Dlut004469.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- ZFX
- Assembly
- GCA_963669185.1
- Location
- OY769904.1:28863021-28867413[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.3 1.1e+02 3.7 0.1 3 23 16 36 15 36 0.94 2 15 1.3 1e+02 3.7 3.8 1 23 922 945 922 945 0.81 3 15 0.0028 0.23 12.1 0.6 2 23 1028 1050 1027 1050 0.95 4 15 0.0034 0.28 11.8 0.1 2 23 1063 1084 1062 1084 0.97 5 15 1.4e-05 0.0011 19.3 2.1 2 23 1087 1108 1086 1108 0.97 6 15 0.013 1.1 10.0 0.3 1 23 1114 1136 1114 1136 0.95 7 15 2.6e-05 0.0021 18.5 4.5 2 23 1143 1164 1142 1165 0.95 8 15 0.12 9.4 7.0 3.7 5 23 1178 1196 1177 1196 0.97 9 15 2.3e-05 0.0019 18.6 1.5 3 23 1203 1224 1202 1224 0.97 10 15 0.013 1.1 10.0 0.5 2 23 1240 1260 1239 1260 0.97 11 15 7.1e-05 0.0058 17.1 0.7 1 20 1266 1285 1266 1288 0.92 12 15 8.8e-05 0.0072 16.8 2.7 1 23 1296 1318 1296 1318 0.99 13 15 0.0025 0.2 12.3 3.2 1 23 1324 1346 1324 1346 0.97 14 15 4.5e-06 0.00036 20.9 3.9 1 23 1352 1374 1352 1374 0.99 15 15 0.00032 0.026 15.1 7.2 1 23 1380 1402 1380 1403 0.96
Sequence Information
- Coding Sequence
- ATGGAAATCGGTGGAATTGTGGGGACTGGCGGTGGGGCCGTTGCCTGTCCCGTTTGTACCCTCTATTTGCGCGAGGGTATAAGCCTACAGAGACATTTGGACACCCATCCAAAGGAACAGGTTATAGAGGCACTAATCAAGGCTAGCTCATCCCCAACTCAAACTCCAGTGCCTGGTGCACCACCTAATGTACCAAGCACTCCAAATCCACCAGCACctcagcaacagcaacaacaacagcagcaacaacaacagcaacaacttAATTCCGGTTCTCAGATACCCTCGCAATCGCCATATCCGGTTGCGCCAGTATTCGAGTGTCCTCCTATAAACACAATGATGCCACCTCAGTTTGCCTCATTCAGTTATCAACAATTTGTCAACAATGGCACAATGATGATACCCCAATATGCAATGGCGCCGCAAGCGAATCAAATGATGCAAATGTTGTACAATCCTTATAGCATGTATCAACAACAACAGATACCAACTGTACAAATGATATCGCCAATAACAACAATACCAACAACACGAATTCGACCCGTAGTTACAGATGCGAGTGATGTAAATTCAAGAAATGTCATAATACCAAGCAGCACGACGGAAACAAAACAGATATCATCCGAGTTGCTCTCCGAGCCGGAAACCGAAAGGATATTACCGGAAATTGATCTTCCGAGGACTCCGACACCATCGGATGATGACAACGGTATAATGACAACACGCCACGAGGCCGAAGACGCGACGAGACTTCAGGTTGAGCACAGAGGACAACAGACGCAAAATTCTATGACGCAACGTATGACCTCCGAGCGTCAGGATTATCAAAATTCTCAGGATTCCATAGGAGATGCTTGCGAGAATAATCCCAATGACGAGGAGAAAACCGAGGGTCCACTTGGAGATgctcaagagagagaagagacacAGATTAACGATACACAAGTAGAATGTAACAAAGTTATAGAATTTGAGGAACCTGAGAATCGTCAATTTACCCAGGACTATGAGAATACAATGGAAAAGACAAGCAATaacgagatagagatagaaacgGAAACGGAAGAGACTAAGCTAGAGATAGAATTACCGATGGAGACGAAAGAATGCACTAATGAAACGATCGAGAGGCAGGAAGAAAGCATTGAGGAAGAGATGAAGGAAACTAGCCAACCGGAGGTCGAGCAATTGGAACGGTTACTGATAACGATAATggaatcgagttttgaggctCCAAGAGATAAAAACAACGAGACAACATCGgaaaagatggagagagatgagcaagagagaacgagCAATGAGCTTGAGGATACGGAAACAACGAATGCTCATTCTacagaagaaaagagagaggaggaggaagaagaggaagaaactattaataaaatgtacacGACCGAATTATCGGATGATACATCTTGCAAAATTATCAACGAGAACGTTGACAGTATCGATGAATTAGAGAgcaattttaataatgcaTATCGTTACAGATGTAGCTTGTCGGCTCCATCGTCGCCTGTAGttacaaaaaaactttacagAACGTGTTCACTCAGATCGGATTATGGCTCGAATGAGAATCTCAACTTTTATCCAATTGGCTTTGATGCCTCGGCGTTACAAGATCATGAAGGTGAGGAGAATAAAAACATGGAGGATAATTTTGATGAGGAAGACATGGAAATTGAGGAAATAGCGAGTCCTCATACGCCATTCGCTAAGCAAAATGATTCACTCGAGCATGTCAGATCTCACACACCATTATCAGCTATAAGTGGAATTTCGGGGCTTCGTGTACAAAACAATATTGGTAAATTTTGCTCACGCGATTCTGTGCAATCATTTTGTCCAATGGACACGGAAAGTACAAGCGGAGAGgaggacgatgatgatgatgatgatgatgatgacgatgacgaggacgaggaagaggaggagagcAACGATTCAGCAGACTCGTCAATGGCCAAACATCCGACAGATTGTTCGCAAATTGACCAAGATGGAAAATCAATCGTACTCGAGACAAATCCGAGCGAGTctcttgagagaaaaaatgaatcgaaTCAGATATATCATCAGTCGGTCATAACCGAGCACGTAAGTTCATTTCCGACCATCAATTCACAACAGGCACCATTGATAATACACGAAAATTATACAATCTCGAGTAACAACAAAACAatgcataataatttaattaatatgacGGAATTGGCCGATCCAACAACAAGCGCAGAATCAAAGAGTTTTCAAGCGAGCAAATCATTGCATCATATGCAATCGACCGAACTTTTAAATATCAACGAGGACGCTCATGCAGGACCGATGAACGTTTTTGAGTTTGATGGACTACAAATATTAGTTCCTAGTACATTCATAAGTGAATCTTCCCAAAAAGCCATTAGCGCAACAAGCCAACAATCAATGGCAAGCAGCGAAGGAGGTGCGGGCATCGATGAAGAGGTCAAGAGCGTCAATATGAGGGCCGACGAGACTATGCCACCACGTGGTGAATTGTCAGAGCAAGAGAGCAACGGTTGTACTGAACATTCGGCATGGCAGCTCTACATGGGACAAGAATCATCCCGCATGTCGACCTCTTACGATCTCATGGCACGTGAGAGCTGGGGAGAATCCGAGGGTTCCGACAACGAAACTGGAGTCCCATTGCTGGACAGTAGATCTCTCGCGACACATTTTACATCGAGCCTTTTTCTCGATCGGGACAGAAAAACACCGACAAAACGAACATTCAAGTGCTCGCACTGCAACGAAGTGTTCGATTGCCCGAAAGAGCGTCGAGTTCACAGTACGACAGTTCACAAAGAGGCCGGTCCAAGCAGCAGCAACGATCCTACCAATCAGCCCGAGGCAAAGGATATAAAACTTCTTGACGGGCGTATGAACGTATTTGATGATATATTCGTATCGGGAATTCACGTTCAACAGCCTTATCATCATCAACAGCCGTTGTTGCATCAATTACAACCACCCCAGCAGCCGGACAGTGCAAAAGTCGACGGTGATCAAAAGATCGATAGTCTGGCGATACCacaaaatttagaaatttcatGCGCAATGTGCAGTCAACGTTTCAGCAGCGAGAGATCGTTACAGGTGCACAACAGGCGTGTACATGGTACTGAGGTAGCGCGAAGACTTCAAGAAATCTCCAAATGCCAGATATGCAACGAAGAATTTCCATCGGTAATGCTCTTCAATGCTCATCTAAAGATACATCCTCTGGAGTGTTCCCAATGCGGCAAATATTTCTACAGAAAGCCAAATTTTAAGCTTCACATGAAACGACATCTTGGGATAAAACCATTTCCATGCACTGTTTGCGACAAGGCATTTTTGACGAAGCAAAAACTTGACGAGCATACAAACGGGCACACGGGCAATGCACCGGTCAAGTGTAATTTATGCAACGAAACTTTTCGTagatattcaaatttaactCAGCACAAGAATAGACATCATCTTAATATCAAGAGAAAACTCAAAGATTACATATGCCATTGCGGTGAAGTTTTTCATACGAAGAAGAAGCTCGCATGGCACAAAGAGACACACGACGAAAAGCCAAAAGCTTGCACATACTGCAACGAGAGGTTTATACACATGGCCAGTCTGACGAGACATATGAGACGTGCTCACAATCGTCGCTTCGTACCGGATGCTCAGCGCGAGAGCGAAAATGTCGAGTGCCCAATATGCAAGTGCATTTATTTGCGCTCATCATTGTCCGTACACATGAGAGTACACAATGGCGAGAGACCATACGAGTGTCAGGTGTGCTCAAAAGCCTTTAGTACCAAATGGAATTTGCAATTGCACAAATGGACCCATGCGGCACGTAGCACAAAACCTTTCAAGTGCAATCAGTGCAGCGCCGCATTTTATCGTCACAGCGATTATACGGCACACATGAATTCCCATCGCAATGTAAGACCGTACACGTGCAATTATTGCGGCGCTCAATTTATCAGAAAGTACAATTGTCTACGGCACGTTAAGGAACACGAGGAAAATAAAGCGTATACGTGTGATGTTTGCAACAAAACTTTTCATCGTTCGTACTATCTGAAGGAACATTTACGAGTACATTCGGGGGCTAGACCTTACACGTGTCACATCTGTGGTAAATCAAGTAGTACCAAGTCCAATCATAACAAACACGTTAGAATTCATCATGCGCGAGAGCCTGTAAATACGGAGAATTAA
- Protein Sequence
- MEIGGIVGTGGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSSPTQTPVPGAPPNVPSTPNPPAPQQQQQQQQQQQQQQLNSGSQIPSQSPYPVAPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYSMYQQQQIPTVQMISPITTIPTTRIRPVVTDASDVNSRNVIIPSSTTETKQISSELLSEPETERILPEIDLPRTPTPSDDDNGIMTTRHEAEDATRLQVEHRGQQTQNSMTQRMTSERQDYQNSQDSIGDACENNPNDEEKTEGPLGDAQEREETQINDTQVECNKVIEFEEPENRQFTQDYENTMEKTSNNEIEIETETEETKLEIELPMETKECTNETIERQEESIEEEMKETSQPEVEQLERLLITIMESSFEAPRDKNNETTSEKMERDEQERTSNELEDTETTNAHSTEEKREEEEEEEETINKMYTTELSDDTSCKIINENVDSIDELESNFNNAYRYRCSLSAPSSPVVTKKLYRTCSLRSDYGSNENLNFYPIGFDASALQDHEGEENKNMEDNFDEEDMEIEEIASPHTPFAKQNDSLEHVRSHTPLSAISGISGLRVQNNIGKFCSRDSVQSFCPMDTESTSGEEDDDDDDDDDDDDEDEEEEESNDSADSSMAKHPTDCSQIDQDGKSIVLETNPSESLERKNESNQIYHQSVITEHVSSFPTINSQQAPLIIHENYTISSNNKTMHNNLINMTELADPTTSAESKSFQASKSLHHMQSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWGESEGSDNETGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCNEVFDCPKERRVHSTTVHKEAGPSSSNDPTNQPEAKDIKLLDGRMNVFDDIFVSGIHVQQPYHHQQPLLHQLQPPQQPDSAKVDGDQKIDSLAIPQNLEISCAMCSQRFSSERSLQVHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECSQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01056273;
- 90% Identity
- -
- 80% Identity
- -