Basic Information

Insect: Dyspetes luteomarginatus
Gene Symbol: Prdm15
Assembly: GCA_963669185.1
Location: OY769903.1:2043813-2048106[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.7e+02 3.1 0.0 2 23 254 275 253 275 0.94

2 14 0.0021 0.17 12.5 4.1 3 23 284 305 283 305 0.97

3 14 1.2e-05 0.00095 19.6 0.6 2 23 482 503 481 503 0.97

4 14 0.022 1.8 9.2 0.5 1 20 507 526 507 527 0.95

5 14 3.3e-05 0.0027 18.2 2.5 1 23 537 559 537 559 0.98

6 14 0.96 78 4.1 1.8 3 20 565 582 564 584 0.93

7 14 6.4e-05 0.0052 17.3 5.9 1 23 588 610 588 610 0.96

8 14 0.00022 0.018 15.6 0.3 3 23 634 654 632 654 0.97

9 14 0.33 27 5.6 2.9 1 23 659 681 659 681 0.97

10 14 0.00058 0.048 14.2 0.1 2 23 687 708 686 708 0.95

11 14 0.01 0.82 10.4 8.7 1 23 713 736 713 736 0.96

12 14 0.013 1 10.0 2.3 1 23 742 764 742 764 0.95

13 14 0.0015 0.12 12.9 6.9 1 23 770 793 770 793 0.96

14 14 0.048 3.9 8.2 4.7 1 23 798 821 798 821 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.7e+02	3.1	0.0	2	23	254	275	253	275	0.94
2	14	0.0021	0.17	12.5	4.1	3	23	284	305	283	305	0.97
3	14	1.2e-05	0.00095	19.6	0.6	2	23	482	503	481	503	0.97
4	14	0.022	1.8	9.2	0.5	1	20	507	526	507	527	0.95
5	14	3.3e-05	0.0027	18.2	2.5	1	23	537	559	537	559	0.98
6	14	0.96	78	4.1	1.8	3	20	565	582	564	584	0.93
7	14	6.4e-05	0.0052	17.3	5.9	1	23	588	610	588	610	0.96
8	14	0.00022	0.018	15.6	0.3	3	23	634	654	632	654	0.97
9	14	0.33	27	5.6	2.9	1	23	659	681	659	681	0.97
10	14	0.00058	0.048	14.2	0.1	2	23	687	708	686	708	0.95
11	14	0.01	0.82	10.4	8.7	1	23	713	736	713	736	0.96
12	14	0.013	1	10.0	2.3	1	23	742	764	742	764	0.95
13	14	0.0015	0.12	12.9	6.9	1	23	770	793	770	793	0.96
14	14	0.048	3.9	8.2	4.7	1	23	798	821	798	821	0.95

Sequence Information

Coding Sequence: ATGCTACTTTTGAAAAGAATCACGATAAACGAGAATGCCAAAATGCCGAAATACGATGAgactgaaaataatgaaaaaatcaagatcGAGTCTGCTTACTTGTCAGCATGTAGCATTTGTGGCCAGAAACATGAAACTCTAACGTGCCAATTTTTTCTGGACTTAAAATATgTAAAGGATGAAGCTCTAGTGTCGAGAGCAAGGCAAACTTTGCCAACAAATttggaaataagaaaaatggcCGATGGCTCTACGACTGTAATATCAAAATGTGATTTTCATCAAGGAACAACTTTTGGTCCTTTGCAAGGAAAACGCGACTGGACAATGAATCCAATGAatgattttccaataaaaatatttggcaaTGATGAAACGGAAACTTATCATTTGGATCGTTCGAGCGAGGATTCATCAAATTGGATGTGCTTTGTTTGTCCAGCCTCGAGCTCGTCCGAACAAAATCTCATTTGTTATCAAATGGAACGTGAAATTTATTACACCGCTATGCGTTTTATTCGAATGGGAGAAGAATTGCGTGTATGGTATTCACCTTATTACGCCCACAGAATGAAAATGCCAATTTATAATATGGAATTTATGGGATCAAAtgttgatgataattttacaacagagaaaattgtgaaactcgaaaataatgataaaaatgaatctcAAGTATCGCataaaaatattcaagaaattGCTCAACGCTTGCCAGCCGAACATTTGGGTGCTCGTGGTGACAAAACAAGCTGGAATTGTCGAATATGCTCAATCGTTATTTCATCGGTGATTGAATATGCGAAACATTTGATGGAACATTACAAACCACTTTCTGGGGTCTTTTGTGAtgtttgcaacaaaaaatttcacagacTTTCCGTACTACAAAAACACAAACGTATCAAACATCCTGAGGTGGCGTCAAGCAACGAAGTTGTTGGTATTCCAACTTCGGAAAATCAACAGCAACAAAATgcacaaACGATACTGAATATGAGCGATTCCGAGGGCCAAACTTCCCAAGCCATGAAAGacatattggaaaaatttaaaactggAAAAACAATAACTGAGAGTTGTTtattgtcgtcgtcgtcgtcatcgtcgtcgtcctcgtcatcgtcctcgtcggaaattgaaatggaaaagaataatgataatgaattgCCAATTATCGATACTCATTCGATAAATGTTGCTGatcttttacaaaataatgGCGCTCTGatggaaaattcatcattgaaATCGATCCTTGAAAATCAATGCTTGAATATAAATCTCGGACTTGGCAGTATGACGGATTCTATACTTtccgaaaatataataaatggcGTTGATTCTGTTAAATTTAACGTTGAAGAATTGACCTCGGAACTTTTGGACATGACAACACAGCACgatgttgaaaatattaatcgtcGTATTGAAAATCTCGAGTGtgatatttgtgaaaaaaaatttgaaaaagctGATTATCTCTATCGTCATTTGAGAAAACACACCGGAGAATTTATCTGCACGAATTGCTTGGGTGTTTTtgcgagaaaagaaaatttgttgacGCACTTGTGCCCCTCGAAAAAGCTCGAACATGAAAAATACGAGTGTCTTTATTGTCAGAAGccttttatattgaaaaaatatctcaaacgCCATATGACGAAGCATACAGAATGGAATAATTGCAAATGGTGTAGAAATTTATTCACATCGAGAACAGAGCTCGAGGCCCACAAGTGCCAAGCCCCAAAGCACGTTTGCTCACAATGTGGCAAAAGATTTGTTCATCGTGAGCATCTCAATCGTCATGGAAAATTGCACGTTGATCAAAAACAATCGGCCATTGtgaaaaaaccgaaaaaacgGCCATTAACGGAAAAACCAGTAATATGCGAAAAATGTggtgatttatttaaaaatccttACAGTTTGAAGCAACATTTGCGATCTCATGgagaaagaaaattcgagTGTGACGTTTGTCACAGTAAATTTCATAGAATCGGCGTGCTACAACAGCACAAATCAATACACCAAAGTGTACAAATACCGTGTcaaatttgtggaaaaaaactCAAGAGCAAAAAAGCATTGAGCGTTCACGTACTTTTGCACGGtaatagaaaatttcattgcgaAAAATGTGATAAGaGCTTCTTCCAAAGGTGCAATTATTTAAAGCATTACAAACAACTTCAcagcgataaaatatttcacaaatgtCCTCATTGCCCATCTCAATTTACTAGCGAATTGAGTTTCAATAAACACGTCGCGGCTCACGTAAAACCGAGCGAGCATCCTTGCACCTCTTGCCACAAAGTTTTTCATCGGgaATATCAGCTAAAACGTCACGTTCAATCAAATCATAGCGGTATCATATTTCGTTGTCCTTATTGTAAAATGACAGCGCGTTATCGTCACAGCATGAGAAGACATTTTGAACGACAGCACAAAAGTCTCAGCGATGAATGGGACAAACCGGGTTTTGTCAATgatctgattgaaaaaatttcaacatcgtTGATGATCGACCAAGTTGTAGTAAAAAATCAAAGGAATGAAATTTCCCGCATACCTTACGAGAATACAAATATGGTGGAACAATttcaagaagaaaataatgctcaagatttaattttatcggtAACTGGATTGaacgataataatgaatttgttGATCAGCCAATTGAAGAAAATCTCCCTCATGTCGAAGCAAATTCATTAAACGgtCAAGAAATTCTTCTTCAAGTATCGCAAATGGATGAGGTAGAATCAACAATTGAGAATAACGAATTAACGACCAACGAAGTTCCACAATTGAGCATCAGCGAGGCAGATGCTAATCTTGCAGAATCCGTGCTGGGTAACGCGTATATATTTGGCGAGGATGGTGGCGATATTATGTTTTACGTGCTCGACAATACGCGAGTCATTACCGAatattga
Protein Sequence: MLLLKRITINENAKMPKYDETENNEKIKIESAYLSACSICGQKHETLTCQFFLDLKYVKDEALVSRARQTLPTNLEIRKMADGSTTVISKCDFHQGTTFGPLQGKRDWTMNPMNDFPIKIFGNDETETYHLDRSSEDSSNWMCFVCPASSSSEQNLICYQMEREIYYTAMRFIRMGEELRVWYSPYYAHRMKMPIYNMEFMGSNVDDNFTTEKIVKLENNDKNESQVSHKNIQEIAQRLPAEHLGARGDKTSWNCRICSIVISSVIEYAKHLMEHYKPLSGVFCDVCNKKFHRLSVLQKHKRIKHPEVASSNEVVGIPTSENQQQQNAQTILNMSDSEGQTSQAMKDILEKFKTGKTITESCLLSSSSSSSSSSSSSSSEIEMEKNNDNELPIIDTHSINVADLLQNNGALMENSSLKSILENQCLNINLGLGSMTDSILSENIINGVDSVKFNVEELTSELLDMTTQHDVENINRRIENLECDICEKKFEKADYLYRHLRKHTGEFICTNCLGVFARKENLLTHLCPSKKLEHEKYECLYCQKPFILKKYLKRHMTKHTEWNNCKWCRNLFTSRTELEAHKCQAPKHVCSQCGKRFVHREHLNRHGKLHVDQKQSAIVKKPKKRPLTEKPVICEKCGDLFKNPYSLKQHLRSHGERKFECDVCHSKFHRIGVLQQHKSIHQSVQIPCQICGKKLKSKKALSVHVLLHGNRKFHCEKCDKSFFQRCNYLKHYKQLHSDKIFHKCPHCPSQFTSELSFNKHVAAHVKPSEHPCTSCHKVFHREYQLKRHVQSNHSGIIFRCPYCKMTARYRHSMRRHFERQHKSLSDEWDKPGFVNDLIEKISTSLMIDQVVVKNQRNEISRIPYENTNMVEQFQEENNAQDLILSVTGLNDNNEFVDQPIEENLPHVEANSLNGQEILLQVSQMDEVESTIENNELTTNEVPQLSISEADANLAESVLGNAYIFGEDGGDIMFYVLDNTRVITEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -