Basic Information

Gene Symbol
BAS1
Assembly
GCA_963669185.1
Location
OY769905.1:29380782-29383457[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.8 4e+03 -1.9 0.0 3 18 172 187 171 187 0.87
2 5 1.3e-08 1.1e-05 25.5 0.4 3 44 275 318 273 320 0.94
3 5 2.4e-10 2e-07 31.1 0.2 2 43 328 373 327 375 0.96
4 5 5.8e-12 4.8e-09 36.3 0.0 1 45 382 427 382 428 0.94
5 5 8e-09 6.6e-06 26.2 0.0 4 44 438 478 436 480 0.91

Sequence Information

Coding Sequence
ATGAGCGATATAATGAGTAATCCAGAAGACGATCGTGAATTTCTCGACGAGATAAAAGCTTTGGAGGATGTTTTGACACAAAATGACGCAGCCCCGTGTATCCCGATCGTGTCGAAAAACATCGCGACATGTAATTTGGCGAGTGAACGTCGTACAAATCCATCAAACCGAGGATTTGGCGAAGTTGAACCAAAtccgaatgaaatttcatcaaatgaatttatcgagCAGCGTCATTCGGTGTTGGAAACGAATAAAAAGCTCATCGAGTTATTACGCGAAACGAGACAAGAATTAATGACGATACTCGAGCGATGTATCctgaataaacaaataattgaggaaaaaattggcaatcgaggaaatattggaaaaagcCGCAGAGTTCTCGTGTGTACAGCAGGTATGCCTTATTTCAAGGATGGTAAACATTATCCAGCACCATGGAACGGAGATGTGCGAACAAAAATGCGCAATGGGGAGCTCCAAGTTGTCCATCTTCGTTACACGTGCTCGTGGACAGCGAAGGATCGCAATATATTGTGGCGAGCAATTCGCCAGGAGGCAGCGAGCGAAGTTCTCGAGAGTCAACAGGAGATGGGTCTCGTTCCAAATGAAAAGGACGAGGATTACGTAGCTCAGCGATCTCGCGTAACCGAATCTctaaatttgccaaaaaatttcaaatccatGATCGGACCACTCGATGCGAGAGAATTCGACTGGCTGAAAATTGCTGCGACGGATTTTGATGACAAACACACAGCTGATGAATGTCGGGTAATGTGGCGAGTATTTTTGCATCCTGACGTAAACAGATATCGATGGACCAAAGAGGAAGattcaaaaattgatacactgagcaaaaaatacaaaaaacaaaattgggaCGCTCTCGCTGGTGAATTGAACACTCGCAGAAGTGGCTATCAATGTTTCATAAGATACAACAGCGTTAATCgtataatttcattgaatgaTAACGCGTGGTCGAAGAGCGAGGATGAGAGATTACGAAAATgcgttaataaatttaaaattggcCATTACATTCCATGGGGCACCGTTGGAAGATACATGAGCGGACGTAGCAAGAGTCAAGTTTATTATCGTTGGACTTACAATACTGCGccatatttgaaaaaaggacGATTCACTCGTGACGAAGATTCACAATTAATAGAAGCGATTAGaaaatatggtaaaaatttttgtaaaatatcaaattgCGTTATGCCAAATAGATCAAGCGTACAGCTTGCCGATCATTATCATACACTCGTAATGAGAAAACATGGAGGACAAAATATATGGAAGATTAGCGACGATGCTCGTTTACTCGCATTGTACGATCAATTTGGCGCCGATTGGTCGAACATTGCTCAAAAACTTCCTGGAAAAACGAGAACTCAGGCGAGACATCGTCATAATTCGATATTGCGCTATTTTGATAAGGGCATCTCGTTGTACGAGATACCACGTGATTACAagaaagatggaaaatttaatgataattgtcCCGATGAGGATTCTGAGCTTTTGGAAATCATTGAGAGTAAAAGAATCAAAAGgctgagggaaaaaaatgtaactgcGATGGATCCAATTGATCGTGAGCTTATTCAGTATTTTCAGCTCATCCCAGAAGCATCGGCACCTGGAAGAAAACGTAAATATTACAGAGATGACGAGCTCAAGGATGCAACGAGAAAATTgtggattatttttaaaactctCGGAGCCAAGATCGTAATGCCAAAagatattgatgaaaaatctcttACGGAAAAGGATAAACAATTGTTAAAGTCACTCGAGGATCATCAACAATTGCAACTCGATTATGAGGGATGCTCAAAGAGTTCCATTCAATATGGAGGAATAATTGGTGATCAGACGAACAAGCGAAATaaggaaaaacattttacacCTCTTTGTCCTGGTGATTGTAATCTAAAGGAGAAAATacgatggaacgataaaattgattatcaaCAACCAAAAAGCATCGATCACTGCAATatgaaattaatcatgaaaattaatactcCATCAGAGATGATTGATCTCATTGGTGATGAGAATAATTACCAATTTGACAAACTAATGAAATTGTTGCGTTTGCGAAAAATGGGAACATGCGAGACAAAAATTGTagagaaaatttatgtattaGGACCAAAAGAATTATCAACGATCGTGATTGAAGATTTTCCACGAGAGTCTACGATATGCGATAATGAACGTACGaataaatcgaatgaaaataaaaacaaaaacaactcAAACAAAGGCAAAGTTTGGAGCTCCAGTATGTGCGAAGGAATAATAAGAAATTTGGAAAGACctgttaattttatcgagcCGAATTATCACACATTGATGGCTTTGCAGCACATCACCCTAACCGATAAATTTAGCCTCAAACCAAATCTTCACGATGGTCCATTTACAACGAGCGAGGAGAGCATCAgatcgatgaaattatttaaaaaaagattaacacaattgtttaaatttccTATTGGCTTGTCTCATGTTCTGAGACCGGAAATATGCGTGAAACGAAATGTACTTGATTCTGACAGAAAAAACGACGCCGCGAGCGCTTCGAATGATATCGCTGAGGATGGTACAAAAACGCTCCAGCCACCCAGTAAAAAGAAACGATTTtaa
Protein Sequence
MSDIMSNPEDDREFLDEIKALEDVLTQNDAAPCIPIVSKNIATCNLASERRTNPSNRGFGEVEPNPNEISSNEFIEQRHSVLETNKKLIELLRETRQELMTILERCILNKQIIEEKIGNRGNIGKSRRVLVCTAGMPYFKDGKHYPAPWNGDVRTKMRNGELQVVHLRYTCSWTAKDRNILWRAIRQEAASEVLESQQEMGLVPNEKDEDYVAQRSRVTESLNLPKNFKSMIGPLDAREFDWLKIAATDFDDKHTADECRVMWRVFLHPDVNRYRWTKEEDSKIDTLSKKYKKQNWDALAGELNTRRSGYQCFIRYNSVNRIISLNDNAWSKSEDERLRKCVNKFKIGHYIPWGTVGRYMSGRSKSQVYYRWTYNTAPYLKKGRFTRDEDSQLIEAIRKYGKNFCKISNCVMPNRSSVQLADHYHTLVMRKHGGQNIWKISDDARLLALYDQFGADWSNIAQKLPGKTRTQARHRHNSILRYFDKGISLYEIPRDYKKDGKFNDNCPDEDSELLEIIESKRIKRLREKNVTAMDPIDRELIQYFQLIPEASAPGRKRKYYRDDELKDATRKLWIIFKTLGAKIVMPKDIDEKSLTEKDKQLLKSLEDHQQLQLDYEGCSKSSIQYGGIIGDQTNKRNKEKHFTPLCPGDCNLKEKIRWNDKIDYQQPKSIDHCNMKLIMKINTPSEMIDLIGDENNYQFDKLMKLLRLRKMGTCETKIVEKIYVLGPKELSTIVIEDFPRESTICDNERTNKSNENKNKNNSNKGKVWSSSMCEGIIRNLERPVNFIEPNYHTLMALQHITLTDKFSLKPNLHDGPFTTSEESIRSMKLFKKRLTQLFKFPIGLSHVLRPEICVKRNVLDSDRKNDAASASNDIAEDGTKTLQPPSKKKRF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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