Dlut007903.2
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- L_1
- Assembly
- GCA_963669185.1
- Location
- OY769906.1:16650453-16670501[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 9.2e-06 0.00075 19.9 1.5 1 23 97 119 97 119 0.98 2 20 0.52 43 4.9 3.9 1 23 125 147 125 147 0.97 3 20 1.2e-06 9.8e-05 22.7 4.1 1 23 153 175 153 175 0.99 4 20 0.00025 0.02 15.4 0.2 1 23 181 203 181 203 0.99 5 20 0.00019 0.015 15.8 0.4 1 23 361 384 361 384 0.96 6 20 0.46 38 5.1 0.0 2 23 395 417 394 417 0.88 7 20 0.23 19 6.1 0.1 3 23 487 507 486 507 0.97 8 20 0.0016 0.13 12.8 0.0 3 23 523 543 522 543 0.95 9 20 0.00011 0.009 16.5 1.1 1 23 552 575 552 575 0.94 10 20 2.5 2.1e+02 2.8 0.1 1 23 580 603 580 603 0.91 11 20 0.76 62 4.4 2.2 2 23 676 697 676 697 0.96 12 20 0.007 0.57 10.8 0.0 1 23 702 725 702 725 0.95 13 20 2.2 1.8e+02 3.0 0.1 2 23 794 817 793 817 0.87 14 20 0.00019 0.015 15.8 1.3 2 23 833 855 832 855 0.96 15 20 1.2 96 3.8 0.6 1 12 864 875 864 887 0.76 16 20 7 5.7e+02 1.4 0.2 2 23 895 916 894 916 0.95 17 20 0.0019 0.16 12.6 0.1 2 23 1096 1118 1095 1118 0.96 18 20 0.047 3.8 8.2 0.5 1 23 1128 1151 1128 1151 0.96 19 20 0.017 1.4 9.6 0.1 2 23 1194 1216 1193 1216 0.94 20 20 0.32 26 5.6 1.3 1 23 1223 1246 1223 1246 0.92
Sequence Information
- Coding Sequence
- atgCTTTTCAAAGGCAATAGTTCGCGATTGGAATTGCTGATTGAAAAGATCCAGGCCCACAAGGAATCACCGTCGCCACCCCGGGTCGAAAAATGCAGTCCCCGATCAAAAGATGCTTTGGGCACCGGTAGTTCTTCTTGGCACAGCGAGGATGGAGGACCAAATTCACGACGGGGTGGAGAAACTCCATCGTCCTGCGCGACACCCACATCAGCCAGTTTTCCATCGGAACCGGAAGTCGACAATGAAATTGGTAGTAACGCCGATGGAAACAATCCAGCAGCCCCTTATCCATGCCAATTTTGTGACAGGACGTTTCCTCGACTTAGCTACTTGAAGAAACACGAACagAGTCATGGCGATCAAATGCCATATCGTTGCAGTTGGTGCGCAAGGCTTTTTAAACACAAGAGAAGCCGCGATCGTCATGTTAAGTTACACACCGGTGACAGAAGATATCGCTGTTCCCATTGCGAGGCTGCATTTTCAAGAAgTGATCATTTGAAGATCCACATGAAAACCCACGACAACCAAAAGCCTTATCAGTGCACGGCATGTTCGCGTGGCTATAATACCGCCGCAGCCTTAACATCGCACATGCAGTCTCACAAGAAGCATCAAAGTCCAAATCAGAATACAAAATTGGACATGGATTATGGTCGTCGAAGTGTGTCATCGCACAGCACGTCTTCTCCACCTATTCAAACTTCTCCATCTCCCAGCCTGAATCTGAGTCTAAgcgcaaaaaattcattgaaaccTCAACAAACGACCTACCACAACAGTAGCCATGGACCAAAGCCACCTGTCCGTAATTCGCCATTGAAGCTTGCCTGCATGTATTGCACCAAAGATTCATTCACGAGTATGCAACAATTGCAGATGCACGTTCATGCGATGCATCTGGCGATTCTCAACggtgaaaatttaacaattgaaTCATCTCGGCTGAATCAACCGGAGGCGAACAATTCAAAGACTCGTGATAAGGAGTGCTCGGAGAAAAACAGCAGCAATGATTACGATCGCACCTATCATGAAGGTCGTGAAAAATCCCCGGAAAGAGTAttggaaaatacattttcctGCGGTCAGTGTACAATGAAATTCTCCAATCTGAGTGAACTTCGCGATCATCTAGTAACGATACATCGAAACGACGGTTACGGCTCTACTCTGATGATGTGTCCATTGTGCGGAATTCCCTGCGCTTCAGCAGCCGCATACGCCGAGCACTATGTCCTCCAACATTGTGAAAATCGTCGTGTAACCCCGAAAGATTCGCACCATCGTGACTGGGACAGTGGAAGGATCAACGGTGGTCGCGAAGACAGTCGTCCGGGTTCGGAGGATCATGGGATGACAAGCAGATCTGACGTTGGATCGTCGGAACCAGCTGACTTGACAAAAAAACACTCCAGGCCCGGTGAAACTGGTTACACGACTGGCACTCTCCTTTGTGGTCAATGTGGCGCTGCTCTGAAGGACTTTGAATCATTTCGCGAACATCTGGCGAGGCATCTTCAAGCGGATCAGCAAAAGACCGAAGTAATACCGAGGAATCCATGTCCAAAGTGTGGCACCATTTTTCCAGATCGTGAGGACATGTTGGCTCATTTGACCGAGCACTATCTTGGCCAGGTGACGAAGGAATATACTTGTGGTGCttgtaaaaaatcgtattctcATCCGGACCTCTTGCAACGACATCTTCTCGACACCCACGCCCATCATCTTTATCGATGCGCTGTTTGTCGTGATACATTTGACTCAAGAGTCGCCATACAGGTTCATTTTGCTGTTAAGCACAGCCAGGAGTGTCAGATCTATCGTTGCAGTGCTTGCGTCAGTTTGAGCAACGAAAATTCACCGGGAAACTCGCCTGACAATGGAAGAAATTACTTTCGTAGCGAGGCAGAAATGGCAAATCACGTTAGAACAGTTCATGCACCAGTTACGATCGTCAATGAGAGTCCTTTGCGAAGAAGTCCCGTCTCCACACCAGTTGGCACTGTCACCACTCCTAGATGCGTTTTTTGTGGTATTTGCTGCAATACTGATTTGGAACTGCAGCTTCATCTGGCAAGTCACTCGACCAGCTTGTATCGATGTCCAATTTGCCGGGAGGGTTTTCCAGTTGAATTTTTGCTGGACAGGCATATTGCTCAAGCGCATCAACAAAATGGCGACAGGAGTGATGCGAGAGAAAATGGAAGGATATACAGAGCATCGAGACCCCAAGATGAAACGACAAGGCCACAGAAGCGTGGACGATCACCAGCCTTCAGCAATAACAATTCCCTTAATCAACGTGACAATAACAACAAGCGACCGAATTATAACACGACAAACGGTACACCtaacatcaccacatcacaaCAATGCGAGCTGTGCGAGCGTGCCGAATTTGCATCGGAAGCGGAACTTCAGGCGCACAAAAAATTGGTTCACACACCGGTAAAGCTTCAGGCCAAATCTTTGCCATTGCTAAGCATGACTTGCGCCTATTGCGGCGAAGTATGTCGCTCAAGAAAAGATCTCGAGTCACACACGAGAATTCAGCACGCCTCGAACGAGCATGGCGGACGTCACAAGTGTAATATTTGCGACGAGGTTTGTCCATCGGGTGGAATATTGGCCGAGCACAAGCTCCAAACTCATTGTAAGATTCAGTTGAGTGATACGTGCGTCGTTTGCCGTGGTTCTCTGGCGAATGAGGCCCAATTCATAGAGCACGTGCATCGTCACAGCCTGGAAGGAATTGAGCCTCAGCAACGATTGGACAACACACTTCCACTTCTTCCGGCGCCCTGTGTCGTCTGCAGACAAACGCTGATCAGCGATTTAGAGTGTCGTCTTCATGCAACTCATCATTTGAGGGGTTCGAGTGGTCCGCAAATCTCAAGTTCCAGTCCAAGTCCGAGTCAGACCAAGACACAACCGCCACAACAAACGTCATTGAGCTGTTGTCTCTGCCTCCGGGAATTCAGCGTCGATGACTTTGTCAGCTTGCCGTCAAATTCGATCGGAACTGGTGGTCCACCTTTGAGAGTTTGCAAACCATGTTACGTCAGGCACTCGCAAGGATTGCCGATACTCAGTTCACCATATGAACACGTGAGGCAAtcaaagagcgagagaatgactTGGTCCAATGGCAAAGATCCCAACAGTTGGGAGGGCTCGAGAGATCCCTGGGACAATGACAGATGCTACAAGAAAGACGAACCCGATAAAAATCAAGATGGCAGGCTTGAGGCTGGATTGAAGGACTTGGATGAGATTAGGTGCGATGAGTGCGGCAtcaagtttgaaaattcgGAGGAGGCTCAGATTCACAGGATGAAGGAACATGCGAAAAGTAGCGGCAGTTCAAATACTTATACCTGCATACAGTGCCAGATGTCTTTCCCGACTGAGGATAAGATTCGCCAACACGTGAGAAAAGTCCACCTGGAATCAACGAACAAAGCATCGATAGAGGCGCTACGCTGTCATTTGTGCATATTCGAGGCAAACAGCCCGCTACAACTCCAAGGGCACCTTATTGAGCATACATTTGCTGGCTGTGCGGGTCTCACTTGTTATATTTGTCAAGGATTGTTCACTACGCCCATTGCCCTTCagAATCATATGCTGCAACAGCATGGACTCGGTGCTCGTCCTTACGACTGCAGTTATTgcagtttaaaatttttctttcgcatCGAATTGGATCATCACGTTGTGATGGTGCATCGAAGAAATGAAACGTCATCGCCCCCTGTGGACGTGGGCGAAGAGATTGCGGCGGAAAATCGACCGTCGATAACGGAGAATCGAGACAAGAGCCAAGCAAGTGAGGAGATCCATGAGGGTCAGtctcgatcgaaaaatattacagtAAAGGAGGAAATTGTTAATAGTCCCGAAGGTAACGATGTTCATGTTGATATCGACGAGGCTGATGGAAATTACGAGATTGAACGGAAGCGGGAAGAAGACCATTTGGTAGCAGCGAAGAGGGAACCACTTGGGATTTCAcagggtgaagaaaaaaattcagtcttGATTACTACGAGGTAA
- Protein Sequence
- MLFKGNSSRLELLIEKIQAHKESPSPPRVEKCSPRSKDALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDNEIGSNADGNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKHQSPNQNTKLDMDYGRRSVSSHSTSSPPIQTSPSPSLNLSLSAKNSLKPQQTTYHNSSHGPKPPVRNSPLKLACMYCTKDSFTSMQQLQMHVHAMHLAILNGENLTIESSRLNQPEANNSKTRDKECSEKNSSNDYDRTYHEGREKSPERVLENTFSCGQCTMKFSNLSELRDHLVTIHRNDGYGSTLMMCPLCGIPCASAAAYAEHYVLQHCENRRVTPKDSHHRDWDSGRINGGREDSRPGSEDHGMTSRSDVGSSEPADLTKKHSRPGETGYTTGTLLCGQCGAALKDFESFREHLARHLQADQQKTEVIPRNPCPKCGTIFPDREDMLAHLTEHYLGQVTKEYTCGACKKSYSHPDLLQRHLLDTHAHHLYRCAVCRDTFDSRVAIQVHFAVKHSQECQIYRCSACVSLSNENSPGNSPDNGRNYFRSEAEMANHVRTVHAPVTIVNESPLRRSPVSTPVGTVTTPRCVFCGICCNTDLELQLHLASHSTSLYRCPICREGFPVEFLLDRHIAQAHQQNGDRSDARENGRIYRASRPQDETTRPQKRGRSPAFSNNNSLNQRDNNNKRPNYNTTNGTPNITTSQQCELCERAEFASEAELQAHKKLVHTPVKLQAKSLPLLSMTCAYCGEVCRSRKDLESHTRIQHASNEHGGRHKCNICDEVCPSGGILAEHKLQTHCKIQLSDTCVVCRGSLANEAQFIEHVHRHSLEGIEPQQRLDNTLPLLPAPCVVCRQTLISDLECRLHATHHLRGSSGPQISSSSPSPSQTKTQPPQQTSLSCCLCLREFSVDDFVSLPSNSIGTGGPPLRVCKPCYVRHSQGLPILSSPYEHVRQSKSERMTWSNGKDPNSWEGSRDPWDNDRCYKKDEPDKNQDGRLEAGLKDLDEIRCDECGIKFENSEEAQIHRMKEHAKSSGSSNTYTCIQCQMSFPTEDKIRQHVRKVHLESTNKASIEALRCHLCIFEANSPLQLQGHLIEHTFAGCAGLTCYICQGLFTTPIALQNHMLQQHGLGARPYDCSYCSLKFFFRIELDHHVVMVHRRNETSSPPVDVGEEIAAENRPSITENRDKSQASEEIHEGQSRSKNITVKEEIVNSPEGNDVHVDIDEADGNYEIERKREEDHLVAAKREPLGISQGEEKNSVLITTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01056279;
- 90% Identity
- -
- 80% Identity
- -