACGAGCGCCAGTGCGAGGTGTGCAAGACGACGTGCTTCATGTCTGCTCTGACGTGCGAATGCACCAAGGACATGCTCGTCTGCCTGCGGCACTACACCTCGCTGTGCAAGTGCGCACCAAATAAGCACACGCTGCGCTACAGGTACACTTTGGATGAACTGCTGCCATTGCTCCGCAGCCTGAAGCAAAAGGCCGAGTCCTTCGACCGGTGGGCGGATTGCGTGAAGAAAGTGCTCGATCGCAAGCACCCGAAGAGCGTCACCTTGACGGAGCTGCGCACCCTAGCGACCGAAGCCGAAGGCAAAAGCTTTCCCAAGTCTGACCTGATGCAAACGCTCGCGAACGCGATCGAGGACGCTGAGAAATGCGCCAGTGTCATACGGCAGCTGGACTTGAAGAAGGTGCGCACGCGCCACTCCTATGATCAGAAGAACAAGCTCACTTTAGAGGAGCTGCGCCTCTTCTACGAGGAGATTGACAGTCTCGCCTGCATCCTGGATGAGGAGAAGATCATCAAGGACTTGTTGGATCGCACAAATCACTTTGAGAAGGAGGCGGAGCGTCTGCTGCAACTGGCGCTCTCCGATTGCAAGCTGAGCGAGGTGGACGACACGATCAACTCGAGCAATGAGCTGtgtattgagttgcctacacTCAAGGCGCTTACCGACCGCCATAGTCAATTAAAATGGGTGAAAGAGGTGTTCGACGCGCGGAAGAAGCCCGGGGACATTGCAGATATCGAAACTTTACAGGACCTACTTCGAAAAGGAGTCGTGCTACCCAACGACTCCTTGATTGAGAGTATGCTGGGTGATATCCAGGGGGTCATCACGCAGGCAGAAGACTGGGAGGCAAAGGCGCAAGCACTCTTTAAGAAAATCGGCGCGGATGTCGTCGAGGACGCGGAAAATCTAATCAAAGCCGCTGCCAAGATCAATGTCTACTTGCCAACGGAAAACCAGCTGGTGGACAGCGTCAACAACGTCAAAGACTGGTACAAACTCCTGCAGGAGATGAACTCCTTGGAGTTCTATCCGTATTTATCTTCCATTGAGGACTTAATTAAGAAGAGCCGGAACTTCCCCTTCCAGCTAGAAGAGGTCGATCGCCTTAAAGGTTATGTGAAGGGCGCGAACGAGTGGAAGGAGAAGACTTCCAAGACGTTCCTGCGGAAGCTGGCGACGATCTCCCTCATGGATGCGTTGTCGCCAAGGTCACAGATTGCTCCAGCCAAGGGGAGAAAGCGAAACACTGAAGACGTCTTCAAGATCACCGAGAATATGGACCAGGCTTCCTTGGTCGCTGCGTTTAAAGACGCTGAGGACCGCGAGATGAAGTTCATCGAGACCACAAGGAGCGCGAATCAAACCAAGGAGTTGAAGAAGGACTCCGACGCGGCGTTCTGCCTGTGTTTAAAAGGCGCCGCTGGCTTGATGATGCAGTGCGAGCTGTGCAATGATTGGTTCCACTCGACCTGCGTGCAGCTGCCCAAGGTCACTGGGCGGAGGCTCCGCAAGAATTTGAAAGCCTCCGGGATTCACATGGGCTTCAAGGAGTGCAAGTTCCTGTGTACGAATTGCAATCGgacgcggcggccgcgcctCGAGACGATTCTGGGGCTGCTGATGGCGCTGCAGAAGCTGCTGACGCGGATACCCGAAGGCGACGCGCTGCAGTGCCTCACGGAGCGCGCGATGAACTGGCAGGACCGCGCGCGGCAGATGTTAAACCACCCGGATGtcgctgcggccgcggcgaagaTACAAACCATGACGCAGAAGTACAACGACTCGAAGGTGAAGCCGGATAAAAATGGCGATGTCAAAAAGCTGGGCGTCGGCACGGATAAGGAGGTCTCGCTGGTCTCGCTGAGTAGTGAGGACGAATCGCAATCGGCGATGAGTAGTATGTCCTCGGACGATGAAGACTGTAAAGATGAGCACGCTTATTCGATGCACGCCAAGGGCGAAAATGACTTTTCAGTTACTTTGAAGGAGGAGACGAAAGAGATGTTGTCTGAACTGCTAGTGGAGGGGGACATGCTCGAGGTGTCATTGGAGGAGAACGCGCAGCTGTTCCAGGTGGCGTTCATGTCGCGCGACTACACGAAGCACCCGAACATCATCGACTTCGACACGGCAGTGAAGCAGCAACCGCGCAAAGGCCGGAAGCGGCGCTCCGAGGTCGAGGAGACGCCGGAAAAGAAGAAGCCCACGATTGCGACGGTGAAGAAACCGAAGATGAAGCGCCAGCAGAATCAGAAGGAGGTCGGCGGCACGCCGAAGGTGACGCGCAAGCGCaagggccgcgcgcgcaactcgCAGTCCAGCTCCGACTCGGAGGAGGCCGACGAGGATGCAATGTGCGCGGTGGCCAAGTGCCTCAAGCCCGTCGGCGACGAGGTCGACTGGGTGCAGTGCGACGGCGGCTGCGAGCAGTGGTTTCACATGGCGTGCGTGGGCCTCTCGGCGAAAGACATTAACGAGGACGAGGACTACTATTGCTCGGCGTGCTCGCCGCCCGACACGGTGAAAGAACAATTGAAGCTCGCCAATGCGAAGGAGCTAGTTATAGAGTACTAA
Protein Sequence
GSSLKIPMVEKRALDLYTLHRLVENEGGFVPVTNGRKWAKIAVHMGYPHGKGTGTILKTHYERLLYPYEVFTNEKKKPGETLEDLLEAKDDDYKPPVNCNSATGSPKKNGVMRRSLKSASAEKSKDRKCKSNGDVDIKQEPGEDDKDSKDTKRETSNKENKLEPEAEAKDDLKELIGNAHSKLRSPMKEESGEVGSKELRRLQFFGAGPKMAGFNVKRKADDKTRGKIIDYQFDYDPLAKYICQNCKRGDAEEQMLLCDGCDDSYHTFCLMPPLSEIPKGDWCCPRCIAAEVSKPTEAFGFEQAHREYNLQQFGEMADTFKSEYFNMPVHLVSTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSINLQPGDQEYACSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFHTQPDLLHQLVTIMNPNILMNAGVKVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVLHYSQLRRFCVFSHDELICKMATNSDKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEVCKTTCFMSALTCECTKDMLVCLRHYTSLCKCAPNKHTLRYRYTLDELLPLLRSLKQKAESFDRWADCVKKVLDRKHPKSVTLTELRTLATEAEGKSFPKSDLMQTLANAIEDAEKCASVIRQLDLKKVRTRHSYDQKNKLTLEELRLFYEEIDSLACILDEEKIIKDLLDRTNHFEKEAERLLQLALSDCKLSEVDDTINSSNELCIELPTLKALTDRHSQLKWVKEVFDARKKPGDIADIETLQDLLRKGVVLPNDSLIESMLGDIQGVITQAEDWEAKAQALFKKIGADVVEDAENLIKAAAKINVYLPTENQLVDSVNNVKDWYKLLQEMNSLEFYPYLSSIEDLIKKSRNFPFQLEEVDRLKGYVKGANEWKEKTSKTFLRKLATISLMDALSPRSQIAPAKGRKRNTEDVFKITENMDQASLVAAFKDAEDREMKFIETTRSANQTKELKKDSDAAFCLCLKGAAGLMMQCELCNDWFHSTCVQLPKVTGRRLRKNLKASGIHMGFKECKFLCTNCNRTRRPRLETILGLLMALQKLLTRIPEGDALQCLTERAMNWQDRARQMLNHPDVAAAAAKIQTMTQKYNDSKVKPDKNGDVKKLGVGTDKEVSLVSLSSEDESQSAMSSMSSDDEDCKDEHAYSMHAKGENDFSVTLKEETKEMLSELLVEGDMLEVSLEENAQLFQVAFMSRDYTKHPNIIDFDTAVKQQPRKGRKRRSEVEETPEKKKPTIATVKKPKMKRQQNQKEVGGTPKVTRKRKGRARNSQSSSDSEEADEDAMCAVAKCLKPVGDEVDWVQCDGGCEQWFHMACVGLSAKDINEDEDYYCSACSPPDTVKEQLKLANAKELVIEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-