Basic Information

Insect: Dyspetes luteomarginatus
Gene Symbol: gtf3a
Assembly: GCA_963669185.1
Location: OY769907.1:23554544-23559643[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0016 0.13 12.8 0.1 2 23 844 865 843 865 0.97

2 16 1.3 1.1e+02 3.7 1.3 2 23 898 919 897 919 0.96

3 16 0.00065 0.053 14.1 1.9 2 23 927 949 926 949 0.96

4 16 0.0078 0.63 10.7 3.6 1 23 956 979 956 979 0.96

5 16 0.00088 0.072 13.7 2.9 1 23 985 1008 985 1009 0.94

6 16 0.49 40 5.0 0.2 2 23 1016 1036 1016 1036 0.94

7 16 1.6e-07 1.3e-05 25.5 2.0 2 23 1042 1063 1041 1063 0.97

8 16 2.4e-06 0.0002 21.7 0.2 1 23 1069 1091 1069 1091 0.99

9 16 0.0047 0.39 11.4 2.8 2 23 1103 1125 1102 1125 0.95

10 16 0.5 41 5.0 2.6 1 23 1131 1154 1131 1154 0.92

11 16 0.0047 0.38 11.4 1.9 2 23 1176 1198 1175 1198 0.95

12 16 0.0033 0.27 11.9 1.9 2 23 1205 1227 1204 1227 0.96

13 16 4.4e-05 0.0036 17.8 1.7 2 23 1235 1256 1234 1256 0.97

14 16 0.0013 0.11 13.1 2.3 1 23 1262 1285 1262 1285 0.96

15 16 0.36 29 5.5 3.2 2 23 1292 1313 1291 1313 0.96

16 16 0.55 45 4.9 1.9 1 23 1319 1341 1319 1341 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0016	0.13	12.8	0.1	2	23	844	865	843	865	0.97
2	16	1.3	1.1e+02	3.7	1.3	2	23	898	919	897	919	0.96
3	16	0.00065	0.053	14.1	1.9	2	23	927	949	926	949	0.96
4	16	0.0078	0.63	10.7	3.6	1	23	956	979	956	979	0.96
5	16	0.00088	0.072	13.7	2.9	1	23	985	1008	985	1009	0.94
6	16	0.49	40	5.0	0.2	2	23	1016	1036	1016	1036	0.94
7	16	1.6e-07	1.3e-05	25.5	2.0	2	23	1042	1063	1041	1063	0.97
8	16	2.4e-06	0.0002	21.7	0.2	1	23	1069	1091	1069	1091	0.99
9	16	0.0047	0.39	11.4	2.8	2	23	1103	1125	1102	1125	0.95
10	16	0.5	41	5.0	2.6	1	23	1131	1154	1131	1154	0.92
11	16	0.0047	0.38	11.4	1.9	2	23	1176	1198	1175	1198	0.95
12	16	0.0033	0.27	11.9	1.9	2	23	1205	1227	1204	1227	0.96
13	16	4.4e-05	0.0036	17.8	1.7	2	23	1235	1256	1234	1256	0.97
14	16	0.0013	0.11	13.1	2.3	1	23	1262	1285	1262	1285	0.96
15	16	0.36	29	5.5	3.2	2	23	1292	1313	1291	1313	0.96
16	16	0.55	45	4.9	1.9	1	23	1319	1341	1319	1341	0.95

Sequence Information

Coding Sequence: ATGACCGAATCGGAACAAATATTGTACTTTAGCGtaggaaaaaatgataataatgtcGAAGCTGATCATTTGAATGATGATAATTCAACGCACGAAGATCTTATACGAGATTTGACTTCGGAGAATATCgtcgatcttgatgatgttCTTTGCCAGAATGAGCAGCCACCGGAAACTACAGTGGCGGCACGTAATCCCGGAGGAAATGTTACTTCATTTCCAAGCTCGGGTGTACAGGAGTACACCCTCATCGAGATGACTCCggGTTATCACAAAACAGATGGAAAAATTAGCACGAGGTCGCTGATAAAAGCCGATAGGCAAGATCACGATTATAGCGAAATTCAACGAATGGCGAATCTTGGAAAAATGAACGATCGTAATAACGTGCGAAATAATGCAGAATCTTTGCTGagaggaacgagagagacatCGATTCCCATATCGAGCAAAGAAAGATCGATAGCTCGTGTAAAAAACATAAACGAATTGAAGAAAGTAACACCGAGAGTAAAGCTTTTgtcaccggaagtgacgaatTTAACGCAATTgacaaaaatgcatttttcgaGCCACGCAAATTCACTGGCACATGAACAATTGAACAAATATTGTCGAACTTGCGCCGGACTAAAAATACCCCTCGTTGATATTTACAGCGAGAAAGGAATGCAAATGCGTTTGAATCAGCAGATGAAACATCTCGAGGAGATAAACGAGCACGACAGTCTCTCGACTCAGATGTGCATGGATTGCAtatgtgatttaaaaatgagttacaaatttttcatgcaaataaaaaaagcgcAAGTTAAATTACAATCGATATACGCATCATTGAATGGAAATTCAACAAGCAACAATAATCCTCGTTTGACTTCCGACGATGAGAAATCACGTCCAATAGCGACAATTGCACTGACCAAAAGTCCCGATCGAGTAACATATCAAGGTAGAAAATCGGAAAGCGACAAATCCGAAATatccttaaaattttcaagtccTAAGAAAATTTCCGAAGAATTTccgataaaaatgatagatgAGAAAGCGTCAGAGGTCAAAATTGAGTATGAACATAATGACgattgtatgaattttaatcagAGCGATGACAATGAATCGATAGAAGAATTTGATCCCGATGATCCTTCGTCATTTCAATCGGACATTGCTGAATCGAACGATGATTGTCCGAAGGAAAGGCTTGAgagtacgaaaaattttgaaactcTCGAAATGCCAACTTTACAATGTGACCTTGATGATTCGGAAATCATTGAGGAAAATATAACGATCGccgatgaaaaaatgagaaaatcagAGCCACGCGTAGATAATGTTAGCAAAACGGATCCTAGTAAAACGGTTTATCAGTACGACACACGGCTAAAAGCGTATATAAAAGTTGAGCCACCGGACGACGATGGTACAATCGATCTTAAATTACATGGCGGAGGAAAATTTGAGAGTGATCAAGAGAGCACGAAAAAGGATGGAAGAAAGCCCGAAAAACAGCCAAATATATTAAAGCGCAAATCAGGacgtaagaattttttaggGAATCCCGTGACGTGTGTCAAAGGATCGGATTCGATGCACGTCAGATCGGGACAAAGAGatatgaaaaagccaaaattgaATGTACAAAACGCTCTGAACATCACAAATGAGAATGAGGATGGTATAATGTATGTAACGGTAAAAGGTACAAAACCAAACGAGTTATTGCTCGTCAAGGtgaaaaagatggaaaaaccagcagaaaaaaaagaagagaaaaaaaaggatgagaagaaaaagctCGAAGTTGCGCCTGtagaaaaaatagttaaaaaatttgagcccccaagcagcagcagcagcagcagcaaggATAAAGATTTAATTCTCGATCGTTCCAAGGCCCTCGACAAGAGGGAACAAATAATTGAGGAACAAATTGAGGAATACAAGAAAAAGCGGGAAAAAATTTTAGGCGGAAGTACAGGACTTCCAAATGCATTAAAATTCGAGGATGGCCTTATTCGTTTTGTAAATCCAATAGAAAATCCAGCGAGTTCGATCGAAGAGAACAGcataagaattaaaattgagcCGAGCGAGGAAATTGGTGAGATAAGGGCGGTGATAACAACGCCGCAGGGGGAAATTCAACAAGATCCAAAACCACCAATTAAAATTGAGGACAGTTATGACAATGCGGGTGAATATCTCTCGCGTCTGGCTCGACTGAAGAGAAAATgggaaaatgcaaaaaaaaagaaagaatcaTTACAGCGGGAGCTCGATAAATCTTACACGGAGGGAAATATGGAAAAGCTCGCTCGTATATtaggcgagagagaaaaaaatcttgctgattttcaagaatatttaaaacaacGAAGAATCGTCATAACTCGTCTCAAAGACGAGGATGTTATTTCCCTCTATGAGGATCGTAATAATACGCaaacaaaatcaaattttcctgATCTCATTGATGCGAGTACGCCGAATGATTACATACCCCAGGAGGATTATCTAGAGTGCGATTATTGCTCCGAGACTTTTGCTCTTCGCGATGTTCTCGAGGAGCATCTCAAAACTCACGATTACAAGCTCATGTATTGGTGCGAGGATTGTCGTCTCGAATTTCCGACAATAAAGACAAAACGTATGCACAACAGcggatgtttaaaaaaattaacttgtcGTTATTGCGATTTGATGCTCGAGTCAAAAGGTAAAAAGAGGCAACACGAGCAAAAACACGTTGACGCTATGTACGGCCAAATGTGCGATGTTTGCggtgaaaaattcaagcatCAGGCAACTCTGGATCAGCATTTTAAGACTCAACATATGATCTGggagaaaattcatcaatgtCCAAAATGtccgaaaaaatttgcatttaagcaaaaattaacatttcatTTGAAATCCGTTCATACGACACTTCGGGCATATTTGTGCGAGGATTGTGGCTCAGATTTTAAGAATCCAGCGAGCCTGCGACATCATCGTTTGAGAAAACATCATCCAACTGGTAATAAACGGGAATGTCCAGTTTGTAATAAATTGGTGCCTTTTTACAGTCTCTCAAAGCACATGTACACCCACAAAGCATACTCGATACAATGTCCTCATTGTgacaaaatgtttaaaaatagcTCAACGCTGAGGCAACACGTGAGAATACACGAGGATCAGAGACAATACAGATGCGACACATGCGGCGTTGGTTTTAATCGTCGGGATGGCCTCCGTTTGCACATGAGGGTCCACCAAAAAACTGATAGCCGAGCATTGAAAGAATGCTCGTGCCAGATATGCtcggaaaaatttccaaatcaCTCGATGCTCGTTATACACAGAAATCGGGTTCACAAAGATGGACGACAGTACACTTGTCATATATGCAACAGATCGATGCTCTCGACGAGATCCCTCGAGTGGCACATGTCGCACATACACAATCAAATATTGCCCGGTGGAACAAAGGAAGATCCGGAAATTCCACCGGAGAAAAAGCGCGTCTCTTGCGCACATTGTGACAAAACATTTAAAACTGAAATGATACTGAGGACTCATATTAAAAATACGCATGTTGAAAAAGATCCGACAAAGTGTTTGGACTGCGAGCAAACTTTTACCTCCGATGTACGCTTGAGGCATCATATGATGGTCACACATAACAGACTTGAGGGAACTCTTACTTGTCCCCATTGTCCAAAACGTTTTGTCAATCAGTTGAGACTCAAAACTCACATGATTTCTCATTCAGAGGACAGGCCTTATACTTGTGAGATTTGTGGATTTAATCTGAAGACTAAAATACAATTGATCAAGCATCATCAGAATCGTCACAGCGACGAGAGACCGTTGCAATGTCGTTATTGTCCCTGGCGGTGTAAACAAGTTAGTGCCCTCGTTTGCCACGAGAGGACCCACACAAATGAGCGTCCATATTCTTGCATTGTTTGTCGGCaaagatttaaatatttgggggataaaaataaacacgagAGAAGACACGAGAGTCTCGGAGGCTCGGGATTTAAGAGAATTGTCGCTGGGAGAAATCTTAAACAGCCGAAAATACAAACCGAGGAGACTTCGACCTCTGAACAAGAACAAATTGATTATGATAATCAGGACGAGGAGGGACAGCTCACCGAGGAACAGGAACTGTACGAGGAGGGACAGGATGACGAAGATTATGTCGAGGATAATGCCAATGAGGAGGAAGACGACGAGGATGAAACTGAAGTGAAATTCGAGACTGAAGAAATTTGCCAAGAGTACGAGCAAACTTACGAACagGAATACGAAGAAACATCGAGAGAAGCGTCCGAAGCTGCTGAAGTTATAATGAACATGGAGGACACGACGGTGTACACGGAAGAAGTTACAGCGGAGAATATCGAAACAGCCGAAATAATAACCGACGATTTAATGACCAATCAAATATTACAATCTCAACAGTCGGACATTACCGTCGTTCATCTTCAGCAACACGACGACGATGGTAAAATTCAAGTTATACCGGTAATGCTGTCTTTGCCCGATCTCAGTGACTCGAGTGCCGAAGTAAATCTTGCGACGGCGTCGATAATGTACAATAATTGA
Protein Sequence: MTESEQILYFSVGKNDNNVEADHLNDDNSTHEDLIRDLTSENIVDLDDVLCQNEQPPETTVAARNPGGNVTSFPSSGVQEYTLIEMTPGYHKTDGKISTRSLIKADRQDHDYSEIQRMANLGKMNDRNNVRNNAESLLRGTRETSIPISSKERSIARVKNINELKKVTPRVKLLSPEVTNLTQLTKMHFSSHANSLAHEQLNKYCRTCAGLKIPLVDIYSEKGMQMRLNQQMKHLEEINEHDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSIYASLNGNSTSNNNPRLTSDDEKSRPIATIALTKSPDRVTYQGRKSESDKSEISLKFSSPKKISEEFPIKMIDEKASEVKIEYEHNDDCMNFNQSDDNESIEEFDPDDPSSFQSDIAESNDDCPKERLESTKNFETLEMPTLQCDLDDSEIIEENITIADEKMRKSEPRVDNVSKTDPSKTVYQYDTRLKAYIKVEPPDDDGTIDLKLHGGGKFESDQESTKKDGRKPEKQPNILKRKSGRKNFLGNPVTCVKGSDSMHVRSGQRDMKKPKLNVQNALNITNENEDGIMYVTVKGTKPNELLLVKVKKMEKPAEKKEEKKKDEKKKLEVAPVEKIVKKFEPPSSSSSSSKDKDLILDRSKALDKREQIIEEQIEEYKKKREKILGGSTGLPNALKFEDGLIRFVNPIENPASSIEENSIRIKIEPSEEIGEIRAVITTPQGEIQQDPKPPIKIEDSYDNAGEYLSRLARLKRKWENAKKKKESLQRELDKSYTEGNMEKLARILGEREKNLADFQEYLKQRRIVITRLKDEDVISLYEDRNNTQTKSNFPDLIDASTPNDYIPQEDYLECDYCSETFALRDVLEEHLKTHDYKLMYWCEDCRLEFPTIKTKRMHNSGCLKKLTCRYCDLMLESKGKKRQHEQKHVDAMYGQMCDVCGEKFKHQATLDQHFKTQHMIWEKIHQCPKCPKKFAFKQKLTFHLKSVHTTLRAYLCEDCGSDFKNPASLRHHRLRKHHPTGNKRECPVCNKLVPFYSLSKHMYTHKAYSIQCPHCDKMFKNSSTLRQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKTDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNQILPGGTKEDPEIPPEKKRVSCAHCDKTFKTEMILRTHIKNTHVEKDPTKCLDCEQTFTSDVRLRHHMMVTHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNLKQPKIQTEETSTSEQEQIDYDNQDEEGQLTEEQELYEEGQDDEDYVEDNANEEEDDEDETEVKFETEEICQEYEQTYEQEYEETSREASEAAEVIMNMEDTTVYTEEVTAENIETAEIITDDLMTNQILQSQQSDITVVHLQQHDDDGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -